mRNA_P-fluviatile_contig22.4822.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4822.1
Unique NamemRNA_P-fluviatile_contig22.4822.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A6H5JJI9_9PHAE (SPRY domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI9_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 2.120e-137
Identity = 238/471 (50.53%), Postives = 282/471 (59.87%), Query Frame = 1 
Query:  292 DLTPQDICRCMVGAWPTFIDRHWEQDELIQAMVDGVFEPLR-------IDGAGSAPDNTDGIGXXXXXXXXXXXXXXXXXXXXTASLAGLCTGVAFRGRIGGDRAVRANIPFPLLGTIDVRRNGAIFRPRERDFTSGC-VVMARRNPYRPRVQMRYPDEFLARVKEEAPFAFLWPGHAAAKSKDLEATSAGDGXXXXXXXXXXXXXXXXXXXXGDDANGELQHELE----EIERLPGSGPAPFFHAGYTAYFEISLGEKLPPLQEPQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHR-CQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGR----PCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFGAKAFAFDLPAFETIFTGAS-----PSSSTAAETSILRRVYSRGNGVVNPRLLCPYIRL 1638
            +LT QDICRCMVGAWPT IDRHW  DEL+QA + GV +PL+       + G+G+ P+N                         TA  AGLC GV FRG +GGDRAVRAN+PFP  G    R       P   D + G  +V      Y   V + YPD  LARVK  APFA LWPGHAAA         +G+                     G+  +G L  E E    ++ERLP SGPAPFFHAGYTAYFEI+LG+ + PL++P+D+DFH +  CVAIGLA D F LE KQPGWDR+SWG HSDDG +HHR   A   T  PTTFGPGDTVGCGLLYPRGLA Y+     GR    P     DS   +GA+FFTKNGR+LG+A   V+V KRPLYP +GLDSHCCVT NFG K FAFD+PAFE +FTGA+     P       T  ++ VY   NG  NPRLLCP++RL
Sbjct:  115 NLTLQDICRCMVGAWPTHIDRHWRADELLQASIGGVLQPLQAGAAGGGVSGSGADPENAQ--------------------QADTALAAGLCDGVVFRGGLGGDRAVRANVPFPWAGCGRTRTQP----PCGADMSRGARLVRMELTTYDRPVYLHYPDVVLARVKAGAPFALLWPGHAAAAGGGEGEGGSGE-----------------DSRGGNVGHGGLVDENERVRLKVERLPSSGPAPFFHAGYTAYFEITLGDTMAPLEQPRDEDFHLEQ-CVAIGLAHDNFPLEDKQPGWDRNSWGLHSDDGCFHHRGAIALPATADPTTFGPGDTVGCGLLYPRGLAHYEHWLS-GRGGALPTAGENDSGGNNGAVFFTKNGRYLGMASRRVNV-KRPLYPCVGLDSHCCVTVNFGVKPFAFDVPAFEALFTGAALGSAPPVRERRCHTDDIKNVYCGRNGFTNPRLLCPHLRL 541
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: D7G760_ECTSI (SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G760_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 4.590e-81
Identity = 181/459 (39.43%), Postives = 213/459 (46.41%), Query Frame = 1 
Query:  292 DLTPQDICRCMVGAWPTFIDRHWEQDELIQAMVDGVFEPLRIDGAGSAPDNTDGIGXXXXXXXXXXXXXXXXXXXXTASLAGLCTGVAFRGRIGGDRAVRANIPFPLLGTIDVRRNGAIFRPRERDFTSGCVVMARRNPYRPRVQMRYPDEFLARVKEEAPFAFLWPGHAAAKSKDLEATSAGDGXXXXXXXXXXXXXXXXXXXXGDDANGELQHELEEIERLPGSGPAPFFHAGYTAYFEISLGEKLPPLQEPQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHR-CQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGR----PCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFGAKAFAFDLPAFETIFTGAS-----PSSSTAAETSILRRVYSRGNGVVNPRLLCPYIRL 1638
