mRNA_P-littoralis_Contig1.23.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE) HSP 1 Score: 1575 bits (4078), Expect = 0.000e+0 Identity = 862/1018 (84.68%), Postives = 905/1018 (88.90%), Query Frame = 2
Query: 65 MKHARHKGSRQQRRRSSLSIRVGSAAAMLAAAWSLPHRGCHALRVA------SGPGCQYSRGCLGTAAQGARRTTASLAAGFVPGGGRARRMGVAADVTGAGWPSFSSXXXXXXXXXGFFVRNRLGXXXXXXXXXXXXAAAHVSGAMRMVSGGDSDEGKFFTDPDAPEVVDGVGPPGPLAGGDQVVNVGLEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRDPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYELSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPRE--------DGDAEDQGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQLEDTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDGIKDVALVPEIDEHEAA 3076
MK ARHK SRQQR+R ++ RVG+AAA+LAAAWSLPHR C ALR SG G QY R +GTAAQ ARRTTASL GFVPG XXXXXXXXX XXXXXXXXXXXX SDE +FFTDPDAP VDGVGPPGPL GGDQVVNVGLEAEIK+SFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNL PEGTHRKCARVVGEVLGKYHPHGD AVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLS VA+DTLLTDINLDTVDM TNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIR+P+LPD++LFR+LPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIE KGR +RNAVVVTELPYQVNKS+LLQ+MAEMVNDKKL+GISDLRDESDRDGVRVV+ELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRF LRAAIQSFVDFRFTTVRRR+AFELGKVRAREHIVQGML+ALGMIDAVI+LVRASTDT MARDGLMA PY LS EQADAILALRLGRLTSMEEGKL+AEA DLK TMERL+GVM EDSKVMDIIVEELTEAKNKHAVPRRT+IKPDEGEL EEDLLAND SVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSD+GVAYGIRAFQVPVGSRTAKGVPVPQVLP+AGDEEIASVLAVDDFREDE+LVLLTQKGYIKRTPLAAF+STSSRGLIIISLGEDDTLRWVKRC D+DGI++GSKQGYATRFLAN +DLRPSGR+SRG KAMNFR+ DVPVDIGV+PRE D +++G SLLVLTTRGYGKRV +NEFKTTRRGGKGVIALKLR++LEDTLACFRIVGADDEIMLST QGTIVRQRAGAIA+QSRTATGVIVQKLD NDGIKDVALVPEI E AA
Sbjct: 1 MKPARHKVSRQQRQRRWMTARVGNAAAVLAAAWSLPHRSCQALRAPCSSSAISGAGYQY-RSYVGTAAQRARRTTASLTGGFVPG-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDESQFFTDPDAPSEVDGVGPPGPLVGGDQVVNVGLEAEIKTSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLNPEGTHRKCARVVGEVLGKYHPHGDMAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSSVAKDTLLTDINLDTVDMTTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSRRNAVVVTELPYQVNKSSLLQKMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDAVIELVRASTDTPMARDGLMAEPYGLSQEQADAILALRLGRLTSMEEGKLKAEAEDLKATMERLEGVMNEDSKVMDIIVEELTEAKNKHAVPRRTMIKPDEGELQEEDLLANDSSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPVGSRTAKGVPVPQVLPIAGDEEIASVLAVDDFREDEYLVLLTQKGYIKRTPLAAFRSTSSRGLIIISLGEDDTLRWVKRCCDDDGIVIGSKQGYATRFLANKKDLRPSGRTSRGVKAMNFRDEDVPVDIGVVPREAAAATAGDDAGVKEEGHSLLVLTTRGYGKRVALNEFKTTRRGGKGVIALKLRQKLEDTLACFRIVGADDEIMLSTAQGTIVRQRAGAIARQSRTATGVIVQKLDANDGIKDVALVPEISEDAAA 998
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA) HSP 1 Score: 1074 bits (2777), Expect = 0.000e+0 Identity = 544/808 (67.33%), Postives = 658/808 (81.44%), Query Frame = 2
Query: 641 MQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRDPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYELSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPREDGDAEDQGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQ---LEDTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDGIKDVALVPE 3055
