mRNA_P-fluviatile_contig22.4763.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4763.1
Unique NamemRNA_P-fluviatile_contig22.4763.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: D7G6Y6_ECTSI (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y6_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 3.870e-153
Identity = 255/378 (67.46%), Postives = 282/378 (74.60%), Query Frame = 3
Query:   12 MLVCRGGRLLMALSSMGLVRSYVSPRLGNAQ--SVRIAQQRLYNRSRSTGDRSSNDVVG-RPNGGDTVEQNNNVDEWDNWEFGTWKTRTHAENTAEAEARAVGPLSLSKLIGKEALVDQETSDLDRAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANW----TLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSPSAVPIGEIDWSVPTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLSEDERRRVKLVWLMRCVRGSEHILRRQGIDVPQEIFGGDKKRPQNIAGYRVR 1124
            ML+ RG RLLMALS++GLVR Y+SPRLG     S R  QQRLY RSRSTGDRSSNDVV  + +GG  VEQ+++VDEWD WEFGTWKTRTH+EN AEA ARA GP  +S  IG  ALVDQ  SDL+RAVDLLKGYLSEDR+SRM+DVLD+RTRSATLVFENPANPNN   W    TL +  +Q     S     S     + M   +          S +  T     + H  P  A  K      QVVASDLSPSAVPI EIDWSVPTAVVLGNEERGISDSMR MADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDL EDERR V + WLM+CVRGSEHIL+R+GID+PQEIFG DK+RPQNIAGYRVR
Sbjct:    1 MLIWRGDRLLMALSTLGLVRCYLSPRLGGTYPCSSRSVQQRLYRRSRSTGDRSSNDVVSPKTSGGGAVEQDSHVDEWDTWEFGTWKTRTHSENVAEAAARAAGPAKVSTFIGTRALVDQTASDLERAVDLLKGYLSEDRLSRMEDVLDQRTRSATLVFENPANPNNV--WACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAM---------GSQKWLTL----HGHDRPEDAVAKLKTDGYQVVASDLSPSAVPISEIDWSVPTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERREVAVTWLMQCVRGSEHILKREGIDIPQEIFGTDKQRPQNIAGYRVR 363          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A0G4EX06_VITBC (SpoU_methylase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX06_VITBC)

HSP 1 Score: 145 bits (365), Expect = 2.600e-35
Identity = 92/252 (36.51%), Postives = 131/252 (51.98%), Query Frame = 3
Query:  369 DLDRAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANWTLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSPSAVPIGEIDWSVPTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLSEDERRRVKLVWLMRCVRGSEHILRRQGIDVPQEIFGGDKKRPQNIAGYRVR 1124
            D + AV+ L   +S DR+ R+Q V+ +RT     VFE P NPNN        ++  +   + IR      R R I           ++ A G ++      ++     +   K      +V ASDL   +  +  +D S P  +VLGNE  GIS+ MR +AD TF +PMRGF  SFN+SVAC++  A+LS +  LK GDLSE ER  V   WLMRCV GS+ +L R+G+ VP+ +    ++R     G R R
Sbjct:   87 DYESAVEALSPLVSPDRLERLQTVISQRTNHCQFVFEAPTNPNNVWACLRTLDSFGIQHTSVIRRPGGYDRQRDING--------NMNVALGSSQWLSMQEFQSASEAIGQLKDRGV--RVYASDLQEDSTALTSLDVSQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKWGDLSEGERAAVMTEWLMRCVPGSQQVLERKGLRVPERLRR-TRQRLLGCEGVRKR 327          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: W7UA00_9STRA (Trna rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA00_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.040e-31
Identity = 103/325 (31.69%), Postives = 158/325 (48.62%), Query Frame = 3
