mRNA_P-fluviatile_contig1.441.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI) HSP 1 Score: 1044 bits (2700), Expect = 0.000e+0 Identity = 580/743 (78.06%), Postives = 616/743 (82.91%), Query Frame = 3
Query: 1158 FRPPWRGGSRTAPPNEGKKEVPVGKEQCLDGKTFVVSGVLDSLRREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTLKTSIIDEDALFKMLKDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXTASKPPVVNPYAQXXXXXXXXASM---ANKKTTGGAAVANPYGATAAAAGGKAKS-AAKCTVGDAADISSSGSGGGG------VSQTPGQMWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEGWHLTSKGAKPPTGKDNPGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRKSSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILGG-SRTPLRDRYEMFFTDYSLLPLLVQQNYLGSLMNLDPKIRPLVTAAASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVGSIGGGSAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQALVVALQAPKKAKKRKAPPKSLAMEG 3353
FRP WRGG+R APPNEGKKEVPVGKEQCL GK FVVSGVLDSL REAAEDLIKQYGGKVTG+VSSRT++L+LG+VLDDGR PEEGSKYK+A +KT IIDED LFKML+DS P G + GXXXXXXXXXXX ASKP V NPY ASM A KK A NP+GA A AGGK K+ A K G + G V Q PGQMWVDKYKP SSS VIGHAGQVKKLKVWLQNWEGWHL KGAK PTGKDNPGARAALLSGVPGVGKSSTATLVARE+GYHVMELNASDTR+K SLSEELASVIGNKVLSF A+G GFRKQLVVMDEVDGMGGSDRGGIQELILLIKKS+VPII ICNDRQH KIRSL NHCYDLRF RPQK TI RVKAVAKMEGMDVD+NAAEMLVEANGNDIRQVLHALQMWSRKSSK+TYMNLK GIS IEKDK QRIGPFDAAR ILGG SRTPLRDRYE+FFTDYSLLPLLV QNYL SLM +D K+R VTAAASAAVSDADIISGKM GDVQHWELLPAQAALNVRVGS+GGGS GFPEFPKWLGNYSRENK RR+LGELSTHLN SVSGG EAVRLSY+HFLK +LTQPLR+EGA GAPACV LLEEYGLSRDDLFEV+PEF LS KGMK PPPD+F +DSK ++AVTRCYN+Q+HKSQAL VALQAPKKAKKRKAPPKS++MEG
Sbjct: 229 FRPAWRGGARLAPPNEGKKEVPVGKEQCLAGKAFVVSGVLDSLGREAAEDLIKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTRIIDEDGLFKMLRDSNP----KGQQPPGXXXXXXXXXXXAP----ASKPAVANPYQPKKAVVNPYASMQAAAKKK-----AAVNPFGA-AVIAGGKGKAPAGKSPAGTSXXXXXXXXXXXGARAAAAVRQNPGQMWVDKYKPTSSSGVIGHAGQVKKLKVWLQNWEGWHL--KGAKAPTGKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXX--GFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNLKGGISAIEKDKNQRIGPFDAARSILGGASRTPLRDRYELFFTDYSLLPLLVHQNYLSSLMQVDAKVRTEVTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSVGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVDLLEEYGLSRDDLFEVLPEFVLSGKGMKRPPPDLFGSLDSKTRSAVTRCYNSQAHKSQALAVALQAPKKAKKRKAPPKSVSMEG 953
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A1Z5JWY4_FISSO (Replication factor C subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWY4_FISSO) HSP 1 Score: 449 bits (1156), Expect = 8.010e-135 Identity = 303/756 (40.08%), Postives = 414/756 (54.76%), Query Frame = 3
Query: 1185 RTAPPNEGKKEVPVGKEQCLDGK----TFVVSGVLDSLRREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTLKTSII--DEDALFKMLKDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXTASKPPVVNPYAQXXXXXXXXASMANKKTTGGAAVANPYGATAAAA--GGKAKSAAKCTVGDAADISSSGSGGGGVSQTPGQMWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEGWHLTSKGAKPPTGKDNPGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRKSSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILGGSR-----TPLRDR------YEMFFTDYSLLPLLVQQNYLGSLM---------NLDPKIRPLVTAA-ASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVG-----SIGGGSAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQALVVALQAPKKAKKRKAPPKSLAME 3350
