mRNA_P-fluviatile_contig1.462.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.462.1
Unique NamemRNA_P-fluviatile_contig1.462.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: A0A6H5JNU1_9PHAE (LRAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU1_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 5.470e-122
Identity = 212/319 (66.46%), Postives = 231/319 (72.41%), Query Frame = 2 
Query:  137 EPELRRWQESRNTSTDLIGA---GSAARPIEIDTADTA---------AQAAAAAYPTTTTPAREREGK-LWGHAVHVHELSPGDQIYVYRGAIQHHGIVIHVPWAPDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSDDPALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGRRQTLSRQATRGLVGAGIVAAGVSAVVSAGGLASAGVAATAWVPRGVHGVRRGVQAIEWATGVAVVAIAAADVVSTLVTRAPVARNVNTPS 1054
            E EL+RWQ+ RN     I A   GS+A+PIEID + TA          +  AA  P    P    EG+ LWGHAVH HEL  GDQIYVYRG IQHHGIV HVP  P   G                       G++VVHFDS CDGVE TSLE FL  GTLRRATY AS WSTGLDYGASYGC +DDPALIVTRATEAAK+GEGASGWSGYNL TNNCETFA+WCSTGRRQ LSRQATRGLVGAG+VAAG SAVVSAGG ASAG AAT  VPRG+ GV+RGV+AIEWATG+AVVA+AAADVVSTLVTRAPV RN+N  S
Sbjct:   42 ELELQRWQQWRNVDLARIAAPPTGSSAQPIEIDCSGTADNNTALAGGKEERAAGGPAGDAPVAAAEGETLWGHAVHEHELCAGDQIYVYRGVIQHHGIVTHVP-VPGRVG-----------------------GVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCAADDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQATRGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGLRGVQRGVKAIEWATGLAVVAVAAADVVSTLVTRAPVERNLNLRS 336
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: D8LNF0_ECTSI (LRAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF0_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 7.850e-121
Identity = 212/320 (66.25%), Postives = 228/320 (71.25%), Query Frame = 2 
Query:  137 EPELRRWQESRNTS---TDLIGAGSAARPIEIDTADTAAQAAA----------AAYPTTTTPAREREGK-LWGHAVHVHELSPGDQIYVYRGAIQHHGIVIHVPWAPDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSDDPALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGRRQTLSRQATRGLVGAGIVAAGVSAVVSAGGLASAGVAATAWVPRGVHGVRRGVQAIEWATGVAVVAIAAADVVSTLVTRAPVARNVNTPS 1054
            E EL+RWQ+ RN     T     GS+ +PIEID A TA    A          A  P    P    EG+ LWGHAVH HELS GDQ+YVYRG IQHHGIV HVP  P   G                       G++VVHFDS CDGVE TSLE FL  GTLRRATY AS WSTGLDYGASYGC +DDPALIVTRATEAAK+GEGASGWSGYNL TNNCETFA+WCSTGRRQ LSRQA RGLVGAG+VAAG SAVVSAGG ASAG AAT  VPRGV GV+RGV+AIEWATGVAVVA+AAADVVSTLVTRAPV RN+N  S
Sbjct:   25 ELELQRWQQWRNVDLARTVAPPTGSSTQPIEIDCAGTADNNTALAGGGEEERTAGGPEGDAPVAATEGETLWGHAVHEHELSAGDQVYVYRGVIQHHGIVTHVP-VPGRAG-----------------------GVRVVHFDSNCDGVESTSLETFLNGGTLRRATYGASAWSTGLDYGASYGCATDDPALIVTRATEAAKFGEGASGWSGYNLCTNNCETFAYWCSTGRRQVLSRQAARGLVGAGVVAAGASAVVSAGGFASAGAAATVLVPRGVRGVQRGVKAIEWATGVAVVAVAAADVVSTLVTRAPVERNLNLRS 320