MQYAMS ILGRALPDVRDGLKPVHRRILYAM+GL L PE +RKCARVVGEVLGK+HPHGD AVYDALVRMAQDFVM+APLI GHGNFGSID DP AAMRYTE KL+ VARD LL D+ +DTVD + NFDGNE+EPVVLP+RLP+LL+NGATGIAVGMATNIPPHNLGE+ A +ALI+DP+LP+ LF+I+PAPDFP+GG IMGLAGARK+YTTSNG VTLRATTHIE I + RP RNAV+VTE+PY VNK+ALL+++A +VN+KKLDGI+DLRDESDRDG+RVVIELKRDA PQVV+NNL+KKTQLQTSFSGNMLA+G+DG +P RF LRA + SF+ FRF TVRRR+A+EL KV+AR+HIV+GML AL ++ VI+LVR S D AR L + LS EQADA+LALRLGRLT EE KL+ E DL + ++RL G+M++D V ++V+EL E K KHAVPRR++IK DEGEL++EDLLAND S++V+T +GYIKRMPLEEF AQ RGTRGKAGAK+S D V FFTC+DH+T+LFVSDRGVAYG+RAFQVP SRTAKGVPVPQVLPL+ DE I+SV+ V++F++DE+LVLLT++G+IK+T LAAF+S ++RGL IISL + D L WVK C + D II+G++QG A RF A+ LRPSGR+SRG KAM F+ GD PVDI +LP D G+SL+ +T +GYGKRV +EFK RRGG GVIA K + + +D L R++ D+++LST QGTIVRQ A +++Q RTATGV VQKLDE D I +A+V E
Sbjct: 1 MQYAMSTILGRALPDVRDGLKPVHRRILYAMHGLGLQPESGYRKCARVVGEVLGKFHPHGDVAVYDALVRMAQDFVMAAPLIAGHGNFGSIDADPPAAMRYTESKLAPVARDALLADVAMDTVDFVPNFDGNEQEPVVLPARLPILLLNGATGIAVGMATNIPPHNLGELTDACVALIKDPELPEADLFKIVPAPDFPSGGTIMGLAGARKMYTTSNGSVTLRATTHIESIAQRTRPPRNAVIVTEMPYMVNKAALLEKIAALVNEKKLDGIADLRDESDRDGIRVVIELKRDAVPQVVQNNLYKKTQLQTSFSGNMLAIGADGLQPQRFTLRALLDSFLAFRFKTVRRRTAYELAKVQARDHIVEGMLIALARVEEVIELVRGSKDNATARQHLTNKDFGLSTEQADAVLALRLGRLTKAEEIKLKKEHTDLTKEIKRLLGLMQDDESVRQVMVKELLELKAKHAVPRRSIIKKDEGELNDEDLLANDNSIIVITRSGYIKRMPLEEFQAQRRGTRGKAGAKLSDPGDEVAQFFTCRDHNTVLFVSDRGVAYGLRAFQVPTASRTAKGVPVPQVLPLSADERISSVIPVEEFKDDEYLVLLTKRGWIKKTSLAAFQSLTARGLTIISLEDGDELLWVKTCTEADSIIIGTQQGMAVRFAASADQLRPSGRTSRGVKAMKFKPGDYPVDIDILPGADDQELPDGKSLVAVTVQGYGKRVGADEFKIQRRGGMGVIATKFKTKRGAAQDALCALRVIANGDQLLLSTAQGTIVRQPAATVSEQGRTATGVRVQKLDEGDEIASIAVVHE 808
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA) HSP 1 Score: 1019 bits (2636), Expect = 0.000e+0 Identity = 521/832 (62.62%), Postives = 654/832 (78.61%), Query Frame = 2
Query: 590 GDQVVNVGLEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRDPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKG-RPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYELSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAV-DDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPRE-----DGDAE----DQGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQLEDTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDGIKDVALVP 3052
GD+V+ L E+ SSFMQYAMS ILGRALPD RDGLKPVHRRIL+AM+ LNL PE ++RKCARVVGEVLGKYHPHGD +VYDALVRMAQDFVMSAPL+ GHGNFGS+D+DPAAAMRYTECKLS +ARD LL DINLDTVD NFDGNE EP+VLP+R+P+LL+NGATGIAVGMATN+PPHNLGEV+ T+ALI DP L D+KL R++PAPDFPTGG IMGL G RKLYT +G + +RA TH+E I + G R RNA+VVTELPYQVNK++LL+++A+MVN+KK++GISDLRDESDR+G+RVVIELKRDA P VVENNLFKKT LQ+SF GN LAL +DG +P R LR ++QSF+DFRF T+RRR+ EL K+ +R+H+V+G+++AL ID V++LVR + DT A+ LM + Y++S QA AILAL LGRLT++E+ KLRAE L+ +E +M++D KV D++ +EL E + KHAVPRR+ I+ G L E DLLANDRSV++VT AGYIKRMPL++F Q RGTRGKAGA+MS D D+V HFF C DHD ++F+S++GVA+GIRAFQVPV SR +KGVP+PQVLPL+ D+ ++SV+ + + F+ DEFLVLLT++G+IK+TP+ AFK +SRGLI ISLGE DTL W +RC D+D I++ +++GY+ RF + DL+P+GR+SRG A+ R+ D VDI VL + DG + GQ LL +TT GYGKRV + FK RRGG GVIA+K + D+LAC R D E++LST +GTIVRQR AIA QSRTATGV VQ+LDE + IK VA++P