RT PP+ + QCL TF SGVL+ L R+AA+DL+K GG+VT +VSS+T+YL++G+VL+DGR ++GSKYKKA LK+ +I E+ + +L+ G + A TA+ VNPYA KK + NPY ATA A G KA A + ++ + + T +WVDKYKP S+ E++G+ VKKL WL +WE T++ + N +AALLSG PG+GK++TATLVA+E G V+E NASD R+K +L+ + G++ + F +K+ ++MDEVDGMG DR G+ ELI +IKKSKVPI+CICNDRQ K++SL +C DLR+ RP K I R V + EG++V++NAAE L E+ GNDIRQVL+ LQMWSRK + L + +LK + I KD I R+ FDAA+ +L G + TP ++R ++ FF DY LLVQQNYL L N ++ L + A+ A+SD D+ ++ G Q+W LLP ++L V+ G GG GFPEF WLG S + K R+L EL HLN S+SGG RLSYL L+T L Q L+ AD A A + ++EYGL RDD+FE + EF LS + F + SK K + TR YN +H SQALV K +KR + + AME
Sbjct: 175 RTTPPS-------LQHTQCLMRDNVPLTFCFSGVLEQLSRDAAQDLVKTLGGRVTTAVSSKTDYLVVGNVLEDGRDYQQGSKYKKAMELKSVVIVRGEELFYGLLQTYHDLCGPVVAPAVASTLVSAPPSVPSNPYSTATAATKVNPYA--------------KKAS------NPYAATAKANSYGRKAAPAMTSVTSNTTTMAVAPV----LGDTSSMLWVDKYKPTSAREILGNQDAVKKLTQWLNSWERIFNTTQNSNKTFSAPNGPWKAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDITGSQTIDFTTQA------------KKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQVLNCLQMWSRKGNSLKFKDLKERANDINKDDILRVSLFDAAKQLLEGRQGLNGSTPEQERDSFFRRHDAFFVDYGFTGLLVQQNYLKVLQGPFGEAKRKNAASQLEVLHRMSDAAEALSDYDLAENQLRGG-QNWSLLPLCSSLIVKTGFHASGPNGGFLPGFPEFTSWLGRNSTKGKKYRLLSELQHHLNYSISGGGSETRLSYLPVLRTRLLQLLQ---ADDAQAAIDFMDEYGLDRDDVFEKLDEFMLSSSKAAT-----FNDLSSKKKASFTRLYNQTAHSSQALVAEQGRMGKGRKRGSGDGAAAME 878
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: F0XZ23_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ23_AURAN) HSP 1 Score: 424 bits (1091), Expect = 1.640e-128 Identity = 238/504 (47.22%), Postives = 320/504 (63.49%), Query Frame = 3
Query: 1818 MWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEGWHL--TSKGAKPPTGKDNPGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRKSSKL---TYMNLKNGISTIEKDKIQRIGPFDAARMILGGSRTPLR-DRYEMFFTDYSLLPLLVQQNYL----------GSLMNLDPKIRPLVTAAASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVGSIGGGSAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQAL 3281
+W D++KPKS +++G+ KKL +WL +WE HL K KP K+NPGA+AALLSG PG+GKSS A L+ G+ V+ELNASDTR+ ++ E L +G +V+S + G +K +++V+MDE+DG+ GSDRGG Q L+ LIK S PIICICNDRQ K+++LANHC+DLRF RP K TI RV A+A EG+ +++NAAE+LVE+ GNDIRQ L+ALQMW+ + +Y +K+ +STI KD IQR+ PFD A++IL R DR + FFTDYSL+PLLVQ NY+ G ++D K+ L AA+A +SD D+I ++ D Q W LL +A+L VR G + GS P+F W G S K +R GEL+ HL + +SG +AVR YL L +T+PL D GA G +A L+EYGLS+DDLFE +P+ QL G K P D +D+K KT T+ YNA +H SQAL