Query:  198 DTVEQNNNVDEWDNWEFGTWKTRTHAENTAEAEARAVGPLSLSKLIGKEALV--------------DQETSDLDRAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANWTLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSP--SAVPIGEIDWSVP-TAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLSEDERRRVKLVWLMRCVRGSEHILRRQGIDVPQEIFGGDKKRPQNIAGYRV 1121
            D  + ++N   +DNWEFG     +   N      +  G  S ++ +GKEA                D+   D+  A + L  + +  R+ R++D++++RT+S   VFEN ANPNN        +A  V  A  I       +  R+          Q   A G  +      +      +A+ KR      V+ASDL P  S  P+ E++W+    A+V+GNEERGI++ MR++ D TF IPM GF  SFN+S + ++ LA +S++  LKHGDL   E+  + L WL+R V     ILRR+G+ +  E F    K    + GY +
Sbjct:   84 DVPKPDSNDGNFDNWEFGVNAGWSGENNGRSLRIKQHGDGS-TQSVGKEAEEREGENHNMDHEEEDDRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRL---------AQAKSAMGSQKWLTVREHPSASACVAALKREGY--YVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERFLPTSKA---VLGYSL 393          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A4D9CY40_9STRA (SpoU_methylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY40_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.500e-29
Identity = 84/242 (34.71%), Postives = 127/242 (52.48%), Query Frame = 3
Query:  354 DQETSDLDRAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANWTLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSP--SAVPIGEIDWSVP-TAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLSEDERRRVKLVWLMRCVRGSEHILRRQGIDVPQE 1070
            D+   D+  A + L  + +  R+ R++D++++RT+S   VFEN ANPNN        +A  V  A  I       +  R+          Q   A G  +      +      +A+ KR      V+ASDL P  S  P+ E+ W+    A+V+GNEERGI++ MR++ D TF IPM GF  SFN+S + ++ LA +S++  LKHGDL   E+  + L WL+R V     ILRR+G+ +  E
Sbjct:    8 DRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRL---------AQAKSAMGSQKWLTVREHPSASACVAALKREGY--YVLASDLKPGTSPKPVQEVKWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDE 238          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A7S4VNE4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VNE4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 4.460e-27
Identity = 113/390 (28.97%), Postives = 185/390 (47.44%), Query Frame = 3
Query:   36 LLMALSSMGLVRSYVSPRLGNAQSVRIAQQRLYNRSRST-GDRSSNDVVGRPNGGDTVEQNNNVDEWDNWEFGT---WKTRTHAENTAEAEARAVGPLSLSKLIGKEALVDQET----------------SDLDRAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANW----TLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYRHYLPRLASWKRSRCPP--QVVASDLSPSAVPIGEIDWSV-PTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSA--------------VRALKHGDLSEDERRRVKLVWLMRCV---RGSEHILRRQGIDVPQEI 1073
            +L   SS+  + S+  PR    ++  +   RLYN SR T   R + +  G         ++ ++D W+ +EF     W TR  +E+       A  P   +K + +EA+ D+ET                S +  A  +L+ Y++ DR+ R+  VL +RT++   +FENP+NP+N   W    T+ +  VQ         L  G            +    +  A G  +       R+Y+    + +  R     ++ ASDL+P++  + ++DW V P  VV+GNE+RGIS+ MR +AD TF +PM GF  SFN+SVA ++ LAH+SA                 L+ GDL E E   ++L  L+  +   R    +L+++GI +P +I