Sbjct: 129 GDKVLPTELNLELSSSFMQYAMSTILGRALPDARDGLKPVHRRILFAMHVLNLQPESSYRKCARVVGEVLGKYHPHGDASVYDALVRMAQDFVMSAPLVAGHGNFGSVDDDPAAAMRYTECKLSLLARDALLKDINLDTVDFAPNFDGNEVEPLVLPARVPMLLLNGATGIAVGMATNVPPHNLGEVLDGTLALIEDPSLSDDKLLRLIPAPDFPTGGDIMGLEGPRKLYTNGSGSIVMRAKTHMETIPMGGGRQVRNAIVVTELPYQVNKASLLEKIADMVNEKKMEGISDLRDESDREGIRVVIELKRDAMPSVVENNLFKKTALQSSFPGNFLALANDGRQPQRLTLRESLQSFIDFRFKTIRRRTQHELSKLESRDHVVEGLIRALDRIDDVVELVRRAKDTAAAKATLMGSQYDMSEAQAQAILALTLGRLTALEDAKLRAEREQLRGQIEDFQAMMRQDEKVFDVMKQELREIRAKHAVPRRSSIRAHAGALTELDLLANDRSVMMVTEAGYIKRMPLDDFEQQRRGTRGKAGARMSQD-DLVNHFFACNDHDHVVFISEKGVAFGIRAFQVPVASRVSKGVPLPQVLPLSSDDHVSSVIPLGESFQADEFLVLLTKQGFIKKTPVDAFKKLTSRGLIAISLGEGDTLGWARRCTDQDDILISTRKGYSMRFASA--DLKPTGRTSRGCSAIKLRKTDEMVDITVLRPDAAVDVDGPGDCGSGSNGQYLLAVTTAGYGKRVSADSFKVQRRGGMGVIAIKFKAGSGDSLACMRACSDDYEVVLSTQKGTIVRQRVAAIALQSRTATGVRVQRLDEGNIIKSVAMLP 957
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC) HSP 1 Score: 981 bits (2536), Expect = 0.000e+0 Identity = 496/854 (58.08%), Postives = 645/854 (75.53%), Query Frame = 2
Query: 596 QVVNVGLEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRDPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRP-----KRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYELSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPREDGDAEDQGQS-----LLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQLE---------------------DTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDGIKDVALVPEIDE 3064
QV++V LE+E+ +SFM YAMSIILGRALPD RDGLKPVHRRIL+AM GLNL+PE + RKCARVVGEVLGKYHPHGD AVYDALVRMAQDFVMS PL+ GHGNFGS+D DP AAMRYTECKL+ ++RD LL D+++DTVD + NFDGNE EP +LP++LP LL+NGATGIAVGMATNIPPH LGE+V A IALI++P L DE+LF ++PAPDFPTG I+GL G RKLY T NG V +RA TH+E I+ R R A+VVTELPY VNKS LL+RMA MVN+KKL+GI+DLRDESDRDG R+VIELK+DA VV+NNLFKKTQLQTSF+GN+L+LG DG +P R LR+A+Q ++DFRF T+RRR+ FELG+ + R H+V+G+LKAL ID VID+VR + D + AR+ L +P++LS EQA+A+L L L RLT++EE KL+ E +L+ + L+ +M+EDSKV ++ EL E K K+ RR+ I + +L EEDL+ NDRSV++VT +GY+KR+P+EEF Q+RGTRGK GAK+S D D V HFF C DHDT+LFVS+RGVA+ ++A+QVP+ SRTA+GVP+PQVLP+A D+ I SVL + F+EDE+LVLLT+KG+IK+TPLAAF + S+RGL +I+L DD LR+V+RC D+D +I+ ++ GYA RF + LRP+ R+SRG K++ R+GD D+ +LP G+ +D G+ LL +T G GKR+ + F+ RGG GVIA K + Q + D ++C R+ +DEIMLST GT++RQ+AG I+ Q RTATGV+VQ+L + D ++ V++VPE ++
Sbjct: 24 QVMDVELESELSASFMSYAMSIILGRALPDARDGLKPVHRRILWAMQGLNLSPESSFRKCARVVGEVLGKYHPHGDVAVYDALVRMAQDFVMSGPLVNGHGNFGSVDGDPPAAMRYTECKLTPLSRDALLADVSMDTVDFVANFDGNEVEPTILPAKLPFLLLNGATGIAVGMATNIPPHQLGELVDACIALIKNPSLSDERLFSLIPAPDFPTGALIVGLEGVRKLYKTGNGAVVMRARTHVEEIKKTNRKGGQLGSRTAIVVTELPYMVNKSVLLERMATMVNEKKLEGIADLRDESDRDGTRIVIELKKDARATVVQNNLFKKTQLQTSFAGNLLSLGDDGKQPVRLTLRSALQIWLDFRFRTIRRRTNFELGRRKQRAHVVEGLLKALAQIDDVIDVVRQAKDANQAREALQGSPFDLSEEQAEALLRLTLARLTALEEEKLKTELEELRARISELEALMREDSKVYHLMETELKELKRKYGGQRRSEIIHEAADLTEEDLIPNDRSVLIVTHSGYVKRLPVEEFDPQSRGTRGKLGAKISDD-DSVAHFFACNDHDTLLFVSNRGVAFTVKAYQVPLSSRTARGVPLPQVLPIAADDRITSVLPITQFKEDEYLVLLTKKGWIKKTPLAAFANVSNRGLTLIALEPDDVLRFVRRCTDDDSVIIATRGGYAIRFRTDGEQLRPTSRTSRGVKSLKIRDGDQVADLDILP---GNEDDDGKGANKFFLLAVTENGCGKRIKPSHFRLQSRGGLGVIATKFKPQGKGNGGNTSGNKASSAEKKKLGGDAVSCMRVCRLNDEIMLSTAGGTVLRQKAGEISLQGRTATGVLVQRLPDGDEVQSVSVVPEAEQ 873