Sbjct: 122 LWADRHKPKSQKDILGNGDVCKKLGLWLDDWEKVHLGDEKKRKKPAFAKENPGAKAALLSGPPGIGKSSMAALLCAARGFDVVELNASDTRSARTVEETLGDALGCQVVSSSFAKKGAAPPSKK--RLRRVVIMDEIDGLSGSDRGGSQALVKLIKSSSTPIICICNDRQSAKVKTLANHCFDLRFKRPMKVTIAKRVMAIAMKEGLTIEQNAAELLVESCGNDIRQCLNALQMWATSEGEAETCSYTAMKDRLSTISKDAIQRVTPFDGAKIILSDVRRKSHFDRCDAFFTDYSLVPLLVQHNYVTAASAARDAQGKPCSVDEKLNRL--EAAAACLSDVDLIDRRVHAD-QEWGLLTTEASLTVRAGVLVDGSCMAPQFSAWFGKNSTTKKSKRQCGELALHLGSRISGTRDAVRRDYLPMLAKYVTRPLVDGGAAGVAETIARLDEYGLSKDDLFETLPDLQLG--GAKVPGLDA---LDTKVKTHFTKTYNAGTHGSQAL 615
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA) HSP 1 Score: 422 bits (1085), Expect = 9.290e-128 Identity = 267/637 (41.92%), Postives = 342/637 (53.69%), Query Frame = 3
Query: 1797 VSQTPGQMWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEGWHLTS-KGAKPPTGKDNPG----ARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFR-KQLVVMDEVDGMGGSDRGG----------------IQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRKSSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILGGSRTPLRDRYEMFFTDYSLLPLLVQQNYLGSLMNLDPKIRPLVTAAASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVGSIGGGSAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGP--------------------EAVRLSYLH--------------------------------FLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKG-----------------------------MKSP-------------PP---------------DMFALIDSKAKTAVTRCYNAQSHKSQALVVALQAPKKAK 3314
VS PGQ+W DKY+P+ S+++GH G V+KL WL N+E + KGAK GK G RA L+SG PG+GK++ AT+VA+ LG+ V E NASDTR+K S+ E L V+ N VLSF G+K+G K++++MDEVDGMGG DRGG + ELI LI +KVPIICICNDRQ TKIRSL NHC D+RF RP K I R+K VA+ EG+D+D NAAEML E+ GNDIRQ LHA+QMWSR S + YM +K+G+ + KDK QR+ FD ARMI P +RYE FFTDY L+PLLVQQN+ ++ + A A+ A+SDA++ + GDV HWELLP AAL++RVG G GFP FP+WLG S K RR++ E++TH+N + P EAV L Y+ L V+T+PLR GADG +A+L+EYGLSRDDL E M + L KG + SP PP D + + AKTA+TR YN+ +H SQALV + APK+AK
Sbjct: 42 VSSEPGQLWADKYRPQKPSDLLGHTGDVRKLTEWLNNFEARAAPAVKGAK---GKGKAGDDMHKRAVLISGPPGIGKTTAATIVAKSLGFEVTEFNASDTRSKKSMEEGLKDVLSNTVLSF---------GSKAGSKPPKRVIIMDEVDGMGGGDRGGRNVAEADVQMRLLARSMGELIKLIAITKVPIICICNDRQDTKIRSLVNHCIDMRFKRPVKTMIAKRMKEVAQKEGLDIDLNAAEMLSESVGNDIRQCLHAMQMWSRGSRTMAYMEVKDGLGAVSKDKSQRVSAFDGARMIFQTKSIPQAERYEAFFTDYGLVPLLVQQNWPDAIAKSNKATMMQRMARAADAISDAELAGSMVRGDVNHWELLPLYAALHLRVGLECDGYIGFPGFPQWLGKNSAATKRRRLVAEINTHMNARQARTPSPDNDHLPLESLLSLVNAEREAVWLDYVSSSVLSVRLIVIQSEREKRVXXXXXXXXXXXVPVLTRVITEPLRSAGADGVGEAMAMLDEYGLSRDDLLESMADLTL--KGTRVFIVPIHTCAVRHALGVVHRQGANDFNLSSPIHAYLYMYIEVPKPPVPLAMRATLRRQGTRDYIGEVSTAAKTALTRAYNSTTHTSQALVDEISAPKRAK 664
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A7S3ZNL0_9STRA (Replication factor C subunit 1 n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNL0_9STRA) HSP 1 Score: 429 bits (1103), Expect = 1.040e-127 Identity = 281/712 (39.47%), Postives = 371/712 (52.11%), Query Frame = 3