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: A0A6P5TMJ6_PRUAV (HRAS-like suppressor 2 n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5TMJ6_PRUAV)

HSP 1 Score: 77.0 bits (188), Expect = 1.350e-12
Identity = 61/177 (34.46%), Postives = 82/177 (46.33%), Query Frame = 2 
Query:  332 ELSPGDQIYVYRGAIQHHGIVIHVPWA----PDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSDDPALIVTR-ATEAAKYGE-GASGWSGYNLLTNNCETFAFWCSTGRRQTLSRQATRGLVGAGIVAA 844
            EL PGD IY YR    HHGI +   W     P    ++R + +  P +TSC          +  H  +   GV  T ++ FLK   L R  Y  S     L    +    S  P+    R ATE  K  E   +G+  Y+LL+NNCETFA +C TG+R  LSRQ  + +   G  +A
Sbjct:   12 ELQPGDHIYSYRIGFSHHGIYVGEGWVIHFTPTCKSVIRFSATYEPVTTSCR---------RCGHDPNKKGGVLKTCIDCFLKGDGLHRFEYNVSLSYVILKQDGTCSTWSCYPSDETVRLATEIFKKDEVDGTGFGEYDLLSNNCETFASYCKTGKR--LSRQVIQAIASVGFPSA 177
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: A0A2P5CH67_PARAD (Endopeptidase, NLPC/P60 domain containing protein n=1 Tax=Parasponia andersonii TaxID=3476 RepID=A0A2P5CH67_PARAD)

HSP 1 Score: 62.8 bits (151), Expect = 2.510e-7
Identity = 57/163 (34.97%), Postives = 75/163 (46.01%), Query Frame = 2 
Query:  332 ELSPGDQIYVYRGA--IQHHGIVIHVPWAPDGDGIV-RSTPSPSPSSTSCLSPTALFTGIQVVHFDSACD-GVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSD----DPALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGRRQTL 796
            +L  GD +Y +R A    HHGI +       GD IV + T +    S++  + T   T   V  +    D GV  + LE FLK   L R  Y  S  S+      S  CT+      P  +V RATE         G+  YNLL NNCETFA +C T +R +L
Sbjct:   16 QLQAGDHVYSFRNAHIYSHHGIYV-------GDNIVIQFTRTQKTESSNSSNRTT--TRCNVCQYSPKEDRGVVKSCLECFLKGHRLFRFEYGVS--SSHFVLKRSGTCTTGPCRYSPEEVVRRATEMLN---SVEGFGEYNLLRNNCETFAVYCKTNKRISL 164
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: UPI000CED571F (uncharacterized protein LOC112091597 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED571F)

HSP 1 Score: 60.8 bits (146), Expect = 7.110e-7
Identity = 57/169 (33.73%), Postives = 73/169 (43.20%), Query Frame = 2 
Query:  305 LWGHAVHVHELSPGDQIYVYRG--AIQHHGI------VIHVPWAPDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASPWS-TGLDYGASYGCTSDDPALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGR 784
            L+ + V    L PGD IY YR   +  HHGI      VIH           R+T  P  SS  C         I   H  S   GV  T ++ FL    L R  Y  S       + G     +SD P ++V RA E         G+S Y+LL NNCE+FA +C+TG+
Sbjct:    3 LFSNKVDRRILKPGDHIYTYRTLHSYSHHGIYVEENRVIH---------FTRTTDLPGESSIRC--------NICDYH-GSTQRGVVKTCIDCFLGGHELYRFEYNVSKAHFCTKNLGTCSVGSSDAPNVVVQRAIEML----AGRGFSDYDLLNNNCESFAVYCTTGK 149
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: UPI000CED2585 (lecithin retinol acyltransferase isoform X1 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED2585)

