mRNA_P-fluviatile_contig1.461.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.461.1
Unique NamemRNA_P-fluviatile_contig1.461.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: D8LNE9_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE9_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 1.000e-150
Identity = 235/328 (71.65%), Postives = 274/328 (83.54%), Query Frame = 2
Query:   92 LLLSLALQLHSGYSFLLPATAATHCHHISRPAPSSKTTALASAPTHVQAEEGGG---DEEQELEQ---DSALTSPAGLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGIDGDMSRVEALDWDQTVAVLGRFAGESEIVLVIKRLVKRESIKVQFALPGGSREYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
            LLL LALQL +G SFLLP+ A T C   +  + S+    + ++     AEE      ++E ++E    D    SP+GLTL+GVYKRL +ETQ  ADGVVGLESKD DY IEVVKV+++R PSLG+QLEEVARGGDGRGLVL+AG+EP GNAEA+GKI VGDTLCSAGI+GDMSRVEALDWDQTV+VLG FA ESEIVLVIKRLVKRESI VQF LP GSR+++IKAGSNLRGEM+R ++PVYDP+T RFDQPYATGNCAGEGTCGTCFVE+Q+GADLLT PD+EEL+LLSR NLPVRWRLSCKVIVGKENKAGTV++KA+PQAEWRS+
Sbjct:    9 LLLLLALQLRNGASFLLPSPAITRCSGFA--SRSASCGVMRASEADGDAEETASLNVEDEAKVEDEGDDGLARSPSGLTLDGVYKRLTLETQSRADGVVGLESKDTDYAIEVVKVQMQRKPSLGMQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGDMSRVEALDWDQTVSVLGSFAEESEIVLVIKRLVKRESINVQFELPSGSRDHEIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQ 334          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A836CRA8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA8_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.370e-71
Identity = 133/271 (49.08%), Postives = 181/271 (66.79%), Query Frame = 2
Query:  302 GLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGIDG--DMSRVEALDWDQTVAVLGRFAGESEIVLVIKRLVKRESIKVQFALPG-----------GSREYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSEKKK*TQ 1075
            G++LEG+YKRLK+E   L +G++GLES+DP +GIE+V                       RGLVLI  V   GNA  +G I  GDTL   G +   DM+RVE  D+D TVA LG++A  +EI LV+KRLV+R++++V F  P            G +   + AGSNLR EM+RR+IPVYD +T RFDQPYATGNC GEG CGTCFVE+QEGA+LL+PPD  E +++   NLP RWRLSC+ +VG +N+AG V++++IPQ+ + +E+K+ T+
Sbjct:   41 GVSLEGIYKRLKIEILDLDEGIIGLESRDPAFGIEIV-----------------------RGLVLIGDV--GGNAAESGLINTGDTLTYVGNEAARDMTRVEGQDYDTTVAALGKYADLAEITLVLKRLVQRKTLEVTFETPTAYAEDGTAVEWGGQGVQMLAGSNLRSEMIRRDIPVYDAKTRRFDQPYATGNCGGEGICGTCFVEVQEGAELLSPPDGLENMVMR--NLPRRWRLSCRTVVGGKNEAGQVRLRSIPQSAYVAERKRDTR 284          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7S4DIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIM7_HETAK)

HSP 1 Score: 234 bits (596), Expect = 1.810e-67
Identity = 124/259 (47.88%), Postives = 167/259 (64.48%), Query Frame = 2
Query:  275 QDSALTSPAGLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGID-GDMSRVEALDWDQTVAVLGRFAGESEIVLVIKRLVKRESIKVQFALPGGSR-EYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAE 1045