Query: 1212 KEVPVGKEQCLDGKTFVVSGVL--DSLRREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTLKTSIIDEDALFKML--------KDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXTASKPPVVNPYAQXXXXXXXXASMANKKTTGGAAVANPYGATAAAAGGKAKSAAKCTVGDAADISSSGSGGGGVSQTPGQMWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEGWHL--TSKGAKPPTGKDNPGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMW--SRKSSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILGG-SRTPLRDRYEMFFTDYSLLPLLVQQNYLGSLMNLDPKIRPLVT-------AAASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVGSIGGGSAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQAL 3281
K+ P + L G TFV +GVL D + RE AED+IK+ GGK TG+VS RTNY++ G +L+DGR EEGSK++ A+ KT++I FK KD P + PP+ P A PG +W D++KPK + +++G+ KL WL WE HL K KP NP ARAALLSG PG+GKS+ A L+ + G+ V+E NASDTR+K S+ LA +G L G K G R++ V+MDEVDG+ SDRGG LI LIK + PIICICNDRQ K++SLANHCYDLR RP K+ + R+ AVA EG+ +++NAAE+LV++ GNDIRQ L+ALQMW S S K TY ++K IS I KD++QR FDAA+MIL R DR E FF DY+ +PL+VQQ+Y+ + MN +PL + A+ +SD D+I ++ D Q W LLP QA+ V VG+ GG P+F +W G S K+RR +LS L VS G EAVR YL L ++ PL A G + L+ YGLSRDDL E +P+ +L K P +FA +D+KAK+A TR YN+ H +Q L
Sbjct: 241 KKAPAEPQLALTGTTFVFTGVLAGDDVTRELAEDMIKERGGKCTGAVSGRTNYVVCGELLEDGRPVEEGSKFRAAEDKKTTLIRGARAFKQFLQDADAKFKDKAP--------------------------PVKALPPLERPKA----------------------------------------------------------------APG-LWADRHKPKQNKDMMGNGDIRSKLGKWLDQWERVHLGDPKKRIKPKHEPQNPSARAALLSGPPGIGKSTMAALLCEQRGFEVVEYNASDTRSKKSIEGGLADALGCGSLF----------GKKGGQRRRRCVIMDEVDGLSASDRGGSAALIKLIKTTATPIICICNDRQSPKVKSLANHCYDLRCKRPMKQIVAKRLVAVAAAEGLTLEQNAAELLVDSCGNDIRQCLNALQMWTQSNASGKATYGDMKGRISAISKDEMQRASTFDAAKMILSDHQRKSHIDRVEAFFHDYTAMPLMVQQSYIQAAMNAKEGGKPLSQLGKLERISEAAERLSDVDLIDRRIRQD-QDWSLLPLQASTTVGVGATVGGFCMNPQFSQWFGKNSTTQKNRRQCADLSYRLGHRVSAGREAVRRDYLGPLLRHVSAPLLGGDASGT---IERLDAYGLSRDDLMETLPDLELHDKDK----PKLFASLDAKAKSAFTRAYNSVGHSAQGL 843
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A7S3JSX2_9STRA (Replication factor C subunit 1 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSX2_9STRA) HSP 1 Score: 425 bits (1093), Expect = 1.710e-127 Identity = 295/763 (38.66%), Postives = 407/763 (53.34%), Query Frame = 3
Query: 1194 PPNEGKKEVPVGKEQCLDGKTFVVSGVLDSL-RREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTLKTSII-------DEDALFKMLKDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXTASKPPVVNPYAQXXXXXXXXASMANKKTTGGAAVANPYGATAAAAGGKAKSAAKCTVGDAADISSSGSGGGGVSQTPGQMWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEGWHL--TSKGAKPPTGKDNPGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRKSS--------------------------KLTYMNLKNGIST-IEKDKIQRIGPFDAARMILGG-SRTPLRDRYEMFFTDYSLLPLLVQQNYLG---SLMN--LDPKIRPLVTAAASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVGSIGGGSAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLR----DEGADGAPACVALLE---EYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQALVVALQAPKK--AKKRKA 3326
