mRNA_P-fluviatile_contig21.4657.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig21.4657.1
Unique NamemRNA_P-fluviatile_contig21.4657.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: A0A6H5KXT3_9PHAE (CAP-Gly domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXT3_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 9.670e-92
Identity = 195/353 (55.24%), Postives = 245/353 (69.41%), Query Frame = 2
Query:  230 PRQARAQTAASGGKDGHGDRPASPAVGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESIAAIK--AEDFCPPTPPSPLHTHMLTSVRPHLPPSCLCKPQLPRKESHNSLGSENFGTSFLPTSTAHGAGSDAGGARKMPNRTRRSVYGNDDQIIGRILASEAFARILSATVADRVREEVAKREAQAKVETEAILNRMCELEQMVDDAGGAMDDIASMVQTISESIGGASNGLSPDRRDAATGSGXXXXXXXXXXXGRDDARVAELTELLCALHDTCSQAAETFLQPKWKQNSATVQHLTQRVKELGGKHRAGATPPPPPMEG 1282
            PR A+ QTA  GGKDG       PAVGRRVR +PKG  G+VRWVGPTHF+AG+W+GVELD+C+G+NDGEVQG+RYF+C AGHGVFVRP++++  K  A    PP   S          RP+         QL R+ SH SL SEN G S LP++T    GS++G ARK  ++ +R+  G DD +IG+ILASEAF RILS TVA+RV+ E+A++E Q K ++EA+L+RM  +E++V+DAGGAMDDIASMVQTISESI G    L  D + AA G      XXXXXXXGRDDARVAELT+LLC +HD  SQAAE  L+ + KQN   V+ LT+R++EL  + R  A  P P MEG
Sbjct:   12 PRHAKGQTA--GGKDGG----EFPAVGRRVRTLPKGLLGVVRWVGPTHFSAGVWVGVELDTCDGRNDGEVQGTRYFTCSAGHGVFVRPDNVSPTKEGASTAAPPASASSADRR-----RPNPGGLEFAPTQLTRRGSHASLLSENVGGSGLPSNT-WAPGSESGNARKALDKGKRTGSG-DDPMIGQILASEAFFRILSDTVAERVKTEMARKEFQMKADSEAMLSRMSHVERVVEDAGGAMDDIASMVQTISESIEGRPADL--DFKGAAAGG---VGXXXXXXXGRDDARVAELTKLLCTVHDMSSQAAE-LLRAERKQNQDQVKRLTERLQELETRGRVSAASPKP-MEG 344          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: A0A1S1VHU0_9PEZI (CAP-gly domain-containing protein n=1 Tax=Colletotrichum incanum TaxID=1573173 RepID=A0A1S1VHU0_9PEZI)

HSP 1 Score: 92.8 bits (229), Expect = 1.770e-17
Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 2
Query:  302 AVGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESI 502
            AVG+ VRL P G  GIVR+VG THFA+G W+GVEL+   GKNDG VQG RYF C  GHG+FVRP ++
Sbjct:    5 AVGQTVRL-PDGRTGIVRFVGNTHFASGDWVGVELEDDSGKNDGSVQGERYFDCSMGHGMFVRPTTL 70          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: UPI0019025C9F (dynactin n=1 Tax=Colletotrichum karsti TaxID=1095194 RepID=UPI0019025C9F)

HSP 1 Score: 90.1 bits (222), Expect = 1.930e-17
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 2
Query:  305 VGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESIAAI 511
            VG+ VRL   G  G+VR+VG THFA+G W+G+EL+   GKNDG VQG RYF C  GHG+FVRP ++A I
Sbjct:    6 VGQTVRLS-DGRTGVVRFVGSTHFASGDWVGIELEDDSGKNDGSVQGERYFDCGMGHGMFVRPTTLAII 73          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: A0A401RE72_CHIPU (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401RE72_CHIPU)