            +LT QDICRCMVGAWPT IDRHW  DEL+QA + GV +PL+   A      +D                       TA  AGLC GV FRG +GGDRAVRAN+PFP  G    R      RPR  D + G  +                                                                               ++ EL   +R   +       A  TA  E+S                       A    R R   + KQPGWDR+SWG HSDDG +HHR   A S T  PTTFGPGDTVGCGLLYPRGLA Y+     GR    P     DS    GAIFFTKNGR+LG+A   V+V KRPLYP +GLDSHCCV  NFGAK FAFD+PAFE +FTGA+     P       T  +++VYS  NG  NPR+LCP++RL
Sbjct:   91 NLTLQDICRCMVGAWPTHIDRHWRADELLQASIGGVLQPLQAGAASGGVSGSDA-------------DPENAQRADTALAAGLCDGVVFRGGLGGDRAVRANVPFPWAGCGRTRSQ----RPRGADMSRGSSL-------------------------------------------------------------------------------VKMELTTYDRAKAA-------AARTAAVEMS---------------------GTAGWSTRTR---KDKQPGWDRNSWGLHSDDGCFHHRGAIALSATADPTTFGPGDTVGCGLLYPRGLAHYEHWLS-GRGGALPTAGENDSGGSKGAIFFTKNGRYLGMASRRVNV-KRPLYPCVGLDSHCCVAVNFGAKPFAFDVPAFEALFTGAALGSAPPVRERRCHTDDIKKVYSGRNGFTNPRVLCPHLRL 420
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A7S0CWD3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CWD3_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 1.340e-24
Identity = 64/159 (40.25%), Postives = 79/159 (49.69%), Query Frame = 1 
Query: 1003 AYFEISLGEKLPPLQEPQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGRPCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFG 1479
            AYFE+ + +         D+D + D  C+AIGLAR  F L GKQPGWD  S+G+H DDG   H         S   FGPGD VGCG+ Y                          + +IFFTKNG FLG+AF DV       YPV+G+D+ C    NFG
Sbjct:   42 AYFEVQIEQNF------DDEDMNKDGSCIAIGLARRSFLLTGKQPGWDSFSYGYHGDDGNIFHGSGMGEEFGS--AFGPGDVVGCGIDYT-------------------------NRSIFFTKNGAFLGVAFEDV--LPGHYYPVVGVDTRCPFRVNFG 165
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A5A8DVX2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DVX2_CAFRO)

HSP 1 Score: 114 bits (284), Expect = 1.020e-22
Identity = 77/177 (43.50%), Postives = 90/177 (50.85%), Query Frame = 1 
Query: 1003 AYFEISLGEKLPPLQEPQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSP--TTFGPGDTVGCGLLYPRGLALYDRRFHLGRPC-PEGTDSVDCDGA-IFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFGAKA---FAFDLPAF 1512
            AYFE+S+G         +       S CVA+GL   RF L G  PGWDRHS+G+HSDDGF  H    SS   SP    FGPGD VGCGL                 PC P  +   D   A IFFT NGR +G AF  VD  +R  +PV+G+D    V  NFG+ A   FAF L  F
Sbjct:  216 AYFEVSIGRAHRDWTPGR-------SSCVAVGLCTRRFVLAGCLPGWDRHSYGWHSDDGFVFH----SSGHGSPFGPAFGPGDVVGCGLDT--------------LPCLPTDSRGFDSSAARIFFTLNGRMVGYAFEAVDAARR-WHPVVGIDGPAPVRVNFGSDAREPFAFPLARF 366
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A813CPA2_9DINO (Ranbp9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CPA2_9DINO)

HSP 1 Score: 110 bits (276), Expect = 4.500e-22
