mRNA_P-littoralis_Contig1.132.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: D8LNB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNB9_ECTSI) HSP 1 Score: 252 bits (644), Expect = 2.230e-76 Identity = 143/235 (60.85%), Postives = 157/235 (66.81%), Query Frame = 1
Query: 160 MSAGKREALEVALRRTLGFHLGVDGVDQEEDWELLVCALLDAAEEATLRDGAA-GR---------------RSATIMPLGHKQGLICHRYYIFLRCTGGLFPSRDALKYFPLDVSKEDXXXXXXXXXXXVVEPGCCLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYRR 816
MSA +RE LE ALRRTLGFHLG D +D E+LV ALLD+AEE L D AA GR +S+ P ++ Y LR DALK+FPL S + V EPGCC LCERLMPLTRHHVMPKSTHKRYRKKGY+DAVLNRTI ICRPCHSAVHRAHDA LAE FTT E+LLADE++GRFVAWARKQRTTSVQDSRNNLL YRR
Sbjct: 1 MSARRREDLETALRRTLGFHLGADVAG--DDGEVLVSALLDSAEEGKLMDSAAVGREFDNYLPNVACAASSKSSLSSPSSEQKEEEVELYEDVLR---------DALKHFPLAPSNPEEEGSGSGEDDSVSEPGCCSLCERLMPLTRHHVMPKSTHKRYRKKGYSDAVLNRTIAICRPCHSAVHRAHDALALAERFTTVEELLADETIGRFVAWARKQRTTSVQDSRNNLLRYRR 224
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A7R9U8X6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8X6_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.090e-29 Identity = 59/124 (47.58%), Postives = 75/124 (60.48%), Query Frame = 1
Query: 445 LDVSKEDXXXXXXXXXXXVVEPGCCLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYRR 816
LD+S + + G C LCER MPLT HH++P+ TH++YRKKG LN T ICRPCHSA+HR +D TL HF T E+LL DE++ +FV WA KQR T+ + N YRR
Sbjct: 83 LDISVREEVLERTYDDGEALGQGDCELCEREMPLTAHHLIPRETHRKYRKKGMTQEELNLTTKICRPCHSAIHRTYDNQTLGAHFNTVEKLLGDEAILKFVKWAAKQRPTNTDMAMNGTAKYRR 206
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A7S1U0G4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0G4_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.800e-27 Identity = 55/102 (53.92%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 511 GCCLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYRR 816
G C LCER MPLT HH+MP+ TH++YRKKG + LN ICRPCHS +H+ +D LA +T E+LL D+++ RFV WA KQRTTS + + NN YRR
Sbjct: 75 GECELCEREMPLTAHHLMPRETHRKYRKKGLSQEFLNTCTMICRPCHSHIHKTYDNERLAAELSTVEKLLDDDAILRFVKWAAKQRTTSTEMAANNRAKYRR 176
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A7S4C8S4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8S4_9EUGL) HSP 1 Score: 110 bits (276), Expect = 2.150e-24 Identity = 55/106 (51.89%), Postives = 68/106 (64.15%), Query Frame = 1
Query: 502 VEPGCCLLCERLMPLTRHHVMPKSTHKRYRKKG-YADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYRR 816
+EPGCC +CER MPLT HH++PK TH KKG ++ + R I ICRPCHSA+H HD TLA + T E LL E + RF+ W KQR S +D + LHYRR
Sbjct: 82 LEPGCCAMCERPMPLTFHHLIPKQTHSDLLKKGTFSKDKICRGIWICRPCHSAIHSLHDNKTLAAQYNTLEALLELEQIQRFIKWVSKQRVRSKKDGQ---LHYRR 184
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: W7T1W2_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T1W2_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.090e-23 Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 517 CLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYRR 816
C LCER MPLTRHH+ P++ HK K+G + LN ICRPCHSAVHR +D TLA +F T LLADE +G+FV WA KQR + N LL Y+R
Sbjct: 124 CELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR 223
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A383W3Z1_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W3Z1_TETOB) HSP 1 Score: 109 bits (272), Expect = 1.720e-22 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 1
Query: 505 EPGCCLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRA-HDAATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYRR 816