PP+ E CLDG +FV+SGVLD R E IK GG+V+GSVS +TN+L++G++L+DGR+ EEG K+K A K +II D + + SKP GS G T SK K VG + SSS SG G + + ++W D+YKPKS+ +V+G+ VKKL+ +L+NWE HL SK K K+NP A+AALLSG PG+GK++ A L+A+E GY V+ELNASD R+K SL+E+L + L F A + K+L++MDEVDG+ GSDRGG QELI LIK S+VPIICICNDRQ K++ LAN C+DLR RP K+TI R+ +A EG+D++ NAAE+L E GNDIRQ L+ALQMWS + S K TY+ +K+ + IEKD I R FD A+ IL R +R E FF DY L PLL+ +NY+ S+ N ++ K+ +V A+ S ++SD ++ K+ + Q+W LL QAA+ V+VG G P FP W G S K+ R+ EL+ HLN S + +RL YL L + ++QP + ++ D AC +++ EYG+SRDD F+ MP+ ++ SP P +D+KAKT T+ YN+++H SQAL APKK AK+++A
Sbjct: 102 PPSTTISNSSKNPELCLDGISFVLSGVLDEKPERSQVESYIKSLGGRVSGSVSGKTNFLVVGTLLEDGRSVEEGRKFKDAIERKVTIIRGWEKLVDTVEEMRKKRQSKPSEGSLGK-----------------LGLTKSK--------------------------------------------------KRKVGSSTAPSSSMSGSG-IERIENELWADRYKPKSTKDVLGNGEVVKKLRSFLENWEKVHLGPESKRKKLVPSKENPNAKAALLSGPPGIGKTTLAHLIAKEHGYDVLELNASDARSKKSLTEQLGGTLDCPTLKFGAINA-------KDMTTKRLLIMDEVDGLSGSDRGGSQELIRLIKISRVPIICICNDRQSNKVKGLANSCFDLRCKRPMKQTIAKRIVLIANKEGLDLEANAAELLAENCGNDIRQCLNALQMWSTELSTQGEESMLTHGVTEDNNDDNTSKQKRKATYLAMKSRLKGGIEKDSILRYTAFDGAKSILSDHERKSHNERIESFFIDYGLTPLLIHENYINASNSVKNCSIENKLERVVQASESLSISD--LVEAKIRNE-QNWGLLTTQAAMIVKVGVDIQGFCMNPNFPAWFGKNSTTTKNYRLTSELAFHLNHRCSASKQTIRLDYLEPLLSYISQPFQQLDANDDTDDNNACALVIDRMDEYGVSRDDFFDSMPDLLVT---KNSPIPK----LDTKAKTKFTKTYNSRNHSSQALHKDAPAPKKTSAKRKRA 779
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A812KXV0_9DINO (Replication factor C subunit 1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KXV0_9DINO) HSP 1 Score: 423 bits (1088), Expect = 7.240e-126 Identity = 270/722 (37.40%), Postives = 361/722 (50.00%), Query Frame = 3
Query: 1206 GKKEVPVGKEQCLDGKTFVVSGVLDSLRREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTLKTSIIDEDALFKMLKDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXTASKPPVVNPYAQXXXXXXXXASMANKKTTGGAAVANPY----GATAAAAGGKAKSAAKCTVGDAADISSSGSGGGGVSQTPGQMWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEGWHLTSKGAKPP---TGKDNPGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFR--KQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRK----SSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILGGSRTP-LRDRYEMFFTDYSLLPLLVQQNYLGSLMNL-----DPKIRPLVTAAASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVGSIGGGSAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEV-----------MPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQAL 3281
G+ VP K CL G V+GV L RE D+IK YGG VTGSVS +T+YLL G L+ G +KY+ AK + A L A A K G +A P GA A MWVD+YKP S +++G+ + +L WL++WE H+ KP NPGARA LLSG PG+GKS+ A LVAR +GY V E+NASDTR+K SL E LA V+GN+ ++F A GGG +Q+V+MDEVDGM DRGG ELI +IK ++ PIICICNDRQ + +RSLAN C DL+F RP K+ + R+ +A +G+ + NA E LVE +GNDIRQ +H LQMW+ +LT+ +K +T +KDK R+ FD + + R+ +RY FF DY L+PLLVQQ S+ K+ + AA + A+SD +M G W LL + AA+NV+ GS FP FP+W G S K RR+LGELS HLN VSGG +++R+ Y+ LK+ P+ ++GADG P +A+L+ YGLS+ DL E + EFQ KG+ + D FA + K+ +TR YNA +H+SQAL