            +D    +  GLTLE +    KM    L +G+ GL+++D +YGIE+ K  V R+  LGL L E+  G DGRGLVL+  V   GNA  TG+  VGD L   G + GDM+RVE LD+D T+A LG++A    + LV KRLV+R+ ++V    P GS  + ++ AGS LRGEM+R+ + VYDP   RFDQPY TGNC GEG CGTC V + EG +LL+ PDR E ++L +   P R+RLSC+ IVG  N+ G V +K++P  E
Sbjct:   57 EDGVTRNADGLTLEEIAGLFKMSVFDLDEGLYGLDTRDVNYGIEIAKARVSREGGLGLGLSEMMAGRDGRGLVLVEDVAEGGNAATTGQFRVGDALSWVGEEPGDMTRVEGLDFDGTLAALGKYADREAVTLVAKRLVRRQPLEVTLIQPDGSEAKLEMLAGSVLRGEMLRQGLQVYDPSQKRFDQPYVTGNCGGEGLCGTCLVAVLEGKELLSLPDRVEAMVLEKR--PARYRLSCRTIVGVTNQPGKVVLKSMPTLE 313          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A4D9CWU2_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWU2_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.580e-57
Identity = 122/274 (44.53%), Postives = 159/274 (58.03%), Query Frame = 2
Query:  296 PAGLTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKR-DPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEAT----GKIFVGDTLCSAGIDG-DMSRVEALDWDQTVAVLGRF--AGESEIVLVIKRLVKRESIKVQFAL-PGGSREYD----------IKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSEK 1060
            P  LTLE +  ++K E   L  G  GLESKD  Y +E+ KV++   +  +GL LEE+ RG DGRG VL++ + P+GNA       GKI VGD +C  G +   M R E LD++QT+  L RF   G   I LV+KRLV R S+ V  +  PG   E            + AGS LR E++R  +PVY   TLRFDQPY TGNC GEG CGTC V++ EG +LL   D  E ++  +      WRLSC+VIVG  N  GTV+ K +PQA +  +K
Sbjct:   12 PPPLTLEEISNKIKFEITDLDAGAYGLESKDVAYAVEIAKVDIPLGEGGIGLGLEELRRGQDGRGCVLVSSLPPEGNAAQAAGDDGKIRVGDMICYLGQEPRGMVRTEGLDFEQTMGALRRFLETGAPAITLVLKRLVFRASLDVSLSYTPGPDEESQGRKAWTQTLPMLAGSQLRKELLRAGLPVYSQDTLRFDQPYVTGNCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGA-ANWRLSCRVIVGATNTPGTVRFKLMPQAPFTKKK 284          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7S2V297_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V297_9STRA)

HSP 1 Score: 191 bits (485), Expect = 5.650e-53
Identity = 101/205 (49.27%), Postives = 139/205 (67.80%), Query Frame = 2
Query:  482 RGLVLIAGVEPDGNAEATGKIFVGDTLCSAGIDGDMSR----VEALDWDQTVAVLGRFAGES---EIVLVIKRLVKRESIKVQFALP-GGSREYDIKAGSNLRGEMMRREIP--VYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSEKKK 1066
            RGLVL+  + P GNA  + KI VGDTLC A      +R    +EA+D D T+  LG  +  S   ++VL+ KRLVKRE + V+ ALP GG +   + +GSNLRGEM+R+ +P  +YDP+T R+DQP+ TGNC GEG CGTC +E+ +G ++L+  D  E +LL   N P+RWRLSC+  VG +NK+G+VKV+A+PQ E R  +KK
Sbjct:    1 RGLVLVKDLAPGGNAALSAKIRVGDTLCRAADPTVGARSVVSLEAVDLDGTLQNLGALSFASRQKQLVLIFKRLVKREMVNVKIALPDGGEKTLQMLSGSNLRGEMIRQGLPEYIYDPETKRYDQPFITGNCGGEGICGTCLIEVMDGPEMLSEADNLENMLLE--NQPIRWRLSCRTFVGPDNKSGSVKVRAVPQKEMRESRKK 203          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7R9YBT6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBT6_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.290e-51