Sbjct:    9 MLSRQSSLRTIASFCQPRQNAGKTAAMTSTRLYNVSRKTYRQRKAEEKNGT--------KSPSLD-WEKFEFSDNPKWDTR-FSEDIRNNNQNAT-PEEFAKFVKEEAIRDRETATEFNAQHNAYANLSPSMVVEASAILEPYINADRLERIDSVLKQRTKNCRFLFENPSNPSNV--WACLRTIDSFGVQNVDLVINSGLYEGKAA--------ISQKRGMRTAMGSAQWLS---LRNYMTTADAVREIREEKGYKIYASDLNPNSKDVRDLDWDVGPICVVMGNEDRGISEEMRNLADETFTLPMVGFAESFNLSVATAVTLAHMSASSRQKEVEGGETIVTGPLRPGDLDEHEFNCLRLKGLLNSLPQRRTGPALLKQKGIVLPDDI 374          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A7S2A9L6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L6_TRICV)

HSP 1 Score: 120 bits (300), Expect = 8.600e-26
Identity = 102/305 (33.44%), Postives = 156/305 (51.15%), Query Frame = 3
Query:  222 VDEWDNWEFGTWKTRTHAENTAEAEARAVGPLSLSKLIGKEALVDQETSDLDRAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANW----TLHAEAVQ----VNKAASIRHLLSGHRCRRIMYVYLCAP--AVQVHPASGRT-RTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSPSAVPIGEIDWSV-PTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR-----ALKHGDLSEDERRRVKLVWLMRCV---RGSEHILRRQGIDVPQEIF 1076
            +DEW         ++T AE   +AE R +  L+       EA    +   + RA D+L+ ++ +DR  R+  VL +RT+    +FENP+NP+N   W    T+ +  VQ    V  +   +  ++  + R +      A   +++ HP++    R  +   Y+ Y                 ASDL+P++  + E+DW V P  VV+GNEERGISD MR MAD TF +PM GF  SFN+SVA SI LAH+SA       AL+ GDL   E   ++L  L+  +   +    +L+++GI +P EIF
Sbjct:  139 LDEW---------SKTEAEED-KAERRRLDDLN-------EAYRALDPDVVSRATDILRPFVGDDRYERIDSVLRQRTKRTKFLFENPSNPSNV--WACLRTIDSFGVQNVDLVVDSGMYKGKMAVQQKRGMRTAMGSAKWLSLRNHPSTEEAVRAIKAEGYKIY-----------------ASDLNPNSQDVREVDWDVGPVCVVMGNEERGISDEMREMADVTFTLPMVGFAESFNLSVATSITLAHMSAKSKDGRGALRPGDLDPHELACLRLKGLLGSLPKRKLGPILLKQEGIVLP-EIF 406          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A7S2XPD6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPD6_9STRA)

HSP 1 Score: 114 bits (284), Expect = 7.830e-24
Identity = 88/267 (32.96%), Postives = 139/267 (52.06%), Query Frame = 3
Query:  342 EALVDQETSDLDRAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANW----TLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQ---VHPASGRTRTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSPSAVPIGEIDW--SVPTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRA-----------LKHGDLSEDERRRVKLVWLMRCV---RGSEHILRRQGIDVPQEI 1073
            +AL   +   ++RA ++L  +++EDRI R++ VL +RT+ +  +FENP NP+N   W    T+ +  +Q     ++  ++ G   R        A  VQ   +  A G  +      +      +AS K+     ++ ASDL+P++  + E+DW  + P  VV+GNE  GISD MR +AD TF +PM GF  SFN+SVA +I LAH+SA              L+ G++   E   ++L  L+  +   R    ILR +GID+P  I
Sbjct:  129 QALQSLDPELVERASEVLIRHINEDRIERVESVLKQRTKQSRFLFENPTNPSNV--WACLRTIDSFGIQ-----NVDVVMQGDNYRGK------AAIVQKKGMRTAMGSAQWLTLINHPDTASAVASIKQQGF--KIYASDLNPNSKDVRELDWVNAGPICVVMGNENNGISDEMRELADETFTLPMSGFAESFNLSVATAITLAHMSAKSGTSPDDKTKFGPLQPGNIDAHEYACLRLKGLLNSLPQKRMGRAILRNEGIDLPNAI 380          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A7S0Y847_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y847_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.630e-22