E G C LC R MPLT+HH++P+ HK ++K+GY+ L + +CRPCHSA+HRA D LA H++T E L E V +F AWAR+QR TS D + YRR
Sbjct: 220 EQGLCALCGRDMPLTKHHLIPRDVHKEFKKRGYSSDQLQAGLMVCRPCHSAIHRAVPDNKQLAAHYSTAEALSQHEEVAKFAAWARRQRVTSKVDVSSKHFKYRR 324
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A1Y1HQL4_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HQL4_KLENI) HSP 1 Score: 101 bits (251), Expect = 4.880e-20 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 508 PGCCLLCERLMPLTRHHVMPKSTHKRY--RKKGYADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYR 813
PGCC LC+R MPLT HH++PKSTHK RK D V +R I ICRPCHS++HR D +A F + ++LL E V +++AWA KQRT + + L ++R
Sbjct: 144 PGCCELCKRFMPLTFHHLVPKSTHKLVVKRKLFSKDEVNSRGINICRPCHSSIHRLIDHKQMAYEFNSLDKLLEHEGVQKWIAWAEKQRTVAKDHAIKGLRYHR 247
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A8K1C4F2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4F2_PYTOL) HSP 1 Score: 97.8 bits (242), Expect = 6.180e-19 Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 1
Query: 517 CLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQRTT 774
C +CER M LT HH++P+ TH+RYRKKGY LN ICRPCHS +H D TLA + T E+++ + R+V++A+KQRT+
Sbjct: 177 CEMCERPMRLTLHHLIPRETHERYRKKGYTQEFLNTCARICRPCHSKIHSTEDNKTLARDYNTVEKIMTHPDIQRWVSYAKKQRTS 262
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A7S3H8T7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8T7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 8.280e-19 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 499 VVEPGCCLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRAHDAATLAEHFTTPEQLLADESVGRFVAWARKQ 765
++E GCCL+CER + LTRHH+ P+ HK KKGY +A L +TI +CR CH+ +HR H LA F T E L+ D + ++ WA Q
Sbjct: 14 LIEDGCCLVCERKVRLTRHHLYPREVHKTLLKKGYDNADLLKTIDVCRLCHNTIHRFHSNDELARSFHTLELLMEDPAFFKYAKWASAQ 102
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Match: A0A7J7PRS8_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PRS8_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 8.550e-19 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 505 EPGCCLLCERLMPLTRHHVMPKSTHKRYRKKGYADAVLNRTITICRPCHSAVHRAHDA-ATLAEHFTTPEQLLADESVGRFVAWARKQRTTSVQDSRNNLLHYRR 816
E G C LC R MPLT+HH++P+ HK ++K G + L + +CRPCHSA+HRA LA H++T E + E V +F AWAR+QR TS D + YRR
Sbjct: 291 EQGLCALCGRDMPLTKHHLIPRDVHKEFKKWGCSFEQLQAGLMVCRPCHSAIHRAVPVNKQLAMHYSTAEAISQHEEVAKFAAWARRQRVTSKGDVTSKHFKYRR 395 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.132.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.132.2 >prot_P-littoralis_Contig1.132.2 ID=prot_P-littoralis_Contig1.132.2|Name=mRNA_P-littoralis_Contig1.132.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=220bp MSAGKREALEVALRRTLGFHLGVDGVDQEEDWELLVCALLDAAEEATLRDback to top mRNA from alignment at P-littoralis_Contig1:801687..806486- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.132.2 ID=mRNA_P-littoralis_Contig1.132.2|Name=mRNA_P-littoralis_Contig1.132.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4800bp|location=Sequence derived from alignment at P-littoralis_Contig1:801687..806486- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:801687..806486- >mRNA_P-littoralis_Contig1.132.2 ID=mRNA_P-littoralis_Contig1.132.2|Name=mRNA_P-littoralis_Contig1.132.2|organism=Pylaiella littoralis U1_48|type=CDS|length=660bp|location=Sequence derived from alignment at P-littoralis_Contig1:801687..806486- (Pylaiella littoralis U1_48)back to top |