Identity = 109/258 (42.25%), Postives = 153/258 (59.30%), Query Frame = 2
Query:  305 LTLEGVYKRLKMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGD---GRGLVLIAGVEPDGNAEATG-KIFVGDTLCS-AGIDGDMSRVEALDWDQTV-AVLGRFAGESEIVLVIKRLVKRESIKVQFALPGGSRE-YDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
            L++E +  RL ++   + DG  GL  +DP YG++VVK  VKR PSLG+ L E+    D    R LVL+ G+E  GNA A G  + VGD + + A   G     E  D+D  +  ++G   G  E+ LV+ RLV+R  + + + LP G R      AGSNLRG  ++  + +YD +T RFD PYATG+CAGEG CGTC V +  G DLL+P DR E L+      P+ WR +C+V VG +N+ GTV+V+  PQ+ +  E
Sbjct:   58 LSVEDIADRLAIQVFDMDDGKFGLSCRDPAYGLKVVKTSVKRKPSLGIVLNEMVDASDPSADRALVLVGGLE--GNAAAEGVDLEVGDVITAIADGSGGYISTEGRDYDFLIDTIVGVDPGAEELTLVVNRLVERAMVTINYELPNGDRSSVQAPAGSNLRGIFLQEGVRLYDERTRRFDMPYATGDCAGEGLCGTCLVNVWSGEDLLSPADRNEALICK--GRPMGWRAACRVFVGADNQEGTVEVRLQPQSRFDDE 311          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A7S3P6U2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6U2_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.340e-51
Identity = 112/274 (40.88%), Postives = 164/274 (59.85%), Query Frame = 2
Query:  281 SALTSPAGLTLEGVY---KRLKMETQGLADGVVGLESKDPDYGIEVVKVEV---KRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSAGI-DGDM-SRVEALDWDQTVAVLG-----RFAGESEIVLVIKRLVKRESIKVQFALPGGS-REYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPD-REELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
            S+ T    +T E +Y   +RLK+E   L +G+ G +S+DP YG+EV++ E+     +PSLGL L E+A   DGRGLVL++ V  +     +  I VGD +      DG +  R   L++D+TV  +G        G+  + L + RLVKR +I+VQ   PG +    +  AG NLR  ++R++I +Y+ +T RFD PYATG+CAGEG CGTC V + EG DLL P D  EEL+   R   P+ WR SC+ +VG  N+ GT++V+  PQ+++  E
Sbjct:  109 SSRTDDMEITDEKLYEIARRLKLEIFDLEEGIFGFDSQDPVYGLEVIQTEIPLSSENPSLGLVLTEMAGNKDGRGLVLVSEVTGNAKNARSSPILVGDVITGVRTSDGSLRERTTGLNYDRTVEAVGDVKEAALKGDGTLHLELNRLVKRATIQVQVVQPGKNVTTIEALAGENLRRLLLRKDIRLYNRKTKRFDMPYATGDCAGEGLCGTCLVAVNEGMDLLNPKDGAEELITRGR---PLSWRASCRTVVGSNNEGGTIQVRVQPQSDFEDE 379          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: B7G5I1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I1_PHATC)

HSP 1 Score: 164 bits (415), Expect = 9.410e-42
Identity = 102/268 (38.06%), Postives = 149/268 (55.60%), Query Frame = 2
Query:  290 TSPAGLTLE----GVYKRLKMETQGLADGVVGLESKDPDYGIEVV--KVEVKRDPSLGLQLEEVARGGDGRGLVLIAGVEPDGNAEATGKIFVGDTLCSA-GIDGDMS-RVEALDWDQTVAVLGRFAGESE---IVLVIKRLVKRESIKVQFALPGGSREY-DIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSE 1057
            T+  G TL+     + ++ K+E   L +G+ G +SKD  YG+EVV   ++V  D  LGL L E+A   DGRGLV+++ +  +        I VGDT+      DG +  RV A ++D+TV  +GR    S    I L + RL+KR  ++V+     G  +  +  AG NLR   MR+++ +YD +T RFDQP+ TGNC G+G CGTC V + +G DLL P D  E+ +      P  WR SC+  VG  N  GT+++   PQ+E   E