Identity = 79/251 (31.47%), Postives = 128/251 (51.00%), Query Frame = 3
Query:  378 RAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANWTLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSPSAVPIGEIDWSV---PTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR-------------ALKHGDLSEDERRRVKLVWLMRCV---RGSEHILRRQGIDVPQEI 1073
            +A++ L+ +++ DR+ R+  VL +RT+ +  +FENP+NP+N        ++  +     I  + SG    +            +  A   T T       H+  + A  +      ++ ASDL+P++  + +IDW     P  +V+GNE+RGIS  MR MAD TF +PM GF  SFN+SVA SI LAH+SA                L+ GDLSE E   + L  L+  +   R S+ +L++ G+++P  +
Sbjct:  138 KAIETLEPWINGDRLERVSGVLKQRTKHSKFLFENPSNPSNVWACLRTIDSFGMQNVDVI--IDSGRYAGKQAISQKKGMRTAMGSAQWLTLT------NHHTTKEAIDQIRDQGFKIYASDLNPNSKDVRDIDWDADDRPICIVMGNEDRGISQEMREMADETFTLPMSGFAESFNLSVATSITLAHMSAKSYNCQKDPDGKRKGPLRPGDLSEHEYNCLYLKGLLHSLPQKRMSKALLKKAGVELPDAL 380          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A448Z9V4_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9V4_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.130e-21
Identity = 79/254 (31.10%), Postives = 130/254 (51.18%), Query Frame = 3
Query:  378 RAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANWTLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYRHYLPRLASWK-RSRCPPQVVASDLSPSAVPIGEIDWSV---PTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVR---------------ALKHGDLSEDERRRVKLVWLMRCV---RGSEHILRRQGIDVPQEI 1073
            RA+D L+ ++++DR+ R+  VL +RT+ +  +FENP+NP+N        ++  +     +  + SG    +          V +  A   T T       H   + A  + R     ++ ASDL+P++  + +IDW     P  +V+GNE+RGISD MR +AD TF +PM GF  SFN+SVA SI LAH+SA                  L+ GDLSE E   + L  L+  +   + +  +L++  +++P+ +
Sbjct:  169 RAIDALEPWINDDRLKRVSGVLKQRTKHSKFLFENPSNPSNVWACLRTIDSFGLQNVDLV--IESGRYAGKQAVSQKKGMRVAMGSAQWLTLT------NHATTKEAIEQIRDVQGYKIYASDLNPNSKDVRDIDWDADDRPVCIVMGNEDRGISDEMRELADETFTLPMCGFAESFNLSVATSITLAHMSASSYHCNKEEESEKQRKGPLRPGDLSEHEYNCLYLKGLLNSLPKKKMATALLKQANVELPKAL 414          
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Match: A0A1E7EPN0_9STRA (SpoU_methylase-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPN0_9STRA)

HSP 1 Score: 102 bits (255), Expect = 4.750e-21
Identity = 81/248 (32.66%), Postives = 129/248 (52.02%), Query Frame = 3
Query:  378 RAVDLLKGYLSEDRISRMQDVLDERTRSATLVFENPANPNNSANW----TLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLCAPAVQVHPASGRTRTFQPPPYR--HYLPRLASWKRSRCPPQVVASDLSPSAVPIGEIDWSVPTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRA------LKHGDLSEDERRRVKLVWLMRCV---RGSEHILRRQGIDVPQEIF 1076
            +A  +L+ +++E R  R+  VL  RTR+   ++ENPANP+N   W    T+ +  +Q N    I   + G   + +M       A+    A   T T  P       ++  +  +K       + ASDL+P+++ I +     P  +V+GNE+RGISD MR +AD TF +PM GF  SFN+SVA SIILAH+S+         L+ GDL+E E   + L  L++ +   R    +L++  I +P ++ 