Identity = 76/177 (42.94%), Postives = 89/177 (50.28%), Query Frame = 1 
Query: 1003 AYFEISLGEKLPPLQEPQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSP--TTFGPGDTVGCGLLYPRGLALYDRRFHLGRPC-PEGTDSVDCDGA-IFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFGAKA---FAFDLPAF 1512
            AYFE+S+G         +       S CVA+GL   RF L G  PGWDRHS+G+HSDDGF  H    SS   SP    FG GD VGCGL                 PC P  +   D   A IFFT NGR +G AF  VD  +R  +PV+G+D    V  NFG+ A   FAF L  F
Sbjct:  214 AYFEVSIGRAHRDWTPGR-------SSCVAVGLCTRRFVLAGCLPGWDRHSYGWHSDDGFVFH----SSGHGSPFGPAFGQGDVVGCGLDT--------------LPCLPTDSRGFDSSAARIFFTLNGRMVGYAFEAVDAARR-WHPVVGIDGPAPVRVNFGSDAREPFAFPLARF 364
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A835ZEA9_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.570e-21
Identity = 70/176 (39.77%), Postives = 89/176 (50.57%), Query Frame = 1 
Query:  991 AGYTAYFEISLGEKLPPLQEPQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGRPCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFGAKA-FAFDLPAFE 1515
            A   +YFE+S+  +                +C+AIGL+ ++F L+GK PGWD  S+G+HSDDG   H   +      PT FG GD VGCGL Y  G          G  C +          IFFT NGR+LG+AF    VR   LYP +G+DS   V  N G  A FAF + AFE
Sbjct: 1271 ARVVSYFEVSIAPRTGARGAGV-------PECIAIGLSEEQFTLQGKMPGWDSCSYGYHSDDGGAFHNAGSMLFRYGPT-FGRGDVVGCGLDYSHG----------GGVCAD----------IFFTLNGRYLGVAF--AGVRAGGLYPTVGIDSAAPVRINLGGAAPFAFGVGAFE 1416
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A7S2TPV5_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TPV5_9EUKA)

HSP 1 Score: 107 bits (268), Expect = 4.350e-21
Identity = 70/166 (42.17%), Postives = 81/166 (48.80%), Query Frame = 1 
Query: 1003 AYFEISLGEKLPPLQEPQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGRPCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFG-AKAFAF 1497
            AY+EI +    P   EP      FD +C+AIGLAR  F L GKQPGWD  S+G+H DDG   H      H   P  FGPGD VGCGL Y            L R             +IFFTKNG  LG AF  +       YPV+G+D+    T NFG  K F F
Sbjct:  311 AYYEIEIDR--PTKLEP------FDGNCIAIGLARAEFPLTGKQPGWDSCSYGYHGDDGNIFHSSGMGIHYGQP--FGPGDVVGCGLDY------------LTR-------------SIFFTKNGAVLGTAFERIPPGS--YYPVVGVDTRAPFTINFGLTKPFVF 439
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A7S4S3F7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S3F7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 7.060e-21
Identity = 57/149 (38.26%), Postives = 78/149 (52.35%), Query Frame = 1 
Query: 1072 FDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGRPCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVR--KRPLYPVIGLDSHCCVTANFGAKAFAFDLPAF 1512
            F  +CVA+GL+   F  + K PGWD+HS+G+H DDG   H    + H   PT FG  DTVGCG+ Y                            ++FFT NG+FL  AF  + V   ++ LYP +G+D++C +  NFG K F FDL +F