Sbjct:   38 TASQGATLDQHLMDLAQKFKLEIFDLDEGLFGFDSKDNRYGLEVVHTNIDVGND-GLGLVLTEMAGSPDGRGLVMVSKITGNAAKANPQAIHVGDTITGVMANDGVLKERVTAFNYDKTVEAIGRAKESSTDGTITLELNRLIKRLPVRVEIDDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVLQGMDLLNPKDSHEVFITK--GRPPSWRASCRTTVGFNNVGGTLRISLHPQSELPEE 302          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: D8U521_VOLCA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U521_VOLCA)

HSP 1 Score: 61.2 bits (147), Expect = 8.080e-8
Identity = 34/109 (31.19%), Postives = 55/109 (50.46%), Query Frame = 2
Query:  722 GGSREYDIKAGSNLRGEMMRREIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLL---TPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQ 1039
            G S    +++G  LR  +M  ++ +Y      +        C G G CGTC VE+++GA+LL   TP ++++L     +  P  WRL+C+ +VG     G V +   PQ
Sbjct:   13 GQSLNISVESGDILRTVLMAEKVDLYTTWGKVWQ-------CGGVGNCGTCIVEVRDGAELLSERTPVEKKKL-----SGKPATWRLACQTLVGDGESTGVVTIATKPQ 109          
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Match: A0A2J8AI05_9CHLO (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AI05_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 1.670e-7
Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 2
Query:  830 YATGN----CAGEGTCGTCFVEIQEGADLLTPPDREELLLLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQ 1039
            Y T N    C G G CGTC VE++EGA+LL+     E   LS    P  WRL+C+ +VG   K+G V V   PQ
Sbjct:   19 YTTWNKVWQCGGVGQCGTCIVEVKEGAELLSERTAVEKKKLS--GKPESWRLACQTLVGDGEKSGAVTVATKPQ 90          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LNE9_ECTSI1.000e-15071.65Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CRA8_9STRA2.370e-7149.082Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4DIM7_HETAK1.810e-6747.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CWU2_9STRA2.580e-5744.53PDZ domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S2V297_9STRA5.650e-5349.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YBT6_9STRA1.290e-5142.25Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3P6U2_9STRA2.340e-5140.88Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G5I1_PHATC9.410e-4238.06Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
D8U521_VOLCA8.080e-831.192Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A2J8AI05_9CHLO1.670e-744.592Fe-2S ferredoxin-type domain-containing protein n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5145074..5149064 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score455.3
Seed ortholog evalue2.5e-125
Seed eggNOG ortholog2880.D8LNE9
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009767,GO:0009773,GO:0009987,GO:0010598,GO:0015979,GO:0016020,GO:0019684,GO:0022900,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0055114,GO:0098796
EggNOG free text desc.2Fe-2S iron-sulfur cluster binding domain