Sbjct: 177 GRSTVPSAKRLCLQGVALAVTGVFPQLDREEVCDIIKTYGGTVTGSVSGKTHYLLTGDALESGDPVSASAKYRAAKERGVPTLTLPAFLDFL-----------------------------------------------------APRAVAKVGGSMPMARPAQRQRGAEEA------------------------------------MWVDRYKPASVEDLVGNKALIGRLVAWLKDWEAIHIKKTKPKPAFDARAGTNPGARAVLLSGPPGIGKSTAALLVARAVGYQVQEMNASDTRSKRSLKETLAEVVGNRAITFFARAPGGGXXXXXXXXXTARQVVIMDEVDGMSSGDRGGNAELIRIIKTTRRPIICICNDRQKSSVRSLANSCLDLKFSRPNKQQVAKRLALIAAEQGLAAEPNALEYLVETSGNDIRQTVHMLQMWANSPHGADGRLTFAAMKAAEATSQKDKSLRLNGFDVTKTLFSDVRSSTFTERYNSFFVDYDLIPLLVQQAMPQSVQTPRGEAPTSKLARMADAADAIALSDVMSNCVRMRG---QWSLLTSVAAMNVKAAYHASGSVAFPGFPEWFGKNSTMGKRRRLLGELSMHLNHRVSGGSQSLRMHYMETLKSAFYAPMLEKGADGVPDTIAMLDSYGLSKQDLTESCHAWPFFTLRWLQEFQF--KGITT---DWFARVPGAVKSKLTRAYNASTHRSQAL 801
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A7S4IHD5_9STRA (Replication factor C subunit 1 (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHD5_9STRA) HSP 1 Score: 423 bits (1087), Expect = 4.250e-123 Identity = 321/791 (40.58%), Postives = 411/791 (51.96%), Query Frame = 3
Query: 1236 QCLDGKTFVVSGVLD----SLRREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTL---KTSIIDED----ALFKML--------KDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXT-------------------ASKPPVVNPYAQXXXXXXXXASMANKKTTGGAAVANPYGATAAAAG--------------------GKAKSAAKCTVGDAADISSSGSGGGGVSQTPGQMWVDKYKPKSSSEVIGHAGQVKKLKVWLQNWEG-WHLTSKGAKPPTGKDNPGAR-AALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGG-GEGTKSGGF-------RKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRK-----------SSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILGGSR--TPLRDRY----------EMFFTDYSLLPLLVQQNY---LGSLMNLDPKIRPLV--------TAAASAAVSDADIISGKMMGDVQHWELLPAQAALNVRVGSIGGGSAG-----FPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTV-LTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQALV 3284
+CL G TFV +G+L + R+ AED +K GG+VT +VS +T+YL+ G L+DGR EEGSKY+KA L K I+ + AL KM+ K K G E G XXXXXXXXXXXX AS P NPYA+ X + G NPY A A GK AA G AD G G GG S P +W DKY P+++ +++G+ V KL WL WE +++ S G K N G + AALLSG PG+GK++TATLVARE G V+ELNASD R+K SL+E L V G++VL+F S GG G+G +K++++MDEVDGMG DR G+ ELI +IKKSKVPIICICNDRQ K+RSL HC DLR+ RP K I R V +MEGM V+ NAAE + E+ GND+RQVL+ LQMWS K ++ LTY LK+ I KD++ R+ FDA ++I+ G R TP DR + +FTDY L+ L V QNY + S K R A+ ++SD + + G +W LLP + L V G GG G FPEF WLG S K RR+L EL HLN +VS +RL+Y+ L++ L + EG + +++EYGL RDDLFE + EF L KG K FA +DSK K A TR YN SH+SQALV
Sbjct: 352 ECLSGLTFVFTGILSCPILAGSRDEAEDYVKTLGGRVTKAVSGKTDYLVCGYELEDGRGVEEGSKYRKANELGGDKVGIVRDSTEFYALVKMIDERRNPNKKVEKRGEGEEKKEEDGTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGMASPPARANPYAKKGGASPAXXXX-XRSGVGXXXXXNPYAAAGAXXXXXXXXXXXXXXXXXXXXXXXGKKPPAAANGAGSTADR---GGGSGGSSGDPNALWADKYAPRTTQDILGNRDAVTKLTNWLNRWESTFNVPSSGGKKSFSNPNGGPKKAALLSGPPGIGKTTTATLVARESGRDVLELNASDARSKKSLTENLGDVTGSQVLNFAPSAKGGKGKGGXXXXXXXXPPRKQKRVIIMDEVDGMGAGDRSGMSELIAMIKKSKVPIICICNDRQSQKVRSLVAHCLDLRYRRPVKTVIARRAVEVGRMEGMHVEPNAAEAIAESCGNDVRQVLNCLQMWSSKKRDGNSDAAAGNNDLTYKGLKDRRDAISKDEMLRVTMFDATKLIIEGRRGLTPDSDRKAQLDSLYKRSDAYFTDYGLMGLNVHQNYPKVMTSQFQATKKERDEEGELGVLERLGKAADSMSDFAVAEEAVRGGDGNWGLLPLCSILAVSTGYHAGGERGGFLPGFPEFAGWLGKNSSRGKKRRLLQELDRHLNFAVSADRTELRLNYVPALRSAFLDLMMNKEGGPRTREVIDMMDEYGLDRDDLFETLDEFTLDAKGKK------FADLDSKVKAAFTREYNKGSHRSQALV 1132