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: A0A7S4MTJ4_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTJ4_9STRA) HSP 1 Score: 928 bits (2398), Expect = 0.000e+0 Identity = 483/855 (56.49%), Postives = 628/855 (73.45%), Query Frame = 2
Query: 581 LAGGDQVVNVGLEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIR-----DPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYE----LSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKM-------SSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPRE---DGDA-----EDQGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQLEDT-LACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDG--IKDVALVPEIDE 3064
+A ++ L EI +SFMQYA+SIILGRALPD RDGLKPVHRRILYAM+GLNL P +HRKCARVVGEVLGKYHPHGD AVYDALVRMAQDF PLI GHGNFGS+D DPAAAMRYTEC+L+ V+ + LL D+ D VD + NFDGNE EP VLP+RLP+LL+NG GIAVGMATN+PPHNLGE++ A +AL +L D L+R++P PDFPTG RIMG +G++KLY+T NGGV +RA TH+E I KG R+A+VVTELPYQVNK+ALL+R+A+MVN+KK++G++DLRDESDRDG+RVVIELKRDA VV+NNLFKKT LQTSFSGN LAL GT P RF LR+A+ +F+DFRF T+RRRSA++L KV AR HIV+G+LKAL D VI+ VR++ D ARD LM + LS +QADA+L L+LG+LT + + KL E L + L+ +++ DS V ++++E + K+K VPRRT I+P+EGEL+E DL+ N RSV+VVT GY+KRMPL+ F +Q RGTRGK G S++ + V H FTC DHDT+L V+ RG+AYG+RAF+VP G+RTAKGVP+P VLP+ D+ + SVL + F EDE+ VL T++G+IK+TPLAAF+ +SRGLI +L + D LRW + C D+D I++GS +G ATRF A LR +GR+SRG ++M REGD D+ VL ++ D D+ +D + +L +T+ GYGKR+ ++F+TT RGG GVIA+K + ED ++C RIV DDE+++ T +G +VRQ+ I+ QSR+ATGV+VQK+D G I V++VP+ +E
Sbjct: 114 MASDPSAPSIDLSDEISNSFMQYALSIILGRALPDARDGLKPVHRRILYAMHGLNLGPSSSHRKCARVVGEVLGKYHPHGDGAVYDALVRMAQDFSTGTPLIDGHGNFGSVDADPAAAMRYTECRLTPVSNEALLGDLGRDAVDFIPNFDGNEAEPTVLPARLPVLLLNGCAGIAVGMATNVPPHNLGELMDACVALTHAAEDGQDELSDGALYRLVPGPDFPTGARIMGTSGSKKLYSTGNGGVVVRAVTHVEQIVSKGGKPRSAIVVTELPYQVNKAALLERIADMVNEKKIEGVADLRDESDRDGIRVVIELKRDAVAAVVQNNLFKKTSLQTSFSGNFLALMGSGTIPQRFTLRSALDTFLDFRFKTIRRRSAYQLKKVDARIHIVEGLLKALARADDVIETVRSAPDQASARDALMDDTGDDGLGLSRDQADAVLKLQLGQLTRLNKSKLLDEKDTLSRSKAELEELLEVDSAVRSLMMDEFRDLKDKFGVPRRTQIEPEEGELNEIDLVKNSRSVIVVTRGGYVKRMPLKTFGSQKRGTRGKKGTSSAATAGSASAEDNEVSHCFTCNDHDTLLMVTQRGIAYGVRAFEVPTGTRTAKGVPIPSVLPVKADDVVTSVLTLSSFSEDEYAVLATERGWIKKTPLAAFEKLTSRGLIAATLEDGDRLRWCQICTDDDDILIGSTKGMATRFEAEK--LRATGRTSRGVRSMKLREGDTIADMNVLTKKKKGDDDSPSSASKDGSEYVLAVTSSGYGKRIATDDFRTTARGGVGVIAMKFKAANEDDHISCLRIVHEDDEVLVITARGIMVRQKVRDISCQSRSATGVLVQKVDVEGGDHISSVSIVPKYEE 966
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: A0A7S4VAS9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAS9_9STRA) HSP 1 Score: 908 bits (2346), Expect = 1.660e-314 Identity = 469/826 (56.78%), Postives = 608/826 (73.61%), Query Frame = 2
Query: 614 LEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALI--RDP--DLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYE---LSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHD-VVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPREDGDAEDQGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQLEDT--LACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDG--IKDVALVPE 3055