EggNOG OGs2S4WU@2759,COG0633@1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionFerredoxin
Ec32 orthologEc-04_004110.1
Exons6
Model size2147
Cds size1035
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.461.1prot_P-fluviatile_contig1.461.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 5146152..5149030 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815339.4220626-UTR-P-fluviatile_contig1:5145073..51461511622815339.4220626-UTR-P-fluviatile_contig1:5145073..5146151Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5145074..5146151 -
1693561552.42766-UTR-P-fluviatile_contig1:5145073..51461511693561552.42766-UTR-P-fluviatile_contig1:5145073..5146151Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5145074..5146151 -
1622815339.492103-UTR-P-fluviatile_contig1:5149030..51490641622815339.492103-UTR-P-fluviatile_contig1:5149030..5149064Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5149031..5149064 -
1693561552.48931-UTR-P-fluviatile_contig1:5149030..51490641693561552.48931-UTR-P-fluviatile_contig1:5149030..5149064Porterinema fluviatile SAG_2381UTRP-fluviatile_contig1 5149031..5149064 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815339.4312682-CDS-P-fluviatile_contig1:5146151..51463371622815339.4312682-CDS-P-fluviatile_contig1:5146151..5146337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5146152..5146337 -
1693561552.4406815-CDS-P-fluviatile_contig1:5146151..51463371693561552.4406815-CDS-P-fluviatile_contig1:5146151..5146337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5146152..5146337 -
1622815339.4393544-CDS-P-fluviatile_contig1:5146614..51467041622815339.4393544-CDS-P-fluviatile_contig1:5146614..5146704Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5146615..5146704 -
1693561552.4500625-CDS-P-fluviatile_contig1:5146614..51467041693561552.4500625-CDS-P-fluviatile_contig1:5146614..5146704Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5146615..5146704 -
1622815339.4479418-CDS-P-fluviatile_contig1:5146842..51469811622815339.4479418-CDS-P-fluviatile_contig1:5146842..5146981Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5146843..5146981 -
1693561552.4575143-CDS-P-fluviatile_contig1:5146842..51469811693561552.4575143-CDS-P-fluviatile_contig1:5146842..5146981Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5146843..5146981 -
1622815339.4604135-CDS-P-fluviatile_contig1:5147211..51473241622815339.4604135-CDS-P-fluviatile_contig1:5147211..5147324Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5147212..5147324 -
1693561552.4670296-CDS-P-fluviatile_contig1:5147211..51473241693561552.4670296-CDS-P-fluviatile_contig1:5147211..5147324Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5147212..5147324 -