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A8C9TA05_SCLFO (Replication factor C subunit 1 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TA05_SCLFO) HSP 1 Score: 413 bits (1061), Expect = 1.010e-121 Identity = 275/711 (38.68%), Postives = 391/711 (54.99%), Query Frame = 3
Query: 1182 SRTAPPNEGKKEVPVGKEQCLDGKTFVVSGVLDSLRREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTLKTSIIDEDALFKMLKDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXTASKPPVVNPYAQXXXXXXXXASMANKKTTGGAAVANPYGATAAAAGGKAKSAAKCTVGDAADISSSGSGGGGVSQTPGQMWVDKYKPKSSSEVIGHAGQ---VKKLKVWLQNWEGWHLTSKGAKPPTGKDN-PGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFRKQLVVMDEVDGMGGS-DRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRKSSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILGG----SRTPLRDRYEMFFTDYSLLPLLVQQNYL-----GSLMNLDPKIRPLVTAAASAAVSDADIISGKMMGDVQHWELLPAQAAL-NVRVGSIGGG-SAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSH 3266
+R P G KE+P G E CL+G TFV++GVL+S+ RE A+ LI++YGGKVTG++S +T+YL+LG DG A SK +KA++L T IIDED L +++ +KP G ++ + P + P++ AGG + G + D S G GG +WVDKY+P+S VIG G+ KL WLQNW WH K GKD+ G +AALLSG PGVGK++TA LV +LGY +E+NAS TR+K+SL E +A + N + +G+ T S K +++MDEVDGM G+ DRGGIQE+I LIK++K+PIIC+CNDR H KIRSLAN+C+DLRF RP+ I + ++A EG+ + A ++ A+ DIRQVLH L MWS K +TY K S KD ++GPFD R + +R L D+ ++FF DY+L PL VQ+NYL + NL + L A S + D D++ ++ Q W LLP QA +V G + G + FP FP WLG +S KH R++ EL+TH++ ++ +AV L YL +L++ L +PL+ GA+GA V L++ Y L ++D+ +M ++S + P+ +A +D K K A TR YN +SH
Sbjct: 191 NREGPRALGSKEIPQGAENCLEGLTFVLTGVLESMEREDAKSLIERYGGKVTGNISRKTSYLVLGR---DGGA----SKTEKAESLGTKIIDEDGLLNLIR-TKP-----GKKSKYEIAAEAEVRSRQLRSAMSRMQPSMLPFSSSR------------------------------AGGN----QEVKKGLSFDKGSEGDGGS-------LLWVDKYRPRSLKGVIGQQGEQSCANKLLRWLQNWHRWHSRDKKFGKFAGKDDGSGFKAALLSGPPGVGKTTTAVLVCEDLGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGA---SQTVS---SKHVLIMDEVDGMAGNEDRGGIQEMIGLIKQTKIPIICMCNDRNHQKIRSLANYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPALNEIILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADASNARKDF--KLGPFDVCRKVFAAGEETARMSLIDKSDLFFHDYTLAPLFVQENYLHVRPAAAGGNLKSHLTLLSKTADS--ICDGDLVDRRIRSS-QTWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSTGKHSRIIQELATHMSLRLASSKQAVNLDYLPYLRSALLEPLQRFGAEGATQAVQLMDNYNLVKEDVDNIM---EISTWAGQ---PEPYAKLDPKVKAAFTRAYNKESH 830
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Match: A0A8C2GUB9_CYPCA (Replication factor C subunit 1 n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2GUB9_CYPCA) HSP 1 Score: 414 bits (1064), Expect = 1.280e-121 Identity = 280/731 (38.30%), Postives = 406/731 (55.54%), Query Frame = 3