HSP 1 Score: 60.5 bits (145), Expect = 8.470e-7
Identity = 56/175 (32.00%), Postives = 72/175 (41.14%), Query Frame = 2 
Query:  302 KLWGHAVHVHELSPGDQIYVYR-GAI-QHHGIVIHVPWAPDGDGIVRS-------TPSPSPSSTSCLSPTALFTGIQVVHFD---SACDGVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSDDPA-LIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGRR 787
            +L  H +    L PGD IY YR G I  HHGI +       GD +V          PS  P   +C              +D      D V  T L+ FLK   L R  Y  +     L    S      DPA +++ RA  A        G+  Y+L+ NNCE+FAF+C TG R
Sbjct:    3 RLLSHEIDRSMLIPGDHIYTYRWGYIYSHHGIYV------GGDRVVHFKMANLLLVPSNRPRCKNC-------------GYDRRAQLADAVVKTCLDCFLKGDRLFRFEYEVNGLYYMLKNPGSCTTNKCDPADVVINRARNAC-----IKGFGKYDLVENNCESFAFYCKTGTR 153
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: UPI001AD8FC02 (protein LEAD-SENSITIVE 1 isoform X1 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8FC02)

HSP 1 Score: 60.8 bits (146), Expect = 1.350e-6
Identity = 54/168 (32.14%), Postives = 77/168 (45.83%), Query Frame = 2 
Query:  335 LSPGDQIYVYR--GAIQHHGIVIHVPWAPDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSDD---PALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGRRQTLSRQATRGLV 823
            L  GD IY YR  G   HHGI I       G+  V      +  +TS         G+   H      GV  + ++ FL   +LRR  Y+AS      + G +  CT+ D   P + ++RA +          +  Y+LL NNCETFA +C TG+R+  S QA  G++
Sbjct:   26 LERGDHIYAYRKGGLYSHHGIFI-------GEDRVIHFVRTNEGNTSRRVEPCQKCGVDKNHLR----GVVKSCVDCFLNGHSLRRYRYSASHRRFATNLGGT--CTTGDADPPDVTISRAEDLFN----TKDFGDYDLLKNNCETFAVFCKTGKRR--SDQADTGIL 174
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: A0A2P6SPM6_ROSCH (Putative endopeptidase, NLPC/P60 domain, LRAT-like domain-containing protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SPM6_ROSCH)

HSP 1 Score: 57.4 bits (137), Expect = 9.330e-6
Identity = 49/155 (31.61%), Postives = 69/155 (44.52%), Query Frame = 2 
Query:  335 LSPGDQIYVYR--GAIQHHGIVIHVPWAPDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSDD---PALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGR 784
            L  GD IY YR  G   HHGI I       G+  V      +  +TS         G+   H      GV  + ++ FL   +LRR  Y+AS      + G +  CT+ D   P + ++RA +          +  Y+LL NNCETFA +C TG+
Sbjct:   58 LERGDHIYAYRKGGLYSHHGIFI-------GEDRVIHFVRTNEGNTSRRVEPCQKCGVDKNHLR----GVVKSCVDCFLNGHSLRRYRYSASHRRFATNLGGT--CTTGDADPPDVTISRAEDLFN----TKDFGDYDLLKNNCETFAVFCKTGK 195
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: A0A2R6W0H9_MARPO (LRAT domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W0H9_MARPO)

HSP 1 Score: 57.0 bits (136), Expect = 1.840e-5
Identity = 52/182 (28.57%), Postives = 73/182 (40.11%), Query Frame = 2 