1622815339.4698324-CDS-P-fluviatile_contig1:5147878..51480191622815339.4698324-CDS-P-fluviatile_contig1:5147878..5148019Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5147879..5148019 -
1693561552.4744933-CDS-P-fluviatile_contig1:5147878..51480191693561552.4744933-CDS-P-fluviatile_contig1:5147878..5148019Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5147879..5148019 -
1622815339.4812603-CDS-P-fluviatile_contig1:5148664..51490301622815339.4812603-CDS-P-fluviatile_contig1:5148664..5149030Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5148665..5149030 -
1693561552.4819171-CDS-P-fluviatile_contig1:5148664..51490301693561552.4819171-CDS-P-fluviatile_contig1:5148664..5149030Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 5148665..5149030 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.461.1

>prot_P-fluviatile_contig1.461.1 ID=prot_P-fluviatile_contig1.461.1|Name=mRNA_P-fluviatile_contig1.461.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=345bp
MSTTLSLGNTTRRASTLAFLLLSLALQLHSGYSFLLPATAATHCHHISRP
APSSKTTALASAPTHVQAEEGGGDEEQELEQDSALTSPAGLTLEGVYKRL
KMETQGLADGVVGLESKDPDYGIEVVKVEVKRDPSLGLQLEEVARGGDGR
GLVLIAGVEPDGNAEATGKIFVGDTLCSAGIDGDMSRVEALDWDQTVAVL
GRFAGESEIVLVIKRLVKRESIKVQFALPGGSREYDIKAGSNLRGEMMRR
EIPVYDPQTLRFDQPYATGNCAGEGTCGTCFVEIQEGADLLTPPDREELL
LLSRANLPVRWRLSCKVIVGKENKAGTVKVKAIPQAEWRSEKKK*
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mRNA from alignment at P-fluviatile_contig1:5145074..5149064-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.461.1 ID=mRNA_P-fluviatile_contig1.461.1|Name=mRNA_P-fluviatile_contig1.461.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3991bp|location=Sequence derived from alignment at P-fluviatile_contig1:5145074..5149064- (Porterinema fluviatile SAG_2381)
CTCGTATTCTCGCAGCTTAGTGCGAGTGCGCAACATGAGCACGACCCTGA GCCTTGGCAACACGACCCGGAGAGCGTCAACCCTGGCCTTCCTCTTGCTT TCCCTGGCCCTCCAGCTTCACAGCGGGTATTCTTTCCTGCTTCCCGCCAC AGCCGCCACACATTGCCACCACATCTCGCGGCCTGCTCCGTCCAGCAAGA CGACAGCCTTGGCATCCGCACCAACGCACGTGCAGGCCGAGGAAGGAGGC GGCGACGAAGAGCAGGAACTTGAACAAGATAGTGCCTTGACAAGCCCCGC CGGGCTCACGTTGGAGGGTGTGTACAAGCGGCTGAAGATGGAGACGCAGG GCCTCGCGGACGGAGTTGTCGGACTCGAATCGAAGGACCCAGATTATGGA GTAAGTCCTTGTAGACGAGAGAGCGGGCGGGAGAAAGCGCGCTGGAAATC TGGATGTTTCCGTGTGTAATTACTCCGGAGCTGGAGTGATCTATATGTTG CTCGGCCAGAGGAACTTTCGAGCACAGAGGAGCCGTGTCGTAGGTTGAGT AGGAAATAAAATGCAGGCAATCGGTCGTCCCATAGTAGCGTAAATGTCAA AAACAAAATATGTGCTCCCTGTAAATGATGTCTACGCAGATAGCCCTGGT GGTACCGCTTCGGGTAGACTGGGTGCGTGTGTGGATGTGACACTTACAAG GGTCGGTATCCCAAACGTCTGTCGAGGATGGAACCCTCTTTTCCACGTTT GTGCGCTTTTGGAAAAAATGCGCGGATCTTTTATGCACGGATCTTTTTTT TCGAAATGATCAGTTTGACACTGTCATTCGATCAGGAGGCGGATTGAGCA CGATATGTATCTATCAAATACAGCTACGAGACTAACTAACTCCAAGGGCA TAAGACGAGGTGGGGATTCGATCCAAAGCCTCATAATATCCGGGATTTTC AACCAGCCGTGCACATGGTATGGAAACCTCTCTTTCTGGCGCACAACACT