L EI +SF+QY++SIILGRALPD RDGLKPVHRRILYAM GL L + HRKCARVVGEVLGKYHPHGDTAVYDALVRMAQ F PLI GHGNFGSID DP AAMRYTEC+L+ VA + LL DI DTVD ++NFDGNE EP VLP++LPLLL+NG +GIAVGMATN+PPHNL E++ A IA+I RD ++ D++L RI+P PDFPTG IMG++ ++LYTT NGG+ +RA TH+E + + A+VVTELPYQVNK+ LL+++A +VNDKKL+GISDLRDESDRDG+RVVIELKRDA P VV+NNLFKKT LQT+FSGN LAL GT P RF LR+A+ F+DFR T+RRRSAF+L +V+ R HIV G+L AL +ID VI+++R++ D AR LM E LS EQADA+L L+LG+LT + +GKL E L+ + + L+ ++ +D+ V D++ +E K +PRRT I+ DEGEL++ DL+ N RSV+VVT GYIKR+PL+ F +Q RGTRGK ++ D V H FTC DHDT+L V+ +G+AYG+RAFQVP SRTA+GVP+P VLP+ D+ I S+L V +F +DEF VL T+ G+IK+TPLAAF++ +SRGLII +L + D LRW ++C D + I+VGS+ G AT F A LRP+GR+SRG ++M +EGD D+ +L + D + +G+ +L +T+ GYGKR+ +EF+T RGG GVIA+K + ++T ++C RIV DDE++ T QG IVRQ+ I Q R ATGV+VQK+D G I V++VP+
Sbjct: 131 LPDEISNSFLQYSLSIILGRALPDARDGLKPVHRRILYAMNGLGLYSDSGHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQSFSTGTPLIDGHGNFGSIDADPPAAMRYTECRLTKVATNALLDDITSDTVDFISNFDGNEMEPTVLPAKLPLLLLNGCSGIAVGMATNVPPHNLNELMDACIAMIDARDEGEEVSDQELVRIVPGPDFPTGASIMGMSNIKQLYTTGNGGIVVRAVTHVETGGDGRKSGKTAIVVTELPYQVNKAGLLEKIATLVNDKKLEGISDLRDESDRDGIRVVIELKRDAVPAVVQNNLFKKTPLQTTFSGNFLALMGSGTVPRRFTLRSALDCFLDFRIETIRRRSAFQLRRVKNRAHIVDGLLLALNVIDEVIEIIRSAPDQMTARVELMDPGNERLSLSREQADAVLRLQLGQLTRLNKGKLTDERKTLEASRKELEKLLSDDNAVRDLMRDEFENLKGTFGIPRRTKIEADEGELNDIDLIRNSRSVIVVTRGGYIKRLPLKTFESQGRGTRGKKSTTSNASQDNEVAHCFTCNDHDTLLMVTQKGIAYGLRAFQVPAASRTARGVPIPSVLPVKADDVITSILPVAEFTKDEFCVLATENGWIKKTPLAAFENLTSRGLIIATLEDGDRLRWCEKCTDNENILVGSRHGMATTFEAAK--LRPTGRTSRGVRSMRLKEGDTVADVSILKQSGTDKDQRGEFVLAVTSNGYGKRIRTDEFRTQARGGVGVIAMKFKTNQKETDQISCLRIVKEDDEVLFITAQGVIVRQKVADIPSQGRAATGVLVQKVDIEGGDHISSVSIVPK 954
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: B8BXG7_THAPS (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXG7_THAPS) HSP 1 Score: 886 bits (2289), Expect = 4.930e-308 Identity = 466/822 (56.69%), Postives = 596/822 (72.51%), Query Frame = 2
Query: 641 MQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRD-----PDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEV---KGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYE---LSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMS-SDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPREDGDAEDQGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRK-QLEDTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLD--ENDGIKDVALVPEID 3061
MQYA+SIILGRALPD RDG+KPVHRRILYAM GL L+P G++RKCARVVGEVLGKYHPHGDTAVYDALVR+AQ F + PLI GHGNFGSIDNDPAAAMRYTEC+L+ +A +TLL DI +DTV+ + NFDG+E EP VLP+++P+LL+NG GIAVGMATN+PPHNLGE++ A +AL + ++ D KL +I+PAPDFPTG I+G +G+R LYTT NGGV +RA H+E + K + RNA++VTELPYQVNK+ALL+R+A +VN+KKL+GI+DLRDESDRDG+R+VIELKRDA VV+NNL KKT LQT+FSGN LAL GT P RF LR A+ F+DFRF T+R + AF+L KV R HIV G+L AL D VI +VR + D AR LM+T LS QADA+L L+LG+LT + KL E L E+ L ++ D+ V D ++EE K + PR+T I PDE + + DL+ N+RSV+VVT GYIKRMPL+ F +QNRGTRGK G + SD + V H FTC DHDT+L + GVAYG+RA+QVP G RTA+G P+P VLP+ D+ I SVL V +F ++EF+VL T+ G+IK+TPLAAF+ + RGLII +L + D L W ++C D D I+VGS +G ATRF A DLRP+ R+SRG K+M ++GD D+ VL +ED + +LV+TT GYGKRV EF+TT RGG GVIA+K + +++D ++ R+V DDEI+L T+QG IVRQ+ I+ Q R ATGV+VQK+D D I V++VP+ D