Query: 1182 SRTAPPNEGKKEVPVGKEQCLDGKTFVVSGVLDSLRREAAEDLIKQYGGKVTGSVSSRTNYLLLGSVLDDGRAPEEGSKYKKAKTLKTSIIDEDALFKMLKDSKPDGGSTGSEAAGXXXXXXXXXXXXXXXXTASKPPVVNPYAQXXXXXXXXASMANKKTTGGAAVANPYGATAAAAGGKAKSAAKCTVG-DAADISSSGSGGGGVSQTPGQMWVDKYKPKSSSEVIGHAGQ---VKKLKVWLQNWEGWHLTSKGAKPPTGKDNPGARAALLSGVPGVGKSSTATLVARELGYHVMELNASDTRNKHSLSEELASVIGNKVLSFMASGSGGGEGTKSGGFRKQLVVMDEVDGMGGS-DRGGIQELILLIKKSKVPIICICNDRQHTKIRSLANHCYDLRFPRPQKRTIVTRVKAVAKMEGMDVDENAAEMLVEANGNDIRQVLHALQMWSRKSSKLTYMNLKNGISTIEKDKIQRIGPFDAARMILG-GSRTP---LRDRYEMFFTDYSLLPLLVQQNYL--------GSLMNLDPKIRPLVTAAASAAVSDADIISGKMMGDVQHWELLPAQAAL-NVRVGSIGGG-SAGFPEFPKWLGNYSRENKHRRMLGELSTHLNTSVSGGPEAVRLSYLHFLKTVLTQPLRDEGADGAPACVALLEEYGLSRDDLFEVMPEFQLSPKGMKSPPPDMFALIDSKAKTAVTRCYNAQSHKSQALVVALQAPKKAKK 3317
+R P G KE+P G E CL+G FV++GVL+S+ R+ A+ LI++YGGKVTG+VS +T YL+LG D G SK +KA++ T II+ED L +++ +KP G + E A T P +P + A+K T GA+ +S K ++ D + +S S S+ +WVDKY+P+S +IG G KL WLQNW H +K K + D G +AALLSG PGVGK++TA LV ELGY +E+NAS TR+K+SL E +A + N + SG+ T S K +++MDEVDGM G+ DRGGIQE+I LIK+SK+PIIC+CNDR H KIRSLAN+CYDLRF RP+ I V ++A EG+ + A ++ A+ DIRQVLH L MWS K +TY K + +KD ++GPFD R + G T L D+ ++FF DYSL PL VQ+NYL G+L N ++ + + ++ D D++ K + Q W LLP QA +V G + G + FP FP WLG +S KH R++ EL++H++ EA+ L YL + ++ + +PL+ +G++GA V L+++Y + ++D+ +M ++S G + PD ++ +DSK K A TR YN +SH + +LQ KK++K
Sbjct: 216 NREGPRALGSKEIPQGAENCLEGCVFVLTGVLESMERDEAKSLIERYGGKVTGNVSRKTTYLVLGR--DSG-----ASKTEKAESFGTKIINEDELLDLIR-TKP-GKKSKYEIAAEAEVQQGKPTPPSKKATPQGP---SPNKRSPSKGKSKPGSASKSGTLGAS----------------RSEVKKSLSFDQSKRASPVSHSTPESEGSSLLWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQNWHKHHSAAKFGKVGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYSGA---SQTVS---SKHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAVMSIAFKEGLKIPPPALNEVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADANNAKKD--MKLGPFDVCRKVFASGEETAHMSLIDKSDLFFHDYSLAPLFVQENYLHVRPAAAGGNLKN-----HLVLLSKTADSICDGDLVD-KQIRSRQAWSLLPTQAIYASVLPGELMRGYMSQFPTFPSWLGKFSSAGKHSRIIQELASHMSLKTLSSKEAINLDYLPYFRSAILEPLQSQGSEGASQSVKLMDDYDIIKEDVDNIM---EISMWGGQ---PDPYSKLDSKVKAAFTRAYNKESH---LMPYSLQVVKKSRK 895 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.441.1 >prot_P-fluviatile_contig1.441.1 ID=prot_P-fluviatile_contig1.441.1|Name=mRNA_P-fluviatile_contig1.441.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=682bp MLKDSKPDGGSTGSEAAGAAPGGGSGAAASAPATTASKPPVVNPYAQKKPback to top mRNA from alignment at P-fluviatile_contig1:4953818..4970692+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.441.1 ID=mRNA_P-fluviatile_contig1.441.1|Name=mRNA_P-fluviatile_contig1.441.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=16875bp|location=Sequence derived from alignment at P-fluviatile_contig1:4953818..4970692+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4953818..4970692+ >mRNA_P-fluviatile_contig1.441.1 ID=mRNA_P-fluviatile_contig1.441.1|Name=mRNA_P-fluviatile_contig1.441.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4092bp|location=Sequence derived from alignment at P-fluviatile_contig1:4953818..4970692+ (Porterinema fluviatile SAG_2381)back to top |