TGTCCTTTCACCTTCCTGAAATCCATTTGAAAATGCACGCGACAGATCGA GGTCGTCAAGGTTGAGGTAAAACGCGATCCTTCCCTTGGCCTACAGCTCG AGGAGGTGGCGCGAGGTGGCGATGGGCGCGGCTTGGTGTTGATCGCGGGC GTAGAGCCTGACGGAAACGCGGAAGCCACCGGCAAGGTGAAGCTATCAAG TGGAACGCACATCGCAAGATCCCGCAATGTTCAAACAGCACTGGGTTTTG ATTCGACGTTAACGTTAGGGACGGACATTGTCGTCAAGGGAACCGGAATG CTGGCGAAGCCGTATGCGTGTGTAGTGGCATTAACCGGGGGAGACGCGGA CACTTCAGTCACACAATGCTTCCCCTTTCGCGCAGCAGCTTCACCGTATC CAAGGAATGTTCCACAGAATGAAGGTAGTTTGAGATCAAGCTGCGCGTTG AAGCCTCGCCAGGACTGACCTGCTGTTCGAAGCGGTTCATCGCATGGATC TTTCTGCCCTTCCTGTATATCTCACACTCTTTTCGTGTTCATTTTCCACA TCACGCCCGCCATCCTTTGAGGATCGCGTCGAACAATTCAAGCACTATCA TGTGTGACAGCGGAATGTCACTTGCAACGCAGCCTTCAGGCCTCTGCCGC TCTCGTTGCCACTTCTGCTACTTCTTTCTGCGGGCTGCCGCTTGGCAGCT GATTAGACCATTCCCCTGTCTCGATCTGACTATAAAACAGATTTTTGTGG GTGACACGCTTTGTTCCGCGGGCATCGATGGAGACATGTCGAGGGTGGAG GCTCTCGACTGGGACCAGACTGTTGCCGTCCTGGGGAGATTTGCCGGGGA GAGGTGAGGACCGTGGAGCGCAAAATTTCATGCTGAACGAGACCAATGAA GCCGTTCTGGTTTCGAACCACGACAGATTATGGAAGCATACTTTTCATCG AATTTCGGCTTGGTTTTCAGCTTGGTAGGCATTGCGGCTATTTCATTCAT GTTTATTCTTTTGGCTGCCCGAGTACGTAAGTTCATCGCCGTCGTCCCCC CGCGTACCTTGCCATGTTCTTGGCTACCGTCAGCGAAATCGTGCTGGTCA TCAAACGACTTGTGAAGCGAGAATCCATCAAAGTCCAGTTTGCGCTTCCC GGCGGCAGCCGCGAGTACGACATCAAAGCGGGCTCCAACCTCCGGGGGGA AATGATGCGGCGAGAAATCCCGGTAAGAAATGTCAATGACTTTCATCATG CCACGTTAGCCAAACCATAGCACCGGTGCACTTTCGCGGCATCACGGAAA GCTTTTCATCTGAGTTTGCATCTATGCTTGTATTTGTCCCCCATGTTTTC TTTTCGCGAGGTCTACGACCCCCAAACATTGCGATTTGACCAGCCGTACG CCACCGGCAACTGCGCGGGAGAAGGCACTTGCGGTACCTGCTTCGTAGAG GTGAGTAGCAGGAGGCCGCGACGCTTGCCTGTCACGCGTATGGTTCGACC AGCCGTTGACCCGACGTTGATGCACAGGAGTAGAACACTTATTCTCTTTC AACTGACCCACACTTGCTTCGCACGACCAGTCTCTCAAGTTGATTGCCGA AGAACGAGGAAGCTCACCGTGCACTTAACATGACGCGCATGCCAGGTAGT ATAATGAGATTCATGCGGCTGTGCGAATGTGCATCAGAAGGCATCCGTTC CCCACCGACCTCGTTCGTCTCGACCAGATACAAGAAGGGGCAGACCTTCT CACGCCCCCGGATCGAGAAGAGCTACTTCTTCTCTCAAGGGCAAACTTGC CGGTCAGGTGGCGCTTGTCATGCAAGGTCATCGTCGGGAAGGAAAACAAA GCTGGGACTGTAAAGGTCAAGGCAATTCCACAGGCAGAATGGAGATCAGA GAAGAAAAAATAAACGCAAGAAAGGGCAATCCCGCCTTTGCCCGCCGCCG CGCAGGGCAATAGCTTAGCGAGTTCTGAAGGTTTCTCCCCCTAGTGAGGC ATTTTTTTTCCTGTTTGGAGCTTGTGTATACAGGTAAGGAGGCTTGAAAT AGCGATCGTCCTTGGTAAGTCGGTCAAATATCTACTTGTAGCGTACCGTA GTTCAATGCACCCATACGAGCCACCCTGATTTTTGCCAGAAGGGCTGATT CGGAGCTGCATGGAACTAGAAGGTCAACGGTCAGGCGCTGGCCGAGTTTT GCAGTGGAGAATGGTCGGCACCATCGATCGCAATTCTTATCATTCAACAA TCTTCCTTCGCTGCTGTTTAGGTTGTTTCATATTGCCTCATTGGAGTCCA AAAAAAGAGCGCGCGGACGACGCTTTTGGAAAAATCAAACTAGGCAGATC CCAGAGTGGGCGTTGAGCTTAAAGGTGCAAATCCTATTATATTACCTCTC CATCGTTGAGGGAAACAGACACGGGTGAAGTCCATGTACAGGCCGGCCAG AGTTTTGCTTTTTGGGGGGAAGAACAAATGGCGGTAAGTTTTACCTTTGG GTCCATGGCGGGGGGCGTGTCGAGCAATCTGTAACCAAAGGGTTTCACGT ATGCCTTTCGTTTACGGCACACGAATGCCTTCAGCTTACGGCAAACCATG GTTTGGGTACTTTAGTAGCGTTCTCCCGTCCATGAGTCGGCGAAGATGAA TGGGAACCAAATGCTGAAGCGGGAAAGCGGTAGGTCATTCAGTTGAGGCA CAACAGTGCGCAGGAAGAGAGTTTTTGAGATATCTGCCGGGATGAAAACG GAGAGAGTAGTGTGCTGGGCGTTTTGGCGTCATCATCCCTTACCTAGTAG GGGGTCCTTCATCTTTTTCTCTGTTCGGAACTCTAAGCACTGAAGAAAGT GTTGGTACTGTACAGGTCGATAGGAAGACTAGTTGAATAAATGATCGCTA CCACCTCTAAAATCGCCGAAGTTTATTCCAATCAATATGGCAAGCATTGG TTTCTGTTGAGGAAAAGAGAAATGCTAACATTTTTTCTGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:5145074..5149064-