Sbjct:  581 FHKECVAVGLSTKSFDTQHKMPGWDKHSYGYHGDDGGIFHAGGNTIHKIGPT-FGVNDTVGCGIDYKA-------------------------KSVFFTLNGKFLVFAFTQLSVSTLRKGLYPTVGVDTNCPLFINFGEKPFEFDLASF 703
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A7S4S4K4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S4K4_9STRA)

HSP 1 Score: 107 bits (268), Expect = 7.860e-21
Identity = 57/149 (38.26%), Postives = 78/149 (52.35%), Query Frame = 1 
Query: 1072 FDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGRPCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVR--KRPLYPVIGLDSHCCVTANFGAKAFAFDLPAF 1512
            F  +CVA+GL+   F  + K PGWD+HS+G+H DDG   H    + H   PT FG  DTVGCG+ Y                            ++FFT NG+FL  AF  + V   ++ LYP +G+D++C +  NFG K F FDL +F
Sbjct:  654 FHKECVAVGLSTKSFDTQHKMPGWDKHSYGYHGDDGGIFHAGGNTIHKIGPT-FGVNDTVGCGIDYKA-------------------------KSVFFTLNGKFLVFAFTQLSVSTLRKGLYPTVGVDTNCPLFINFGEKPFEFDLASF 776
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BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Match: A0A7S3RFF7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RFF7_EMIHU)

HSP 1 Score: 99.0 bits (245), Expect = 1.180e-18
Identity = 74/199 (37.19%), Postives = 92/199 (46.23%), Query Frame = 1 
Query: 1003 AYFEISLGEKLPPLQE----PQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGRPCPEGTDSVDCDGAIFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFGAKAFAFDLPAFETIFTGASPSSSTAAETSILRRVYS 1587
            AYFE+++  +     E    PQ       SDCVA+GL    F L+G+QPGWD  S+G+HSDDG   H   AS     P    PGD VG G       +L  RR                   +FF++NG FLG  +     +  PLYP++GLDS   V  NFGA  FA D        T + P S     TS L RV S
Sbjct:  224 AYFEVTIWPRGGGAAELEWLPQ-------SDCVAVGLGSRDFPLDGRQPGWDSASFGYHSDDGQAFHGHGASGRPLGPAC-SPGDVVGAGY------SLLSRR-------------------VFFSRNGVFLGAPYV-APAQLMPLYPLVGLDSRAPVEFNFGASPFALD--------TASLPPSLHRPATSKLARVTS 380
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJI9_9PHAE2.120e-13750.53SPRY domain-containing protein (Fragment) n=1 Tax=... [more]
D7G760_ECTSI4.590e-8139.43SPRY domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S0CWD3_9EUKA1.340e-2440.25Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A5A8DVX2_CAFRO1.020e-2243.50Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A813CPA2_9DINO4.500e-2242.94Ranbp9 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A835ZEA9_9STRA1.570e-2139.77B30.2/SPRY domain-containing protein n=1 Tax=Tribo... [more]
A0A7S2TPV5_9EUKA4.350e-2142.17Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S4S3F7_9STRA7.060e-2138.26Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4S4K4_9STRA7.860e-2138.26Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3RFF7_EMIHU1.180e-1837.19Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:1022588..1025691 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score276.9