Sbjct: 1 MQYALSIILGRALPDARDGMKPVHRRILYAMNGLGLSPSGSYRKCARVVGEVLGKYHPHGDTAVYDALVRLAQPFSTNIPLIDGHGNFGSIDNDPAAAMRYTECRLTRIAAETLLDDILMDTVEFLPNFDGSEYEPSVLPAKVPILLLNGGAGIAVGMATNVPPHNLGELMDACVALTKGRNEGGEEVTDGKLLQIIPAPDFPTGACIIGKSGSRSLYTTGNGGVVMRAVMHLEEVPTSSGKKKSTRNAIIVTELPYQVNKAALLERIAILVNEKKLEGIADLRDESDRDGIRMVIELKRDAVAAVVQNNLLKKTSLQTTFSGNFLALFGGGTNPQRFTLREALDCFLDFRFQTIRNKCAFQLDKVENRAHIVAGLLIALESTDEVIAIVRNAPDQASARAALMSTDNPKLGLSSAQADAVLKLQLGQLTRLNGDKLNDEKKTLDESQTNLRNLLTNDAAVRDTMLEEFMAMKKRFGTPRKTKILPDEEDKADIDLVQNERSVIVVTRGGYIKRMPLKTFESQNRGTRGKRGTSNTISDDNAVAHCFTCNDHDTVLMTTQSGVAYGLRAYQVPEGGRTARGAPIPSVLPVKSDDVITSVLPVSEFSKNEFIVLATEYGWIKKTPLAAFEKLTQRGLIIATLADGDRLNWCEKCTDNDDILVGSTRGQATRFKAA--DLRPTARTSRGVKSMTLKKGDTIADMNVLRKED-------KFVLVVTTEGYGKRVLTEEFRTTARGGSGVIAIKFKAGRVDDRISTMRVVNEDDEILLITSQGVIVRQKVSDISCQGRAATGVLVQKVDVRSGDSISTVSIVPKED 813
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: B0CDP0_ACAM1 (DNA gyrase subunit A n=5 Tax=Acaryochloris TaxID=155977 RepID=B0CDP0_ACAM1) HSP 1 Score: 887 bits (2291), Expect = 1.470e-307 Identity = 463/855 (54.15%), Postives = 617/855 (72.16%), Query Frame = 2
Query: 593 DQVVNVGLEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRDPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYELSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGD--VPVDI-----------------------GVLPREDGDAEDQ------GQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRK-QLEDTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDGIKDVALVPEID 3061
D+++ L E+ S+++YAMS+I+GRALPD RDGLKPVHRRILYAMY L LTP+ RKCARVVGEVLGKYHPHGDTAVYDALVRMAQDF M PLI GHGNFGSIDNDP AAMRYTEC+L ++ D+LL DI +TVD NFDG+++EP+VLP+R+P LLING++GIAVGMATNIPPHNLGEV+ +ALI +P++ D +L +I+P PDFPTGGRI+G AG R+ YTT G +T+R IE +E GRP R A+++TELP+Q NK+AL++R+AE VNDK+L+GISD+RDESDRDG+R+VIELKRDA PQVV NNL+K+T +QT+F NMLAL G P LR + F++FR + RR+ F+L K + R+H++QG+L AL +DAVI L+R + D+ +AR LM + LS QADAIL ++L RLT++E K+ E DL+E + L+ ++ +V++II E+TE K K A PRRT+I+ + +L + DL+AND++V++VT GY+KRMP++ F AQ+R TRG+AGAK+ D D V+HFF C DHD++LF SDRGV Y +RA+Q+PV SRTA+GVP+ Q+LP+ +E+I SV+ V +F EDE+LV++T G+IK+T LAAF + + GLI ISL E D LRWV+ R ED I++GS++G + F A+ + LRP GR++RG +AM REGD + +DI VL +DG+ E+ G +LV+TT G+GKRV + +F+ R GKGV A K +K + D LA RIV A+DE+ML T++G ++RQ I+ QSR ATGV VQ+LDE+D I VALVP D
Sbjct: 10 DRIILTDLRDEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMYELGLTPDRPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRMPLINGHGNFGSIDNDPPAAMRYTECRLQALSTDSLLPDIEQETVDFGDNFDGSQQEPLVLPARIPQLLINGSSGIAVGMATNIPPHNLGEVIDGLVALIHNPEITDLELMKIIPGPDFPTGGRILGTAGIREAYTTGRGSITMRGVAEIETLEQSGRPDREAIIITELPFQTNKAALIERIAENVNDKRLEGISDIRDESDRDGMRIVIELKRDAYPQVVLNNLYKQTPIQTNFGANMLALV--GGDPQLLTLRQFLSVFLEFREDAILRRTRFQLRKAQERDHLLQGLLIALDNLDAVIQLIRQAADSAVARQELM-DGFGLSDTQADAILQMQLRRLTALEAEKIEREHQDLQERIADLEDILARRERVLEIIETEVTELKTKFASPRRTLIEANLADLDDIDLIANDQAVILVTEQGYVKRMPVDTFNAQSRATRGRAGAKIKED-DAVEHFFGCCDHDSVLFFSDRGVVYCLRAYQIPVSSRTARGVPLVQLLPIPREEKITSVIPVSEFSEDEYLVMMTAGGFIKKTALAAFSNIRANGLIAISLEEGDLLRWVRLTRAEDSIVIGSRRGMSIHFRADHQQLRPLGRATRGVRAMRLREGDEFIGMDILSSAVVETLGNATDADDEETDDPDVLVEDDGNEEESETVEQPGPWVLVITTNGFGKRVPVAQFRLQNRAGKGVTATKFKKLKTPDQLAALRIVNAEDELMLVTSRGIVIRQAVTDISSQSRAATGVRVQRLDEDDYIAAVALVPPED 860