Query:  332 ELSPGDQIYVYR--GAIQHHGIVIHVPWAPDGDGIV----------------RSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASP---WSTGLDYGASYGCTSDDPALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTGRRQTLSRQATR 814
            ++  GD +Y YR  G   HHGIV       D DG +                R++    P S  C             +F     GV  T +E F ++G L +  Y       W        +    S DPA I  RA  + +     + +  Y+L+ NNCE FA +CSTGRR   S+Q +R
Sbjct:   21 DVKEGDHVYSYRSGGKYTHHGIV-------DADGRLIHIVRNRHLYKDKTHRRTSGLIRPGSKKCQDENC------PTYFGDRNCGVIKTCIECFKEDGELHKYYYGNKSYCSWKLIDGVTTTESEKSSDPAEISARARHSLEN----NNFEHYDLVDNNCEDFALYCSTGRRGEKSKQISR 185
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BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Match: A0A4U5MPT1_POPAL (Retinoic acid receptor responder protein 3-like n=1 Tax=Populus alba TaxID=43335 RepID=A0A4U5MPT1_POPAL)

HSP 1 Score: 56.2 bits (134), Expect = 2.140e-5
Identity = 51/157 (32.48%), Postives = 65/157 (41.40%), Query Frame = 2 
Query:  326 VHELSPGDQIYVYRGAIQHHGIVIHVPWAPDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDGVEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASY-GCTS----DDPALIVTRATEAAKYGEGASGWSGYNLLTNNCETFAFWCSTG 781
            + ++  G  IYV+R    HHGI I       GDG V     P    T                  +   GV  T LE FL  G+L R  Y        + + A+   CT+    +  + IV  A E  K G G      YNLL+NNCE FA +CSTG
Sbjct:   30 IGQIPEGLHIYVHRPGYTHHGIYI-------GDGKVIHFVGPKAGPTRACKKCGFSR--------NTGHGVVETCLECFLHGGSLCRYNYNVPRIRLRITFDATCPNCTTTERWESGSQIVETAKEKLKEGFGK-----YNLLSNNCEHFATFCSTG 166
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JNU1_9PHAE5.470e-12266.46LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LNF0_ECTSI7.850e-12166.25LRAT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6P5TMJ6_PRUAV1.350e-1234.46HRAS-like suppressor 2 n=1 Tax=Prunus avium TaxID=... [more]
A0A2P5CH67_PARAD2.510e-734.97Endopeptidase, NLPC/P60 domain containing protein ... [more]
UPI000CED571F7.110e-733.73uncharacterized protein LOC112091597 n=1 Tax=Morus... [more]
UPI000CED25858.470e-732.00lecithin retinol acyltransferase isoform X1 n=1 Ta... [more]
UPI001AD8FC021.350e-632.14protein LEAD-SENSITIVE 1 isoform X1 n=1 Tax=Rosa c... [more]
A0A2P6SPM6_ROSCH9.330e-631.61Putative endopeptidase, NLPC/P60 domain, LRAT-like... [more]
A0A2R6W0H9_MARPO1.840e-528.57LRAT domain-containing protein n=1 Tax=Marchantia ... [more]
A0A4U5MPT1_POPAL2.140e-532.48Retinoic acid receptor responder protein 3-like n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5149343..5153460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score78.2
Seed ortholog evalue8.3e-12
Seed eggNOG ortholog4096.XP_009796479.1
EggNOG free text desc.Lecithin retinol acyltransferase