>mRNA_P-fluviatile_contig1.461.1 ID=mRNA_P-fluviatile_contig1.461.1|Name=mRNA_P-fluviatile_contig1.461.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2070bp|location=Sequence derived from alignment at P-fluviatile_contig1:5145074..5149064- (Porterinema fluviatile SAG_2381)
ATGAGCACGACCCTGAGCCTTGGCAACACGACCCGGAGAGCGTCAACCCT
GGCCTTCCTCTTGCTTTCCCTGGCCCTCCAGCTTCACAGCGGGTATTCTT
TCCTGCTTCCCGCCACAGCCGCCACACATTGCCACCACATCTCGCGGCCT
GCTCCGTCCAGCAAGACGACAGCCTTGGCATCCGCACCAACGCACGTGCA
GGCCGAGGAAGGAGGCGGCGACGAAGAGCAGGAACTTGAACAAGATAGTG
CCTTGACAAGCCCCGCCGGGCTCACGTTGGAGGGTGTGTACAAGCGGCTG
AAGATGGAGACGCAGGGCCTCGCGGACGGAGTTGTCGGACTCGAATCGAA
GGACCCAGATTATGGAATGAGCACGACCCTGAGCCTTGGCAACACGACCC
GGAGAGCGTCAACCCTGGCCTTCCTCTTGCTTTCCCTGGCCCTCCAGCTT
CACAGCGGGTATTCTTTCCTGCTTCCCGCCACAGCCGCCACACATTGCCA
CCACATCTCGCGGCCTGCTCCGTCCAGCAAGACGACAGCCTTGGCATCCG
CACCAACGCACGTGCAGGCCGAGGAAGGAGGCGGCGACGAAGAGCAGGAA
CTTGAACAAGATAGTGCCTTGACAAGCCCCGCCGGGCTCACGTTGGAGGG
TGTGTACAAGCGGCTGAAGATGGAGACGCAGGGCCTCGCGGACGGAGTTG
TCGGACTCGAATCGAAGGACCCAGATTATGGAATCGAGGTCGTCAAGGTT
GAGGTAAAACGCGATCCTTCCCTTGGCCTACAGCTCGAGGAGGTGGCGCG
AGGTGGCGATGGGCGCGGCTTGGTGTTGATCGCGGGCGTAGAGCCTGACG
GAAACGCGGAAGCCACCGGCAAGATCGAGGTCGTCAAGGTTGAGGTAAAA
CGCGATCCTTCCCTTGGCCTACAGCTCGAGGAGGTGGCGCGAGGTGGCGA
TGGGCGCGGCTTGGTGTTGATCGCGGGCGTAGAGCCTGACGGAAACGCGG
AAGCCACCGGCAAGATTTTTGTGGGTGACACGCTTTGTTCCGCGGGCATC
GATGGAGACATGTCGAGGGTGGAGGCTCTCGACTGGGACCAGACTGTTGC
CGTCCTGGGGAGATTTGCCGGGGAGAGATTTTTGTGGGTGACACGCTTTG
TTCCGCGGGCATCGATGGAGACATGTCGAGGGTGGAGGCTCTCGACTGGG
ACCAGACTGTTGCCGTCCTGGGGAGATTTGCCGGGGAGAGCGAAATCGTG
CTGGTCATCAAACGACTTGTGAAGCGAGAATCCATCAAAGTCCAGTTTGC
GCTTCCCGGCGGCAGCCGCGAGTACGACATCAAAGCGGGCTCCAACCTCC
GGGGGGAAATGATGCGGCGAGAAATCCCGCGAAATCGTGCTGGTCATCAA
ACGACTTGTGAAGCGAGAATCCATCAAAGTCCAGTTTGCGCTTCCCGGCG
GCAGCCGCGAGTACGACATCAAAGCGGGCTCCAACCTCCGGGGGGAAATG
ATGCGGCGAGAAATCCCGGTCTACGACCCCCAAACATTGCGATTTGACCA
GCCGTACGCCACCGGCAACTGCGCGGGAGAAGGCACTTGCGGTACCTGCT
TCGTAGAGGTCTACGACCCCCAAACATTGCGATTTGACCAGCCGTACGCC
ACCGGCAACTGCGCGGGAGAAGGCACTTGCGGTACCTGCTTCGTAGAGAT
ACAAGAAGGGGCAGACCTTCTCACGCCCCCGGATCGAGAAGAGCTACTTC
TTCTCTCAAGGGCAAACTTGCCGGTCAGGTGGCGCTTGTCATGCAAGGTC
ATCGTCGGGAAGGAAAACAAAGCTGGGACTGTAAAGGTCAAGGCAATTCC
ACAGGCAGAATGGAGATCAGAGAAGAAAAAATAAATACAAGAAGGGGCAG
ACCTTCTCACGCCCCCGGATCGAGAAGAGCTACTTCTTCTCTCAAGGGCA
AACTTGCCGGTCAGGTGGCGCTTGTCATGCAAGGTCATCGTCGGGAAGGA
AAACAAAGCTGGGACTGTAAAGGTCAAGGCAATTCCACAGGCAGAATGGA
GATCAGAGAAGAAAAAATAA
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