Seed ortholog evalue2e-71
Seed eggNOG ortholog2880.D7G760
EggNOG free text desc.protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
EggNOG OGsKOG1477@1,KOG1477@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSPRY domain
Ec32 orthologEc-01_010930.1
Exons5
Model size1671
Cds size1671
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4822.1prot_P-fluviatile_contig22.4822.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 1022588..1025691 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815973.7497504-CDS-P-fluviatile_contig22:1022587..10237111622815973.7497504-CDS-P-fluviatile_contig22:1022587..1023711Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1022588..1023711 +
1693563910.145159-CDS-P-fluviatile_contig22:1022587..10237111693563910.145159-CDS-P-fluviatile_contig22:1022587..1023711Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1022588..1023711 +
1622815973.7631311-CDS-P-fluviatile_contig22:1024185..10243361622815973.7631311-CDS-P-fluviatile_contig22:1024185..1024336Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1024186..1024336 +
1693563910.157343-CDS-P-fluviatile_contig22:1024185..10243361693563910.157343-CDS-P-fluviatile_contig22:1024185..1024336Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1024186..1024336 +
1622815973.7721386-CDS-P-fluviatile_contig22:1024664..10248081622815973.7721386-CDS-P-fluviatile_contig22:1024664..1024808Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1024665..1024808 +
1693563910.1673486-CDS-P-fluviatile_contig22:1024664..10248081693563910.1673486-CDS-P-fluviatile_contig22:1024664..1024808Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1024665..1024808 +
1622815973.7829635-CDS-P-fluviatile_contig22:1024986..10251271622815973.7829635-CDS-P-fluviatile_contig22:1024986..1025127Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1024987..1025127 +
1693563910.1785522-CDS-P-fluviatile_contig22:1024986..10251271693563910.1785522-CDS-P-fluviatile_contig22:1024986..1025127Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1024987..1025127 +
1622815973.7951968-CDS-P-fluviatile_contig22:1025580..10256911622815973.7951968-CDS-P-fluviatile_contig22:1025580..1025691Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1025581..1025691 +
1693563910.187382-CDS-P-fluviatile_contig22:1025580..10256911693563910.187382-CDS-P-fluviatile_contig22:1025580..1025691Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 1025581..1025691 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4822.1