EggNOG OGs28KZX@1,2QTGR@2759,37P4P@33090,3G75P@35493,44P2M@71274
COG Functional cat.S
Best tax levelasterids
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLRAT-like domain
Ec32 orthologEc-04_004100.1
Exons5
Model size1754
Cds size1017
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815339.528103-UTR-P-fluviatile_contig1:5149342..51494251622815339.528103-UTR-P-fluviatile_contig1:5149342..5149425Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5149343..5149425 +
1693561552.4972599-UTR-P-fluviatile_contig1:5149342..51494251693561552.4972599-UTR-P-fluviatile_contig1:5149342..5149425Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5149343..5149425 +
1622815339.5372157-UTR-P-fluviatile_contig1:5150677..51506791622815339.5372157-UTR-P-fluviatile_contig1:5150677..5150679Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5150678..5150679 +
1693561552.5063517-UTR-P-fluviatile_contig1:5150677..51506791693561552.5063517-UTR-P-fluviatile_contig1:5150677..5150679Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5150678..5150679 +
1622815339.5831356-UTR-P-fluviatile_contig1:5152808..51534601622815339.5831356-UTR-P-fluviatile_contig1:5152808..5153460Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5152809..5153460 +
1693561552.5963519-UTR-P-fluviatile_contig1:5152808..51534601693561552.5963519-UTR-P-fluviatile_contig1:5152808..5153460Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5152809..5153460 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815339.54555-CDS-P-fluviatile_contig1:5150679..51509461622815339.54555-CDS-P-fluviatile_contig1:5150679..5150946Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5150680..5150946 +
1693561552.5139027-CDS-P-fluviatile_contig1:5150679..51509461693561552.5139027-CDS-P-fluviatile_contig1:5150679..5150946Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5150680..5150946 +
1622815339.554146-CDS-P-fluviatile_contig1:5151357..51515731622815339.554146-CDS-P-fluviatile_contig1:5151357..5151573Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5151358..5151573 +
1693561552.5700378-CDS-P-fluviatile_contig1:5151357..51515731693561552.5700378-CDS-P-fluviatile_contig1:5151357..5151573Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5151358..5151573 +
1622815339.564545-CDS-P-fluviatile_contig1:5152007..51522221622815339.564545-CDS-P-fluviatile_contig1:5152007..5152222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5152008..5152222 +
1693561552.5796573-CDS-P-fluviatile_contig1:5152007..51522221693561552.5796573-CDS-P-fluviatile_contig1:5152007..5152222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5152008..5152222 +