Sbjct:   10 KATSILEPWINEKRQQRITTVLKHRTRNVKFLYENPANPSNV--WACLRTIDSFGIQ-NVDLIIDSGMYGEGKQTLMQKRGMRTAMGS--AQWLTLTNYPSTKEAIQHIREVQGYK-------IYASDLNPNSIDIHQNQDQRPICIVMGNEDRGISDEMRLLADETFTLPMYGFAESFNLSVATSIILAHMSSKSVESSTGPLRPGDLNEHEYNCLYLKGLLKSLPKKRLGIALLKKNDIILPADLI 245          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y6_ECTSI3.870e-15367.46SpoU_methylase domain-containing protein n=2 Tax=E... [more]
A0A0G4EX06_VITBC2.600e-3536.51SpoU_methylase domain-containing protein n=2 Tax=V... [more]
W7UA00_9STRA2.040e-3131.69Trna rrna methyltransferase n=1 Tax=Nannochloropsi... [more]
A0A4D9CY40_9STRA1.500e-2934.71SpoU_methylase domain-containing protein n=2 Tax=M... [more]
A0A7S4VNE4_9STRA4.460e-2728.97Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2A9L6_TRICV8.600e-2633.44Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2XPD6_9STRA7.830e-2432.96Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0Y847_9STRA1.630e-2231.47Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A448Z9V4_9STRA1.130e-2131.10SpoU_methylase domain-containing protein n=1 Tax=P... [more]
A0A1E7EPN0_9STRA4.750e-2132.66SpoU_methylase-domain-containing protein n=1 Tax=F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:474014..478017 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score453.8
Seed ortholog evalue8e-125
Seed eggNOG ortholog2880.D7G6Y6
KEGG koko:K00556
EggNOG free text desc.rRNA methyltransferase
EggNOG OGsCOG0566@1,KOG0838@2759
EC2.1.1.34
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptiontRNA/rRNA methyltransferase, SpoU type
Ec32 orthologEc-01_011750.1
Exons4
Model size1677
Cds size1116
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4763.1prot_P-fluviatile_contig22.4763.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 474025..477467 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815966.3386106-UTR-P-fluviatile_contig22:474013..4740241622815966.3386106-UTR-P-fluviatile_contig22:474013..474024Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 474014..474024 +
1693563898.291371-UTR-P-fluviatile_contig22:474013..4740241693563898.291371-UTR-P-fluviatile_contig22:474013..474024Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 474014..474024 +
1622815966.4574618-UTR-P-fluviatile_contig22:477467..4780171622815966.4574618-UTR-P-fluviatile_contig22:477467..478017Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 477468..478017 +
1693563898.331314-UTR-P-fluviatile_contig22:477467..4780171693563898.331314-UTR-P-fluviatile_contig22:477467..478017Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 477468..478017 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815966.3505464-CDS-P-fluviatile_contig22:474024..4742731622815966.3505464-CDS-P-fluviatile_contig22:474024..474273Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 474025..474273 +
1693563898.3004272-CDS-P-fluviatile_contig22:474024..4742731693563898.3004272-CDS-P-fluviatile_contig22:474024..474273Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 474025..474273 +