>prot_P-fluviatile_contig22.4822.1 ID=prot_P-fluviatile_contig22.4822.1|Name=mRNA_P-fluviatile_contig22.4822.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=557bp
MPWNAAARHLWKSALLEGVEIQRVEAAGLPTTARAGELSEREQEGCIREG
CRTRLGPLFSLREISAMNMKGAMHTCFCAQDVFAFRYHPMPRSICVADLT
PQDICRCMVGAWPTFIDRHWEQDELIQAMVDGVFEPLRIDGAGSAPDNTD
GIGGTGGGGGGSGGRGSNTTATATASLAGLCTGVAFRGRIGGDRAVRANI
PFPLLGTIDVRRNGAIFRPRERDFTSGCVVMARRNPYRPRVQMRYPDEFL
ARVKEEAPFAFLWPGHAAAKSKDLEATSAGDGGSGGGSGGRRGYGGGGGS
SSGDDANGELQHELEEIERLPGSGPAPFFHAGYTAYFEISLGEKLPPLQE
PQDDDFHFDSDCVAIGLARDRFKLEGKQPGWDRHSWGFHSDDGFYHHRCQ
ASSHTDSPTTFGPGDTVGCGLLYPRGLALYDRRFHLGRPCPEGTDSVDCD
GAIFFTKNGRFLGIAFNDVDVRKRPLYPVIGLDSHCCVTANFGAKAFAFD
LPAFETIFTGASPSSSTAAETSILRRVYSRGNGVVNPRLLCPYIRLTEEE
EEEEEED
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mRNA from alignment at P-fluviatile_contig22:1022588..1025691+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4822.1 ID=mRNA_P-fluviatile_contig22.4822.1|Name=mRNA_P-fluviatile_contig22.4822.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3104bp|location=Sequence derived from alignment at P-fluviatile_contig22:1022588..1025691+ (Porterinema fluviatile SAG_2381)
ATGCCCTGGAATGCTGCCGCGCGCCATCTCTGGAAGTCTGCCTTGCTGGA
AGGTGTAGAGATCCAACGAGTTGAAGCAGCTGGTCTCCCCACAACTGCTC
GAGCTGGTGAGTTGTCGGAACGAGAGCAGGAAGGGTGTATAAGAGAAGGA
TGTCGCACGCGCCTGGGCCCCCTCTTCTCGCTTCGTGAAATCTCAGCCAT
GAACATGAAAGGAGCAATGCACACATGCTTTTGTGCCCAAGATGTCTTCG
CCTTCCGATACCACCCGATGCCCCGCTCTATCTGTGTAGCCGACCTTACG
CCTCAGGACATCTGCCGCTGCATGGTGGGTGCTTGGCCAACTTTCATCGA
CCGACATTGGGAACAAGACGAACTTATTCAAGCAATGGTTGATGGCGTTT
TCGAGCCCCTCCGAATCGACGGCGCTGGTTCGGCACCGGACAACACCGAT
GGCATCGGCGGCACCGGCGGTGGTGGCGGCGGCAGCGGCGGCAGAGGCAG
CAACACCACAGCAACGGCAACAGCCTCGCTGGCAGGGCTTTGCACCGGCG
TTGCCTTCAGGGGGCGGATCGGAGGAGACCGCGCGGTCCGCGCGAACATC
CCGTTTCCACTTCTTGGTACCATAGATGTCCGTCGGAACGGCGCAATTTT
CAGGCCTCGCGAGCGGGACTTCACCTCCGGTTGCGTCGTCATGGCGCGGC
GCAACCCATACCGCCCGCGTGTCCAGATGCGGTACCCCGACGAATTTCTC
GCGCGCGTTAAGGAGGAGGCACCGTTCGCCTTTCTCTGGCCTGGGCACGC
CGCTGCCAAGAGTAAAGACTTGGAGGCGACCTCGGCGGGAGACGGCGGCA
GCGGCGGCGGTAGCGGCGGCCGCCGCGGCTACGGCGGTGGTGGCGGCAGT
TCCAGCGGCGATGACGCGAACGGCGAGCTGCAGCACGAGCTCGAGGAAAT
CGAGCGGCTGCCGGGCTCAGGCCCCGCGCCATTCTTCCACGCTGGCTACA
CCGCCTACTTCGAGATCTCTCTCGGGGAAAAGTTGCCGCCGCTGCAGGAG
CCGCAGGACGACGACTTCCACTTCGACTCGGACTGTGTGGCGATCGGACT
GGCTAGGGACCGCTTCAAACTCGAGTGAGTGAATCAAGTGAGCGAGTAAT
CGTTCAAGACCGCGTGATTGTACGTGTCTTGTGCTATGGTATTTTGACGA
TGTGGCAGCCGGCTGGTTGGTTGGCTGGTTGGCTGGTTGGTTTCCGCCTG
TCCGCCGTGCGTCCTCCTGCACCGTTCATGTCACCCGTTTCAGTCCTGTT
TCCGGGTGCCGACGCCGCACACTAATATGTTTCCGCCGCGGCCTTGGGTG
TTGCACCACAAGCATGCGTGAAAACTCTCTCGTCGGCGTTGCAGTTTTTT
GCTTCCCTCGTCCGCTTCCTGTCGGCGCGAACGCATGTCCTTGTCGAAGA
TTTGGAGGGCGAGCAAACCAGCTCATGCATGGGGAGAAGCAGCTCCGCTC
TATCAAGGATGCGCGTAAGGCGTAAGCTGTTGTTCCCGACCGCTTTCTTT
TGCGTCTTCGTTTTGTCGCCGGCCGTGACACCGACGACAACGAACCAGGG