1622815339.572534-CDS-P-fluviatile_contig1:5152489..51528081622815339.572534-CDS-P-fluviatile_contig1:5152489..5152808Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5152490..5152808 +
1693561552.5871286-CDS-P-fluviatile_contig1:5152489..51528081693561552.5871286-CDS-P-fluviatile_contig1:5152489..5152808Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5152490..5152808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.462.1prot_P-fluviatile_contig1.462.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5150680..5152808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.462.1

>prot_P-fluviatile_contig1.462.1 ID=prot_P-fluviatile_contig1.462.1|Name=mRNA_P-fluviatile_contig1.462.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=339bp
MEDRSVAAPGNDDIATVEPELRRWQESRNTSTDLIGAGSAARPIEIDTAD
TAAQAAAAAYPTTTTPAREREGKLWGHAVHVHELSPGDQIYVYRGAIQHH
GIVIHVPWAPDGDGIVRSTPSPSPSSTSCLSPTALFTGIQVVHFDSACDG
VEFTSLEAFLKEGTLRRATYAASPWSTGLDYGASYGCTSDDPALIVTRAT
EAAKYGEGASGWSGYNLLTNNCETFAFWCSTGRRQTLSRQATRGLVGAGI
VAAGVSAVVSAGGLASAGVAATAWVPRGVHGVRRGVQAIEWATGVAVVAI
AAADVVSTLVTRAPVARNVNTPSAHLGVDGGGGVSVSH*
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mRNA from alignment at P-fluviatile_contig1:5149343..5153460+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.462.1 ID=mRNA_P-fluviatile_contig1.462.1|Name=mRNA_P-fluviatile_contig1.462.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4118bp|location=Sequence derived from alignment at P-fluviatile_contig1:5149343..5153460+ (Porterinema fluviatile SAG_2381)
CACAACGTGAGGTTCCGTCGCACACGGGTGTAGGCACCGGGATTTAAAAA
GGGCTCTTTCAAAGAAGCGAAGAAGCGGTGGAGGTGAGCATATTGGAGAT
GCTCCGTAAGGGGGGAGAGGAAATGCACATCTGGACTACATATCTCAGCT
TCCTCTAGGCCGACCAGCGGCGGTCCAGATGAAGTGCGATAAAATGGCGC
CGCACCACAGCCGGACCGTATCGCAGGGACTTGCCAGTCAGCACTGTTCC
CTTAATGTTCTGCACGAAAATGATTAGTCCAGGGTCAAGCCCCGGAAGCT
GAGGTTTATAGTACACGGAGTATTTGGTCCAGTTGGTATCCTCGTAACCT
CCTAGTACCCAAGCCACGGGTTCGAATCTCGGCTAGAGTGTTTTTTTCTC
ACTTTCGTACCTGGGAGTAGAAAGCGGTGAAAAGCTAGAAAGCTTCGTGA
GTACAAAAAATTCGACTCAGCGGTCGACGAGGGAAAGAGACGGTTGAACC
CTTCTCGCGATAAAAATGAAGGCAAGCACCGCAGGAAGGTGGGGCACAAG
AACAATAACAAGCAGAAAAAAGTCCAGGTGTTTACCCCCTCCTGTGTGAC
CGCGGTTGGTTCTAGGTGGACAGAAAAATACACTGAACAAATGTAGTCCT
CTAAATACGCTGCAAAGTGTAGTACACGTCTCGCCTTGATCGGAGGGACT
GTCGCCAATATAGTGACGAAAACACATTTGCGGAAGTTGAAGGACACACG
TGACGTTCGCCCGGTCACTATAATCGGGGAACGAGACGCCCTCTCGGTTG
TAAGGCGCGGGTAGCCCTTAGCCTCATCAATGACATCAGCCGGCTCCAGT
CACGCGTTTCCATCTTTTCTTGCTGGCAGGAAAAAATCGCCTCGTTGTAC
TGCCTATCACACGTCTTGCTACCAGAAAGGCAGATATTTCGAAATGTGTG
TCTCGCTCCCCTCGCCGCAGTCTGTGCAACTTCGCATCTCAAGTCGTTGC
AAAGGTGCGCTGTGCCACTAAGATGCCCTGCGCCTACATGGCCTGCGTCC
ACCCCACGACCATCCCCCCATGCCGTTCCCTTCCCCGTGGGGGGCTGATC
CTCATCTCCGTGCATTCCCTAGACCCGGTAGCCGTTTGCCACTCCCTCCA
ACCTGTCAGTTCTTCACAACAGTGGGAGACGCCGTCGTGAAAGTAGGGAT
GGCTGTCACGTCTTGTGATCAGATCGTTCTGCCCGCCTTTGGGATATCTA