1622815966.3626232-CDS-P-fluviatile_contig22:474579..4748191622815966.3626232-CDS-P-fluviatile_contig22:474579..474819Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 474580..474819 +
1693563898.307792-CDS-P-fluviatile_contig22:474579..4748191693563898.307792-CDS-P-fluviatile_contig22:474579..474819Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 474580..474819 +
1622815966.3748653-CDS-P-fluviatile_contig22:476292..4767381622815966.3748653-CDS-P-fluviatile_contig22:476292..476738Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 476293..476738 +
1693563898.3151333-CDS-P-fluviatile_contig22:476292..4767381693563898.3151333-CDS-P-fluviatile_contig22:476292..476738Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 476293..476738 +
1622815966.384949-CDS-P-fluviatile_contig22:477286..4774671622815966.384949-CDS-P-fluviatile_contig22:477286..477467Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 477287..477467 +
1693563898.3242962-CDS-P-fluviatile_contig22:477286..4774671693563898.3242962-CDS-P-fluviatile_contig22:477286..477467Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 477287..477467 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4763.1

>prot_P-fluviatile_contig22.4763.1 ID=prot_P-fluviatile_contig22.4763.1|Name=mRNA_P-fluviatile_contig22.4763.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=372bp
MLVCRGGRLLMALSSMGLVRSYVSPRLGNAQSVRIAQQRLYNRSRSTGDR
SSNDVVGRPNGGDTVEQNNNVDEWDNWEFGTWKTRTHAENTAEAEARAVG
PLSLSKLIGKEALVDQETSDLDRAVDLLKGYLSEDRISRMQDVLDERTRS
ATLVFENPANPNNSANWTLHAEAVQVNKAASIRHLLSGHRCRRIMYVYLC
APAVQVHPASGRTRTFQPPPYRHYLPRLASWKRSRCPPQVVASDLSPSAV
PIGEIDWSVPTAVVLGNEERGISDSMRTMADATFVIPMRGFVRSFNMSVA
CSIILAHLSAVRALKHGDLSEDERRRVKLVWLMRCVRGSEHILRRQGIDV
PQEIFGGDKKRPQNIAGYRVR*
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mRNA from alignment at P-fluviatile_contig22:474014..478017+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4763.1 ID=mRNA_P-fluviatile_contig22.4763.1|Name=mRNA_P-fluviatile_contig22.4763.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4004bp|location=Sequence derived from alignment at P-fluviatile_contig22:474014..478017+ (Porterinema fluviatile SAG_2381)
AGGAGCAAACGATGCTCGTCTGTAGAGGAGGTCGACTGCTGATGGCACTC TCTTCTATGGGCCTCGTTCGAAGCTATGTCTCTCCCAGGCTGGGCAATGC CCAAAGCGTGAGAATAGCACAGCAGAGGCTGTACAATCGCTCCCGGTCGA CAGGTGATCGCAGCAGCAACGACGTCGTCGGCAGGCCAAACGGGGGCGAT ACCGTCGAGCAAAACAACAACGTCGACGAATGGGATAATTGGGAGTTCGG GACTTGGAAGGTGGGCCATCTGCTTGTGCTGTTGCTTACTGTCTACGTGA TTTAAGTTGAGTTGTCGGCAGTCCACGCATGATGATATCGCGCGCGTTCG CGTTTGCCTCTGTCACGGTCTCGGGGGCGCCGCTGTGCTCTAGTGATGAC TCCGGTGTCCCCGTGACTTCCTATGAAGCGAGAGTTTATCATGCCTTACG AGGATCGGCGCGCTATTTCCTACCCCATGCCCATTTGATCCCGCGTTCAT GGGGGGGGGCGTCTTATATTCCGGCTGATTGCGCATGTTTCTTTCATCCC GCCTGATGCGTCTCAGACACGGACGCACGCCGAGAACACGGCGGAGGCTG AGGCTCGTGCGGTCGGGCCCCTCAGCCTATCGAAGTTGATAGGAAAAGAG GCGTTGGTCGACCAAGAGACTTCAGATCTCGACCGCGCGGTTGATCTCCT CAAGGGGTACCTTTCGGAGGACAGGATATCGAGGATGCAGGACGTGCTTG ACGAGCGCACGAGGAGCGCGACGCTTGTTTTCGAGAACCCTGCCAATCCG AACAACGTGAGAGATTATCCTATAAAATGAAAGCATCAACGTTGTTTCTG