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: B1WTN4_CROS5 (DNA gyrase subunit A n=11 Tax=Oscillatoriophycideae TaxID=1301283 RepID=B1WTN4_CROS5) HSP 1 Score: 885 bits (2286), Expect = 6.120e-307 Identity = 452/851 (53.11%), Postives = 617/851 (72.50%), Query Frame = 2
Query: 593 DQVVNVGLEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRDPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYELSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPRED----GDAED------------------QGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQLEDTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDGIKDVALVP---EIDEHE 3070
D+++ L E+ S+++YAMS+I+GRALPD RDGLKPVHRRILYAMY L LTP+ RKCARVVGEVLGKYHPHGDTAVYDALVRMAQDF M +PLI+GHGNFGS+DNDP AAMRYTEC+L ++ + LL DI DTVD NFDG+++EP+VLP+R+P LL+NG++GIAVGMATNIPPHNLGE++ TIALI +PDL +++L +I+P PDFPTGG+I+G +G Y T G +T+R IE IE +GRP R A+++T+LPYQ NK+AL++R+A++VN+K++DGISD+RDESDRDG+RVVIELKRDA P+VV NN++K+T +Q +F NMLAL + +P ++ +Q F+DFR T+ RR+ +EL K R+H++QG+L AL +DAVI L+R + DT A+D L+ + LS QADAIL ++L RLT++E K+ AE +L+ + L ++ ++ II +ELT+ K HA PRRT I D+GE+ + DL+AN+++++++T GYIKRMP+ F AQ R TRGKA AK+ D DVV+HF TC DHD +LF SDRGV Y + A+Q+P SRTA+G+P+ Q+LP+ DE+I S++AV +FRED FLV+LT+ GYIK+T L+AF + + GLI ISLG+ D LRWV+ R+ED II+G+++G A F A+ + LRP GR++RG KAM ++GD + + VLP + GDA + +G +L +T GYGKRV +++F+ RR G GV A+K + + D LA +V A+DE+M+ + +G I+RQ AI+ QSR ATGV VQ+LD++D I VALVP E DE E
Sbjct: 6 DRIIPTDLSNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMYELGLTPDRPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLIEGHGNFGSVDNDPPAAMRYTECRLQALSTNALLRDIEADTVDFADNFDGSQQEPIVLPARVPQLLLNGSSGIAVGMATNIPPHNLGELIDGTIALIHNPDLSEKELIKIIPGPDFPTGGQILGRSGIHDAYMTGRGSITMRGVAQIETIEQRGRPDREAIIITQLPYQTNKAALIERIADLVNEKRIDGISDIRDESDRDGMRVVIELKRDAYPRVVLNNIYKQTPVQGNFGANMLALVNG--EPQLLTIKDFLQVFLDFRVETITRRTQYELRKAEERDHLLQGLLIALDNLDAVIQLIRRAADTSSAKDELVQE-FGLSPVQADAILQMQLRRLTALEAEKIHAEHEELQLKIADLKDILARRERIEAIIEDELTQIKTIHATPRRTEIVHDDGEIVDTDLIANEQAIILLTEQGYIKRMPVSTFEAQQRATRGKAAAKIKDD-DVVEHFLTCCDHDQVLFFSDRGVVYAVNAYQIPSSSRTARGIPIVQMLPIPKDEKITSIVAVSEFREDVFLVMLTRNGYIKKTALSAFSNIRTNGLIAISLGDGDQLRWVRLTREEDSIILGTRKGMAIHFQADNQQLRPLGRATRGVKAMKLKKGDELISMDVLPAQVTAGIGDAAEDEDVLENETEELTEEETTEGPWILAITNGGYGKRVPISQFRLQRRAGMGVRAIKFKSKT-DCLASLHVVNAEDELMIVSNRGIIIRQAVDAISMQSRAATGVRVQRLDDDDAIAAVALVPPAPETDEGE 851
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Match: A0A6J4VPV5_9CYAN (DNA gyrase subunit A n=1 Tax=uncultured Synechococcales cyanobacterium TaxID=1936017 RepID=A0A6J4VPV5_9CYAN) HSP 1 Score: 884 bits (2283), Expect = 1.270e-306 Identity = 452/846 (53.43%), Postives = 612/846 (72.34%), Query Frame = 2
Query: 593 DQVVNVGLEAEIKSSFMQYAMSIILGRALPDVRDGLKPVHRRILYAMYGLNLTPEGTHRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFVMSAPLIQGHGNFGSIDNDPAAAMRYTECKLSHVARDTLLTDINLDTVDMMTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRDPDLPDEKLFRILPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEVKGRPKRNAVVVTELPYQVNKSALLQRMAEMVNDKKLDGISDLRDESDRDGVRVVIELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFVLRAAIQSFVDFRFTTVRRRSAFELGKVRAREHIVQGMLKALGMIDAVIDLVRASTDTHMARDGLMATPYELSHEQADAILALRLGRLTSMEEGKLRAEAADLKETMERLDGVMKEDSKVMDIIVEELTEAKNKHAVPRRTVIKPDEGELHEEDLLANDRSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDRGVAYGIRAFQVPVGSRTAKGVPVPQVLPLAGDEEIASVLAVDDFREDEFLVLLTQKGYIKRTPLAAFKSTSSRGLIIISLGEDDTLRWVKRCRDEDGIIVGSKQGYATRFLANTRDLRPSGRSSRGAKAMNFREGDVPVDIGVLPR--------EDGD------------AEDQGQSLLVLTTRGYGKRVDMNEFKTTRRGGKGVIALKLRKQLEDTLACFRIVGADDEIMLSTTQGTIVRQRAGAIAQQSRTATGVIVQKLDENDGIKDVALVPEIDEHE 3070