TAAAATACCAGTAAACAGCATCAAAAATCCCTTGCCTCCCGTTTTTCCGA
TCTCGCCCCTCCCCCGCCCCCTCATACGGAGGCAGGGATGGAGGATAGAT
CTGTGGCCGCTCCTGGCAACGATGACATTGCTACTGTCGAACCCGAGCTG
CGACGCTGGCAAGAGAGTCGAAACACCAGCACCGATCTCATTGGTGCAGG
GAGCGCGGCTCGACCGATCGAGATCGACACCGCCGATACGGCTGCCCAAG
CGGCTGCTGCTGCGTATCCCACCACAACGACGCCAGCGCGTGAAAGGGAA
GGGAAGCTGTGGGGGCACGCTGTTCACGTGCACGAGCTTTCTCCTGGAGA
TCAGGCACGACTGGAGTGTTTCTGTTGTCGACAGCAGAAAACCTGGGCAA
CGGTCTCGTCTTCCCCTCCTAGTTGTTTCTGCTTCCCCCCTGTTGCTGTA
TGATGTGCAAGTTTATTTTCGTCTATCTATTCCTTGTTCCTTCGCGCGGC
AAACACGCGCTGGTACTGCAGGTTCACGCTCGAAAGCGGTAGAGCAGCAA
CGGTTCATGTTTCGATGCGTCCGGCTTCGGGCTTCTTTCCCTAGTCGCCT
TTCTGCCAAAAGGTCGATGATGTGGCTGACAGGTATCAAGATATATATTT
GCAGAGGGTGGGGCCTCTATATTCTCTGTTCGTCCTCGTCGGGCTTTCCC
CCATGAAAAGTATGCTGGCAGTGAATCCCAACCTCGTCCGTCGTCACACA
CTTCACGCGCCACAGATCTACGTGTACCGTGGAGCCATTCAGCACCATGG
CATCGTGATTCACGTGCCGTGGGCTCCAGACGGCGATGGGATCGTCAGGT
CCACGCCATCGCCATCGCCATCGTCGACTTCATGCCTCTCGCCAACGGCG
TTGTTCACAGGCATACAGGTCGTTCACTTTGACTCCGCCTGCGATGGCGT
TGAATTCACCAGCCTTGAAGCCTTCCTCAAGGTGAACACTGAGAGTCGAC
ACAAAATGGTCCAGAGGTTCGCCTTCACTGCTTCAAGTTCTCTGCAGCAG
TCCGCGGTCGCCACGGGCGGCTGCAACTCGGCCTGGCTTGCGCCATGCAG
AGAGTCGTGTGATTTCGCGGAAGGATCCGCGGCGGTTCACTTCGCGCAGA
CTTTGTTGCGAGACAGCGCTGTGCGTATTTGAGCTAATGACTATGGCGTC
CGCGCCGTTGAGGTCTGCAGTTGTGTTCACGTTTGCAGGCTGTGTGCTCG
TCTGGCTAGTGTTTTGTCCTCACTTTCTCGCGTGCGTGAGCGTCGCTCAG
GCTCCAAACAATACCAAGAACACCCCTGGTCCGTGTCTGTGGCTCTTCGG
GTGCGCTGGAAAAATCTCCGAAACACCAGGCTTAAATAAACCAACCGAAT
CCAAATGTAATGCAGGAGGGAACTCTTCGGAGAGCAACGTACGCGGCGTC
GCCATGGTCCACGGGCCTTGACTACGGCGCGAGCTACGGTTGCACTTCAG
ACGACCCGGCTCTGATCGTAACCCGAGCCACCGAGGCTGCCAAGTATGGA
GAAGGTGCAAGCGGGTGGAGTGGCTACAATCTTCTCACCAACAACTGCGA
GACGTTCGCGTTCTGGTGTTCTACCGGCAGGCGAGGGTGCATTTTTGACG
GATGCCGGAAGCTTGAAGATTCCCTAGTTCCCGCTGGTTTGTTGCTAATC
CTTGGCGAACGACGCCGGTACAAAAGAGTCTGGACAAAAGTGGGCAGACT
CTTATCAACGAAAATACCTCAGAGTTTGCTAGAACATTGCTTCCAGAAGT
CACAATAACGAACAGGAGTTCACCACAGACCCCGCCCCACCCCCACCCCA
AAACTTCTCTGCGCTCGCCCTCTTCGCCTTTGACATGAACCAAACAGACG
GCAAACTCTCTCGCGCCAGGCAACTCGAGGGCTTGTGGGGGCAGGCATCG
TGGCTGCTGGTGTTTCCGCCGTGGTGTCGGCTGGAGGCCTAGCTTCCGCG
GGTGTGGCGGCCACCGCCTGGGTGCCCCGCGGAGTGCACGGCGTTCGGAG
AGGTGTTCAGGCCATAGAGTGGGCGACAGGCGTGGCGGTCGTGGCCATTG
CAGCTGCAGACGTTGTTTCCACTCTCGTGACAAGGGCGCCGGTGGCAAGA
AATGTTAATACCCCCAGTGCGCACCTCGGCGTCGATGGCGGCGGCGGTGT
TTCGGTTTCGCATTGATTCGACGGGTTCTTTGGTCGCATGCGGCTGCCAG
AACACTGGTCGAAATTTGCCCCGTTGTGATACACCGCGCTTTTTTGTTTT
GCACGCCCATTTGCATTGGCGGGATGATTTCGGCTCGACCCAGACAACGC
GATTCCTTTGAAACGGCGGAAGTTTATAGTCTTTTGACTGTCAGGAACAG
CTGACAAGCAGAAGCCCCCGTTCGGCTTCATGATTTCGTAGCTCTGCCGC
GTACTGGCCGCCTCGTCGTGCCGTAGTCAAAAGCCGTGGGGTACCTGCTT
CGCGAAGTCGGCGGATTGAGTGTATCCTTCACTTTCGAACTCATGTGCAT
TCAAAGTATTGACAATGTGTTGTGCTACGTGGACTTTTTCACATCCCGCT
TTGATTTTGGAGTATTGGGTTCGAAGTTTAGGCGTAGGGAAGGTTCACAT