GGAAGCAGCCGGGCTGGGACCGCCACAGCTGGGGGTTTCACTCGGACGAC
GGCTTCTATCACCACCGCTGCCAGGCTTCGTCGCACACCGACAGCCCGAC
GACATTCGGGCCCGGCGACACTGTAGGCTGTGGCCTGCTCTACCCACGGG
TGAGGGCGGGAGAGAGCTCCTGCCGCAGGCGAATGCATCGGCATGTCACA
GAGTTTCCGTTTTGACGCCTTGACGTAGCGTTGTTTCTGAGTTTTCGCTT
CGAAAGCATAAGTGTCATGTCTCCTGCATTTGCTATCGCGGGATGGCTTT
CTTGTTTTGCAGGGCAGCGGCTGTTTTTTCGGCCTCTTTCTGCGAAGCCG
CTCACATCGTTCTTGTTTATCATACTCAAAGCACACCTCTTTGCCTGTGC
CACATTCCTACATCGCTTCGTGCCAACAGCCGTGATACAATTCCCATTTC
GCATGTTGTCTTCGCTTCCATGAACAGGGATTGGCGCTCTACGACCGCCG
TTTCCACCTCGGTCGACCCTGCCCGGAGGGAACTGACTCCGTCGACTGCG
ATGGAGCGATTTTCTTCACCAAGAACGGCCGTTTCCTTGGGATAGCGTTC
AACGACGTTGATGTTCGCAAGGTGGAATGACACAACATCGCAAGCAAGCG
CACGCATTTCCCCCCGCTTTCGGCTGCTGGGGCAGTCGAGTGCGACAACT
TGGTAAGTCACCGCGCCGTTCCATGCCGGGCTGATCGCTTGGTCTGCCAC
CACCGCCGTATCCGCCGCGTCTTTTTTCCGATCCCGAATCTGTGGACAGA
GACCGCTATACCCCGTCATCGGGCTCGACAGCCATTGTTGCGTCACCGCC
AACTTCGGAGCGAAAGCGTTCGCCTTCGACCTGCCTGCCTTCGAGACGAT
CTTCACCGGCGCGTCGCCAAGCAGCTCCACAGCGGCCGAGGTAAACTAAC
GAAAGGACAGGGGCTTTTGCTTCGTGATTCACTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCCCCTCTcCCTCTCCCTCTTTCTCTCT
CTTTCTCTGTGTGTCGGCCTGTCTGTCTGTCTTTGACAAAACGGAAAAGG
GTGTCTGCACGAAAAACGTCGGGATTGCTAGGGCATTGCTGGGGCTCCCG
CCGTCCTCCTTTCTCCATTTTTGTTCTGAGCTGGCTTGGGCTCAGACTGC
GGTTGCACTTCTGATACAACAGCCCTCAGTGATTGCTCGCGCAATGGCAA
GCGCTCGTGCAACTCTTTTGCGGAGAATATTTTTACAATGTGTTGGTGGT
GTAATGTCCAGCACTCGGAGATACAGAACGGCCCAGTCTGTCGACACTAG
CGTTGCCCAGCTAAAAGTAGTTGCCATCGCGCCTTTCACGCAGACGTCCA
TCCTCCGAAGGGTTTACTCGAGAGGGAACGGGGTAGTCAACCCCCGGCTT
CTGTGCCCGTACATACGACTCACGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig22:1022588..1025691+

>mRNA_P-fluviatile_contig22.4822.1 ID=mRNA_P-fluviatile_contig22.4822.1|Name=mRNA_P-fluviatile_contig22.4822.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3342bp|location=Sequence derived from alignment at P-fluviatile_contig22:1022588..1025691+ (Porterinema fluviatile SAG_2381)
ATGCCCTGGAATGCTGCCGCGCGCCATCTCTGGAAGTCTGCCTTGCTGGA
AGGTGTAGAGATCCAACGAGTTGAAGCAGCTGGTCTCCCCACAACTGCTC
GAGCTGGTGAGTTGTCGGAACGAGAGCAGGAAGGGTGTATAAGAGAAGGA
TGTCGCACGCGCCTGGGCCCCCTCTTCTCGCTTCGTGAAATCTCAGCCAT
GAACATGAAAGGAGCAATGCACACATGCTTTTGTGCCCAAGATGTCTTCG
CCTTCCGATACCACCCGATGCCCCGCTCTATCTGTGTAGCCGACCTTACG
CCTCAGGACATCTGCCGCTGCATGGTGGGTGCTTGGCCAACTTTCATCGA
CCGACATTGGGAACAAGACGAACTTATTCAAGCAATGGTTGATGGCGTTT
TCGAGCCCCTCCGAATCGACGGCGCTGGTTCGGCACCGGACAACACCGAT
GGCATCGGCGGCACCGGCGGTGGTGGCGGCGGCAGCGGCGGCAGAGGCAG
CAACACCACAGCAACGGCAACAGCCTCGCTGGCAGGGCTTTGCACCGGCG
TTGCCTTCAGGGGGCGGATCGGAGGAGACCGCGCGGTCCGCGCGAACATC
CCGTTTCCACTTCTTGGTACCATAGATGTCCGTCGGAACGGCGCAATTTT
CAGGCCTCGCGAGCGGGACTTCACCTCCGGTTGCGTCGTCATGGCGCGGC
GCAACCCATACCGCCCGCGTGTCCAGATGCGGTACCCCGACGAATTTCTC
GCGCGCGTTAAGGAGGAGGCACCGTTCGCCTTTCTCTGGCCTGGGCACGC