++++ L E+ S+++YAMS+I+GRALPD RDGLKPVHRRILYAM+ L L PE RKCARVVGEVLGKYHPHGDTAVYDALVRMAQDF M +PLI GHGNFGSIDNDP AAMRYTEC+L + RD LL DI +TVD NFDG+++EP+VLP+R+P LL+NG++GIAVGMATNIPPHNLGE++ +ALI +P+L D +L + +P PDFPTGG I+G G R+ YTT G +T+R IE +E +GRP R A+++TELPYQ NK+A+++++AEMVN+K+L+GISD+RDESDRDG+RVVIELKRDA P+VV NNLFK+T LQT+F NMLAL + +P L+ ++ F+DFR + RR+ +EL K + R+H++QG+L AL +DAVI L+R + DT AR GL+ + + LS Q+D IL ++L RLT++E K+ E DL+ + L+ ++ +++++II EL E + HA PRRT+I+ EGE+ DL+AN+++V++VT GYIKRMP+ F AQ+R TRGK+G +M D D V HFFTC DHD+ILF SDRGV Y ++A+Q+P GSRT++G+PV Q+LP+ DE+I S++ V +F +DE+LV++T GYIK+T LAAF + + GLI I+L D LRWV+R +D D II+GS+QG A F + LR SGR++RG +AMN R GD + + +LP ED D QG +LV+TT GYGKRV +++F+ R G G++A+K R+ +D LA ++V D+E+M+ T++G I+RQ AI+ QSR ATGV VQ+LDE+D I VALVP E E
Sbjct: 6 ERIIPTDLRNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMHELGLGPERPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLINGHGNFGSIDNDPPAAMRYTECRLQTLTRDALLQDIEQETVDFGDNFDGSQQEPLVLPARVPQLLLNGSSGIAVGMATNIPPHNLGELIDGLVALIHNPELSDIELMQYIPGPDFPTGGHILGTTGIREAYTTGRGSITMRGVATIETLEQRGRPDREAIIITELPYQTNKAAMIEKIAEMVNEKRLEGISDIRDESDRDGMRVVIELKRDAYPRVVLNNLFKQTPLQTNFGANMLALVN--AEPQLLSLKKFLEVFLDFRTEAITRRTRYELRKAQERDHLLQGLLIALENLDAVIHLIRQAADTTSARQGLIDS-FGLSEAQSDGILQMQLRRLTALEAEKIHQEHNDLQSRITDLEDILARRARILEIIETELAELRAVHATPRRTIIEVAEGEIDPTDLIANEKAVILVTEQGYIKRMPVNTFEAQSRATRGKSGTRMKDD-DGVDHFFTCCDHDSILFFSDRGVVYSLKAYQIPPGSRTSRGMPVVQLLPIPRDEKITSIIPVTEFSQDEYLVMMTAGGYIKKTALAAFSNIRANGLIAITLEAGDQLRWVRRAQDGDSIIIGSRQGMAIHFKIDPERLRASGRTARGVRAMNLRNGDQLIGMDILPAATIADLVDEDSDEPTDEVADLVATGPQQGPCVLVITTGGYGKRVPVSQFRLQNRAGMGLVAIKFRRP-QDQLASLQVVNLDNELMMVTSRGIIIRQAVQAISLQSRMATGVRVQRLDEDDSIAAVALVPPSAEEE 846 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.23.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.23.2 >prot_P-littoralis_Contig1.23.2 ID=prot_P-littoralis_Contig1.23.2|Name=mRNA_P-littoralis_Contig1.23.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1019bp MKHARHKGSRQQRRRSSLSIRVGSAAAMLAAAWSLPHRGCHALRVASGPGback to top mRNA from alignment at P-littoralis_Contig1:183416..215284- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.23.2 ID=mRNA_P-littoralis_Contig1.23.2|Name=mRNA_P-littoralis_Contig1.23.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=31869bp|location=Sequence derived from alignment at P-littoralis_Contig1:183416..215284- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:183416..215284- >mRNA_P-littoralis_Contig1.23.2 ID=mRNA_P-littoralis_Contig1.23.2|Name=mRNA_P-littoralis_Contig1.23.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3057bp|location=Sequence derived from alignment at P-littoralis_Contig1:183416..215284- (Pylaiella littoralis U1_48)back to top |