TCCCAACTTTGATTTTGAAATTTATTCTCTGGAGTATGGGGGTAGGGAAG
GTCCAGGTGCCTGTTTGCTCACACTTTTGGCCGCGAAGAATCACCAGCGA
TCGTTTGAATGTAGAAGGCCTCGGGTTGCTGTGGCCTCGTGTAAATCGTC
GCCTGTTTTCAGTCTCCAATCGCAGCCACCGCTGCCCGGTAGGAGCTAGT
ATAATCATGTGAGTCAAT
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:5149343..5153460+

>mRNA_P-fluviatile_contig1.462.1 ID=mRNA_P-fluviatile_contig1.462.1|Name=mRNA_P-fluviatile_contig1.462.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2034bp|location=Sequence derived from alignment at P-fluviatile_contig1:5149343..5153460+ (Porterinema fluviatile SAG_2381)
ATGGAGGATAGATCTGTGGCCGCTCCTGGCAACGATGACATTGCTACTGT
CGAACCCGAGCTGCGACGCTGGCAAGAGAGTCGAAACACCAGCACCGATC
TCATTGGTGCAGGGAGCGCGGCTCGACCGATCGAGATCGACACCGCCGAT
ACGGCTGCCCAAGCGGCTGCTGCTGCGTATCCCACCACAACGACGCCAGC
GCGTGAAAGGGAAGGGAAGCTGTGGGGGCACGCTGTTCACGTGCACGAGC
TTTCTCCTGGAGATCAGATGGAGGATAGATCTGTGGCCGCTCCTGGCAAC
GATGACATTGCTACTGTCGAACCCGAGCTGCGACGCTGGCAAGAGAGTCG
AAACACCAGCACCGATCTCATTGGTGCAGGGAGCGCGGCTCGACCGATCG
AGATCGACACCGCCGATACGGCTGCCCAAGCGGCTGCTGCTGCGTATCCC
ACCACAACGACGCCAGCGCGTGAAAGGGAAGGGAAGCTGTGGGGGCACGC
TGTTCACGTGCACGAGCTTTCTCCTGGAGATCAGATCTACGTGTACCGTG
GAGCCATTCAGCACCATGGCATCGTGATTCACGTGCCGTGGGCTCCAGAC
GGCGATGGGATCGTCAGGTCCACGCCATCGCCATCGCCATCGTCGACTTC
ATGCCTCTCGCCAACGGCGTTGTTCACAGGCATACAGGTCGTTCACTTTG
ACTCCGCCTGCGATGGCGTTGAATTCACCAGCCTTGAAGCCTTCCTCAAG
ATCTACGTGTACCGTGGAGCCATTCAGCACCATGGCATCGTGATTCACGT
GCCGTGGGCTCCAGACGGCGATGGGATCGTCAGGTCCACGCCATCGCCAT
CGCCATCGTCGACTTCATGCCTCTCGCCAACGGCGTTGTTCACAGGCATA
CAGGTCGTTCACTTTGACTCCGCCTGCGATGGCGTTGAATTCACCAGCCT
TGAAGCCTTCCTCAAGGAGGGAACTCTTCGGAGAGCAACGTACGCGGCGT
CGCCATGGTCCACGGGCCTTGACTACGGCGCGAGCTACGGTTGCACTTCA
GACGACCCGGCTCTGATCGTAACCCGAGCCACCGAGGCTGCCAAGTATGG
AGAAGGTGCAAGCGGGTGGAGTGGCTACAATCTTCTCACCAACAACTGCG
AGACGTTCGCGTTCTGGTGTTCTACCGGCAGGAGGGAACTCTTCGGAGAG
CAACGTACGCGGCGTCGCCATGGTCCACGGGCCTTGACTACGGCGCGAGC
TACGGTTGCACTTCAGACGACCCGGCTCTGATCGTAACCCGAGCCACCGA
GGCTGCCAAGTATGGAGAAGGTGCAAGCGGGTGGAGTGGCTACAATCTTC
TCACCAACAACTGCGAGACGTTCGCGTTCTGGTGTTCTACCGGCAGACGG
CAAACTCTCTCGCGCCAGGCAACTCGAGGGCTTGTGGGGGCAGGCATCGT
GGCTGCTGGTGTTTCCGCCGTGGTGTCGGCTGGAGGCCTAGCTTCCGCGG
GTGTGGCGGCCACCGCCTGGGTGCCCCGCGGAGTGCACGGCGTTCGGAGA
GGTGTTCAGGCCATAGAGTGGGCGACAGGCGTGGCGGTCGTGGCCATTGC
AGCTGCAGACGTTGTTTCCACTCTCGTGACAAGGGCGCCGGTGGCAAGAA
ATGTTAATACCCCCAGTGCGCACCTCGGCGTCGATGGCGGCGGCGGTGTT
TCGGTTTCGCATTGAACGGCAAACTCTCTCGCGCCAGGCAACTCGAGGGC
TTGTGGGGGCAGGCATCGTGGCTGCTGGTGTTTCCGCCGTGGTGTCGGCT
GGAGGCCTAGCTTCCGCGGGTGTGGCGGCCACCGCCTGGGTGCCCCGCGG
AGTGCACGGCGTTCGGAGAGGTGTTCAGGCCATAGAGTGGGCGACAGGCG
TGGCGGTCGTGGCCATTGCAGCTGCAGACGTTGTTTCCACTCTCGTGACA
AGGGCGCCGGTGGCAAGAAATGTTAATACCCCCAGTGCGCACCTCGGCGT
CGATGGCGGCGGCGGTGTTTCGGTTTCGCATTGA
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