CGCTGCCAAGAGTAAAGACTTGGAGGCGACCTCGGCGGGAGACGGCGGCA
GCGGCGGCGGTAGCGGCGGCCGCCGCGGCTACGGCGGTGGTGGCGGCAGT
TCCAGCGGCGATGACGCGAACGGCGAGCTGCAGCACGAGCTCGAGGAAAT
CGAGCGGCTGCCGGGCTCAGGCCCCGCGCCATTCTTCCACGCTGGCTACA
CCGCCTACTTCGAGATCTCTCTCGGGGAAAAGTTGCCGCCGCTGCAGGAG
CCGCAGGACGACGACTTCCACTTCGACTCGGACTGTGTGGCGATCGGACT
GGCTAGGGACCGCTTCAAACTCGAATGCCCTGGAATGCTGCCGCGCGCCA
TCTCTGGAAGTCTGCCTTGCTGGAAGGTGTAGAGATCCAACGAGTTGAAG
CAGCTGGTCTCCCCACAACTGCTCGAGCTGGTGAGTTGTCGGAACGAGAG
CAGGAAGGGTGTATAAGAGAAGGATGTCGCACGCGCCTGGGCCCCCTCTT
CTCGCTTCGTGAAATCTCAGCCATGAACATGAAAGGAGCAATGCACACAT
GCTTTTGTGCCCAAGATGTCTTCGCCTTCCGATACCACCCGATGCCCCGC
TCTATCTGTGTAGCCGACCTTACGCCTCAGGACATCTGCCGCTGCATGGT
GGGTGCTTGGCCAACTTTCATCGACCGACATTGGGAACAAGACGAACTTA
TTCAAGCAATGGTTGATGGCGTTTTCGAGCCCCTCCGAATCGACGGCGCT
GGTTCGGCACCGGACAACACCGATGGCATCGGCGGCACCGGCGGTGGTGG
CGGCGGCAGCGGCGGCAGAGGCAGCAACACCACAGCAACGGCAACAGCCT
CGCTGGCAGGGCTTTGCACCGGCGTTGCCTTCAGGGGGCGGATCGGAGGA
GACCGCGCGGTCCGCGCGAACATCCCGTTTCCACTTCTTGGTACCATAGA
TGTCCGTCGGAACGGCGCAATTTTCAGGCCTCGCGAGCGGGACTTCACCT
CCGGTTGCGTCGTCATGGCGCGGCGCAACCCATACCGCCCGCGTGTCCAG
ATGCGGTACCCCGACGAATTTCTCGCGCGCGTTAAGGAGGAGGCACCGTT
CGCCTTTCTCTGGCCTGGGCACGCCGCTGCCAAGAGTAAAGACTTGGAGG
CGACCTCGGCGGGAGACGGCGGCAGCGGCGGCGGTAGCGGCGGCCGCCGC
GGCTACGGCGGTGGTGGCGGCAGTTCCAGCGGCGATGACGCGAACGGCGA
GCTGCAGCACGAGCTCGAGGAAATCGAGCGGCTGCCGGGCTCAGGCCCCG
CGCCATTCTTCCACGCTGGCTACACCGCCTACTTCGAGATCTCTCTCGGG
GAAAAGTTGCCGCCGCTGCAGGAGCCGCAGGACGACGACTTCCACTTCGA
CTCGGACTGTGTGGCGATCGGACTGGCTAGGGACCGCTTCAAACTCGAGG
GGAAGCAGCCGGGCTGGGACCGCCACAGCTGGGGGTTTCACTCGGACGAC
GGCTTCTATCACCACCGCTGCCAGGCTTCGTCGCACACCGACAGCCCGAC
GACATTCGGGCCCGGCGACACTGTAGGCTGTGGCCTGCTCTACCCACGGG
GGGAAGCAGCCGGGCTGGGACCGCCACAGCTGGGGGTTTCACTCGGACGA
CGGCTTCTATCACCACCGCTGCCAGGCTTCGTCGCACACCGACAGCCCGA
CGACATTCGGGCCCGGCGACACTGTAGGCTGTGGCCTGCTCTACCCACGG
GGATTGGCGCTCTACGACCGCCGTTTCCACCTCGGTCGACCCTGCCCGGA
GGGAACTGACTCCGTCGACTGCGATGGAGCGATTTTCTTCACCAAGAACG
GCCGTTTCCTTGGGATAGCGTTCAACGACGTTGATGTTCGCAAGGGATTG
GCGCTCTACGACCGCCGTTTCCACCTCGGTCGACCCTGCCCGGAGGGAAC
TGACTCCGTCGACTGCGATGGAGCGATTTTCTTCACCAAGAACGGCCGTT
TCCTTGGGATAGCGTTCAACGACGTTGATGTTCGCAAGAGACCGCTATAC
CCCGTCATCGGGCTCGACAGCCATTGTTGCGTCACCGCCAACTTCGGAGC
GAAAGCGTTCGCCTTCGACCTGCCTGCCTTCGAGACGATCTTCACCGGCG
CGTCGCCAAGCAGCTCCACAGCGGCCGAGAGACCGCTATACCCCGTCATC
GGGCTCGACAGCCATTGTTGCGTCACCGCCAACTTCGGAGCGAAAGCGTT
CGCCTTCGACCTGCCTGCCTTCGAGACGATCTTCACCGGCGCGTCGCCAA
GCAGCTCCACAGCGGCCGAGACGTCCATCCTCCGAAGGGTTTACTCGAGA
GGGAACGGGGTAGTCAACCCCCGGCTTCTGTGCCCGTACATACGACTCAC
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGACACGTCCATCCTCCGAAGGG
TTTACTCGAGAGGGAACGGGGTAGTCAACCCCCGGCTTCTGTGCCCGTAC
ATACGACTCACGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAC
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