CTACCTGCTGTAACGTGCAAAAGTTGCTCAGTCTCTGCCGACAGTGCTTT CGGTGTAGACTCTCAAAAGCTCGGCTTACGCGTTCACGCGTTGCAGCCCA ACTTCGGAAATGTCGTTCCGAGCAACGATTCTGCGTCGCCACCGCCCCCG CGTTTGCCCCCAGTGTTTGACGTAGTTCTGCAAAACGTCACGCTGTGGTG CTGGTCCAATCTTTGCGCTAAGAAAAATGGGGTATGTGGTATCTGATACT TGAGCAGCCTCCGCTTCAAGCGTCCGCATATTTGGTTAATCAACAAAGTC GAGCATGGGGCTCCGTGACGAGAAGCTGCTTGCACTATTGGAGGCAAAAA TATTGACATGCCCGCTGACCGACTGGCACTTAGACTGGTCCTTCATAACC AGCATCTGATGGTAATCCAACATTACAGCTAACTTGCTAATTCTTTTTTA TTGTGTCTCAGCCATGTGGCAAAGTCTCGAACGAAAACACGACAAGTACA AATGGCGACGGCTCGCGAGGAGGTTCCAATCCGAGAGCTCTAAAGAGAGC CATTTTCGGCTGCAATCGATCGCGGGCGTAGTTTGTGACTGTGTCGAGGT CGCCTGAGACTTTGGTGGCAAGTCGCTGCTCATCGAAGGAATACCATCGG CGACTATGCAGGTAGTCTGGACAGCCGAAAACAAGAGGGGTTGCTAAAAA TCACGGGGGTGCCCATCATTGCGTTTGGTACGATTTCTTGTGCTCTTTCG ACGGTCCGCAATGTGTGTGCCGAAAGTTCAGGGCACAGGGGCCTTTGGTG ATGAAGTTCAGTATGGTGTGTTGGTAGCTTGCTCGTGTTCGCGTACCTAT TTTCTTGTGTTGCGTTCGAGGCACTCTGGACGACTCGACATTTCACGACG GACTTGCGATTGTCGCAACACCCTAAAGTTCAGCCTGACTCGCTCTAGCC CCTTCAACTTCGTCCACAAATTGGAATTGAAGCGTTGAAGCCATTCTATC GCCCTTTTTCAGCGACCGTGATATATACGACTGCACGTCGTTGTCATGCA CAACGCCCGGGCATGAAACACACGACCCGATTGAGTCGCTCGATTTTCCG TGTCGAATTTTCTCAATCTTCGATTGATTTCGACCGTGGCGCGTGGTGCA CGCAGGTTTGGGCGTGTCTACGAACATTGGACTCGTTCGGGATCCAACAC GCGCACGTCGTGTCGGACCCTGCCACCTATTCCAAGAAGGCCAGACTCAA AACCATGTGCACCGCCATGGGAAGCCAGAAGTGGCTCACCTTGCATGGGC ACGACGGTCCCGAGGACGCAGTGACTAAGCTCAAGGCAGACGGGTACCAG GTGAACAAAAATATCCATGGCTCACTTTTTGCGTTGCACGCTCTTTTTTT CCCCTTCATGGATGCTCGCATTATGCCAGTCTGCCAACTGGACGTTGCAT GCTGAGGCAGTCCAAGTAAACAAGGCCGCTTCTATTCGGCATCTCCTTTC GGGACACCGGTGCCGCCGCATCATGTACGTGTACTTGTGCGCTCCTGCTG TCCAAGTTCATCCTGCCTCTGGACGAACGCGAACGTTTCAACCGCCACCA TACCGCCATTACCTGCCGCGTTTGGCGTCCTGGAAACGATCTCGGTGTCC TCCCCAGGTGGTCGCAAGCGACCTTTCCCCGTCCGCTGTGCCCATCGGGG AGATAGACTGGTCCGTGCCGACGGCGGTAGTGCTGGGCAACGAGGAGCGG GGGATATCGGACTCGATGCGGACGATGGCCGACGCCACCTTCGTCATTCC GATGCGCGGGTTCGTGCGGTCCTTCAACATGTCAGTCGCCTGTTCCATCA TCCTGGCGCATCTCAGCGCCGTCAGGTGAAAGGCGGCAGCAGGATGAAGT AGTGTGATGCTCCTGCTGTACGCACCAGGAATTGCTGCGCCACACGTGCA CACTCACACCTACCTACACACACGCTACACTCGGCTTTCTCGGTGCTTGG TTTAAGTGGTCTCCGCAATAACCTTTCACGGTGAGTGTTGACGCAAAACC AGGGTCTGGTGCTTTCGTTCGCTCCACCACTATTCAACACTGAGAGTCTG AAGGGTTGGGCGGTTACCCCACACTGTCGTTGGCGGGTTATCGTGGTAGG CACCCGGTGTCGACTTGCCGTCATGGTGCGATGCACGAATGATTCCAGAT TCCCGCCGGAAGTTAAGCGGGAAAGTCATTTTATTTTGTTGCCATATTTC ATTCACACCATCCTGTTACCAGTGTACTGAGGTGTCACGGAAATCATCTC TTTCCTCCCCGCTGGATCCTGTGTACCCCTGACTGATATCGCGAATTCAT GCACGTACTCCAACGAAGCACTGACGGGTGAGATATTGCCCTTCATGTCA CGCCAACCTCTCTCCAACAATAGGGCTCTCAAGCACGGCGATCTCTCAGA AGACGAGCGGAGAAGAGTCAAATTGGTCTGGCTCATGCGGTGCGTCCGGG GCTCGGAGCACATCCTACGACGACAGGGTATCGACGTCCCTCAAGAAATT TTCGGGGGTGACAAGAAGAGGCCGCAGAACATCGCTGGCTACCGTGTGCG ATGAGAGTAAAGAAGCCCAAAATGTCCCATGTTGTGCTGCTGGATGGGTA GGATCCGGTGGCTCTAGTAAAGTGGCGAAGTTCTGAATGTTGCAGACGGA GTGTCTTCGATATGTTTTTTTGACTTACAAGAAGTAGCTTATCGTTGACA GCGTAGACTACCCAGGGCTCTATACTGTTTGCTACCTACGTCAGGCGGAG ATGTATCTACCTGGAGATTTTTTAAAGAAGTGGTTGACGTGGCACTCAAA GCCTGTGTGTGCATTTGAGATACCGTGCTTCTTGTGTGCTCCGGGGAAGA GCAGCGGTCGCGCGTGCCTTGATGTGTTTAGAGCAATCACACGACAGATT TTTATGGGACTCGAACGGGTTCAATACAGAAGGCTCGATCGCCGGATTAG AATGCTGAAATTTTGCCACGTTGCGCGCGACGAGGCTTCGTGTTCACCAG ACTCCAGGCACACGGCTAGGCATAACCCTGATTCAGAGTCTATCTTTCGT CCGTCGGCCCCTGAACTCACTGTGCGCCCGCACACGAGAGCCTCGCGCAG CGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig22:474014..478017+

