mRNA_P-fluviatile_contig22.4792.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig22.4792.1 vs. uniprot
Match: A0A6H5JAL8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAL8_9PHAE) HSP 1 Score: 488 bits (1257), Expect = 4.150e-145 Identity = 756/1063 (71.12%), Postives = 820/1063 (77.14%), Query Frame = 1
Query: 1096 PTQLVSVWKLFVGEGRLVEDIKAGEVRRVARALGALGDWKGVVRLLQSHRTEGGGPLPALDKLG---------YNWLASAHARLGDGESVLNTIEEMERNGHAADAEIYSLVFKAFTKSRGRHWGAALDVFRAMQSSRSSAT------------GVEAGESEERLASATVPSEFLAAEIWCRTLTTLAQGSDSRVALSAALSLMEEADAAGVEVDAATVDALLEALGKAKGRDERLLSLFELAETRGLSLKRQSYTWAVVAYKRCGKAQEALDAAETFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIGACAKATADGKADNKATGRKAVALLEEMKAAGLKPHPPAHQAAVVAVAAAEGHEAALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISAIDAMARAALTSKGKAEGPDVVCFNYAMAACAKAGKCELANRILSRVEACGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDASLKXXXXXXXXXXXXXXXXXXWALTLWLLSEIKGAGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMDEMKRHMPCDETTFSAVVHGCAQTRDWRAAERLLREMRDAGVRPNDACYYALLAAASKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEVAEILLEMLESQGVEPDAAIRAAAIVAFGRGGRADRARALMDDMRENGPPPNLPCFNGAIEACALAEDIEGGLSLMAEMG 4221
PTQ+V VW+LFVG+GR+V D+ A EV RVARA+GALGDW+G++ LL + T GGGPLP LD+L YNWL SAHA+LGD ++VL TI M RNGH ADA+ YSL FKAF KS GRHWG ALDVFR MQSS T GV E E ASA V SEFL+ ++WC+T+TT+AQGS R LSAALSLMEEA AGVEVDAAT DA+L ALGKAKG+DE+LL+LF AE RGL LKRQSY WAVVAYKRCGKA+EALD+A +F TAIGACAKAT + KA+ R PAHQAA+ A+AA+EGH AA++ I+ ID M RA++T K GPDVVCFNYAM+ACAKAG+CELA+R++SR++ACGLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGD +L XXXXXXXXXXXXXXXXXXWALTLWL SEIK AGL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + MPCDETTFSA++HGCAQTRDW AA RLL EM AG++PNDACYY LL AA +AG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAE+AEILLEM+ SQGVE D R+ A+VAFGRGGR D+A ALMD++RENG PPNL CFNGAIEACALA+DI+GG+SL+AEMG
Sbjct: 212 PTQVVGVWELFVGKGRVVTDVAAAEVSRVARAMGALGDWQGIIGLLGTRSTAGGGPLPDLDRLRAMVHPAFAIYNWLVSAHAQLGDAKAVLTTIGNMGRNGHPADADTYSLAFKAFVKSGGRHWGGALDVFRTMQSSSGVTTPRGGDGSVMEVEGVGVAEVE---ASAGVSSEFLSTDVWCKTITTVAQGSPPRKTLSAALSLMEEAQQAGVEVDAATTDAILTALGKAKGKDEQLLALFRQAEERGLRLKRQSYAWAVVAYKRCGKAKEALDSALSFSERGIVMTVVGWNAAMHAASVTGEPGKALELLEEAKSKGVKPTEVTYATAIGACAKATTNVKAN----ARXXXXXXXXXXXXXXXXXXPAHQAALTALAASEGHRAAMDLLAKMRANGTRLTSASYSPVLKSAAQVGDWRNAIALIDVMTRASVTDKDA--GPDVVCFNYAMSACAKAGECELAHRVMSRIQACGLAANLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLKADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMCKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALALMDNIRENGSPPNLQCFNGAIEACALADDIDGGMSLLAEMG 1265 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig22.4792.1 >prot_P-fluviatile_contig22.4792.1 ID=prot_P-fluviatile_contig22.4792.1|Name=mRNA_P-fluviatile_contig22.4792.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1378bp MQDTARAQRQHLRARHCRGGIKIKPSTLILSLVLLADEPETALGWLHTARback to top mRNA from alignment at P-fluviatile_contig22:712781..731438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig22.4792.1 ID=mRNA_P-fluviatile_contig22.4792.1|Name=mRNA_P-fluviatile_contig22.4792.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=18658bp|location=Sequence derived from alignment at P-fluviatile_contig22:712781..731438+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig22:712781..731438+ >mRNA_P-fluviatile_contig22.4792.1 ID=mRNA_P-fluviatile_contig22.4792.1|Name=mRNA_P-fluviatile_contig22.4792.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8268bp|location=Sequence derived from alignment at P-fluviatile_contig22:712781..731438+ (Porterinema fluviatile SAG_2381)back to top |