>mRNA_P-fluviatile_contig22.4763.1 ID=mRNA_P-fluviatile_contig22.4763.1|Name=mRNA_P-fluviatile_contig22.4763.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2232bp|location=Sequence derived from alignment at P-fluviatile_contig22:474014..478017+ (Porterinema fluviatile SAG_2381)
ATGCTCGTCTGTAGAGGAGGTCGACTGCTGATGGCACTCTCTTCTATGGG
CCTCGTTCGAAGCTATGTCTCTCCCAGGCTGGGCAATGCCCAAAGCGTGA
GAATAGCACAGCAGAGGCTGTACAATCGCTCCCGGTCGACAGGTGATCGC
AGCAGCAACGACGTCGTCGGCAGGCCAAACGGGGGCGATACCGTCGAGCA
AAACAACAACGTCGACGAATGGGATAATTGGGAGTTCGGGACTTGGAAGA
TGCTCGTCTGTAGAGGAGGTCGACTGCTGATGGCACTCTCTTCTATGGGC
CTCGTTCGAAGCTATGTCTCTCCCAGGCTGGGCAATGCCCAAAGCGTGAG
AATAGCACAGCAGAGGCTGTACAATCGCTCCCGGTCGACAGGTGATCGCA
GCAGCAACGACGTCGTCGGCAGGCCAAACGGGGGCGATACCGTCGAGCAA
AACAACAACGTCGACGAATGGGATAATTGGGAGTTCGGGACTTGGAAGAC
ACGGACGCACGCCGAGAACACGGCGGAGGCTGAGGCTCGTGCGGTCGGGC
CCCTCAGCCTATCGAAGTTGATAGGAAAAGAGGCGTTGGTCGACCAAGAG
ACTTCAGATCTCGACCGCGCGGTTGATCTCCTCAAGGGGTACCTTTCGGA
GGACAGGATATCGAGGATGCAGGACGTGCTTGACGAGCGCACGAGGAGCG
CGACGCTTGTTTTCGAGAACCCTGCCAATCCGAACAACACACGGACGCAC
GCCGAGAACACGGCGGAGGCTGAGGCTCGTGCGGTCGGGCCCCTCAGCCT
ATCGAAGTTGATAGGAAAAGAGGCGTTGGTCGACCAAGAGACTTCAGATC
TCGACCGCGCGGTTGATCTCCTCAAGGGGTACCTTTCGGAGGACAGGATA
TCGAGGATGCAGGACGTGCTTGACGAGCGCACGAGGAGCGCGACGCTTGT
TTTCGAGAACCCTGCCAATCCGAACAACTCTGCCAACTGGACGTTGCATG
CTGAGGCAGTCCAAGTAAACAAGGCCGCTTCTATTCGGCATCTCCTTTCG
GGACACCGGTGCCGCCGCATCATGTACGTGTACTTGTGCGCTCCTGCTGT
CCAAGTTCATCCTGCCTCTGGACGAACGCGAACGTTTCAACCGCCACCAT
ACCGCCATTACCTGCCGCGTTTGGCGTCCTGGAAACGATCTCGGTGTCCT
CCCCAGGTGGTCGCAAGCGACCTTTCCCCGTCCGCTGTGCCCATCGGGGA
GATAGACTGGTCCGTGCCGACGGCGGTAGTGCTGGGCAACGAGGAGCGGG
GGATATCGGACTCGATGCGGACGATGGCCGACGCCACCTTCGTCATTCCG
ATGCGCGGGTTCGTGCGGTCCTTCAACATGTCAGTCGCCTGTTCCATCAT
CCTGGCGCATCTCAGCGCCGTCAGTCTGCCAACTGGACGTTGCATGCTGA
GGCAGTCCAAGTAAACAAGGCCGCTTCTATTCGGCATCTCCTTTCGGGAC
ACCGGTGCCGCCGCATCATGTACGTGTACTTGTGCGCTCCTGCTGTCCAA
GTTCATCCTGCCTCTGGACGAACGCGAACGTTTCAACCGCCACCATACCG
CCATTACCTGCCGCGTTTGGCGTCCTGGAAACGATCTCGGTGTCCTCCCC
AGGTGGTCGCAAGCGACCTTTCCCCGTCCGCTGTGCCCATCGGGGAGATA
GACTGGTCCGTGCCGACGGCGGTAGTGCTGGGCAACGAGGAGCGGGGGAT
ATCGGACTCGATGCGGACGATGGCCGACGCCACCTTCGTCATTCCGATGC
GCGGGTTCGTGCGGTCCTTCAACATGTCAGTCGCCTGTTCCATCATCCTG
GCGCATCTCAGCGCCGTCAGGGCTCTCAAGCACGGCGATCTCTCAGAAGA
CGAGCGGAGAAGAGTCAAATTGGTCTGGCTCATGCGGTGCGTCCGGGGCT
CGGAGCACATCCTACGACGACAGGGTATCGACGTCCCTCAAGAAATTTTC
GGGGGTGACAAGAAGAGGCCGCAGAACATCGCTGGCTACCGTGTGCGATG
AGGCTCTCAAGCACGGCGATCTCTCAGAAGACGAGCGGAGAAGAGTCAAA
TTGGTCTGGCTCATGCGGTGCGTCCGGGGCTCGGAGCACATCCTACGACG
ACAGGGTATCGACGTCCCTCAAGAAATTTTCGGGGGTGACAAGAAGAGGC
CGCAGAACATCGCTGGCTACCGTGTGCGATGA
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