HSP 1 Score: 88.6 bits (218), Expect = 2.220e-17
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 2
Query:  305 VGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESIAAIK--AEDFCPPTPPSP 550
            VG RV +I KG  G V +VG T FA+G W+GV LD  +GKNDG VQG RYF+C+  HG+FVR   I  ++  A+   P TP  P
Sbjct:   23 VGSRVEVIGKGHRGTVAYVGATMFASGKWVGVILDDAKGKNDGTVQGKRYFTCEENHGIFVRQSQIQVVEDSADTTSPETPQEP 106          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: H1VIJ4_COLHI (Dynactin n=1 Tax=Colletotrichum higginsianum (strain IMI 349063) TaxID=759273 RepID=H1VIJ4_COLHI)

HSP 1 Score: 94.0 bits (232), Expect = 2.890e-17
Identity = 45/80 (56.25%), Postives = 53/80 (66.25%), Query Frame = 2
Query:  302 AVGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESIAAIKAEDFCPPTP 541
            AVG+ VRL P G  GIVR+VG THFA+G W+GVEL+   GKNDG VQG RYF C  GHG+FVRP ++          P P
Sbjct:    5 AVGQTVRL-PDGRTGIVRFVGNTHFASGDWVGVELEDDSGKNDGSVQGERYFDCSMGHGMFVRPTTLVVTAQAPAAAPKP 83          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: A0A812KX20_9DINO (Dctn1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812KX20_9DINO)

HSP 1 Score: 89.7 bits (221), Expect = 3.070e-17
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 2
Query:  290 PASPAVGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESI 502
            P S  VG RV  + + T G V++VG T FAAG WIGVELD+ +GKNDG +QG RYF CKAGHG+F RP ++
Sbjct:   29 PDSLKVGARVEALGQFT-GTVKFVGTTQFAAGPWIGVELDTPDGKNDGTIQGERYFDCKAGHGIFARPAAV 98          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: A1C722_ASPCL (Dynactin, putative n=1 Tax=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) TaxID=344612 RepID=A1C722_ASPCL)

HSP 1 Score: 96.7 bits (239), Expect = 7.470e-17
Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 2
Query:  302 AVGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESIAAIKAEDFCPPTPPSPLHTHMLTSVR 580
            +VG  V L   G P  VR+VG THFAAG WIGVELD C GKNDG VQG RYF C+ G G+F+RP ++AAI  +      PPS  +T+   + R
Sbjct:    5 SVGHVVTLT-DGRPATVRFVGTTHFAAGDWIGVELDDCTGKNDGAVQGERYFECEPGFGMFIRPSAVAAIIEQPVRETKPPSKGNTNAAQASR 96          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: UPI001CB7CC4B (dynactin subunit 1-like isoform X1 n=2 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB7CC4B)

HSP 1 Score: 88.6 bits (218), Expect = 7.760e-17
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 2
Query:  305 VGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESIAAIK--AEDFCPPTPPSP 550
            VG RV +I KG  G V +VG T FA+G W+GV LD  +GKNDG VQG RYF+C+  HG+FVR   I  ++  A+   P TP  P
Sbjct:   24 VGSRVEVIGKGHRGTVAYVGATMFASGKWVGVILDDAKGKNDGTVQGKRYFTCEENHGIFVRQSQIQVVEDSADTTSPETPQEP 107          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: A0A813BQS5_9DINO (DCTN1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813BQS5_9DINO)

HSP 1 Score: 90.5 bits (223), Expect = 8.210e-17
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 2
Query:  290 PASPAVGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESIAAI 511
            P S  VG RV  + + T G V++VG T FAAG WIGVELD+ +GKNDG +QG RYF CKAGHG+F RP ++ ++
Sbjct:   14 PDSLKVGARVEALGQFT-GTVKFVGTTQFAAGPWIGVELDTPDGKNDGTIQGERYFDCKAGHGIFARPAAVRSL 86          
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Match: A0A1E1WBN2_PECGO (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1WBN2_PECGO)

HSP 1 Score: 87.8 bits (216), Expect = 1.050e-16
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2
Query:  305 VGRRVRLIPKGTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVFVRPESI 502
            VG  V+L    + G+V +VGPTHFA G W+GVELD+  GKNDG V G RYF C+  HG+FVRP+ +
Sbjct:   33 VGESVQLRLSSSTGVVAYVGPTHFAGGAWVGVELDAPTGKNDGSVGGKRYFECRPRHGIFVRPDKL 98          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig21.4657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXT3_9PHAE9.670e-9255.24CAP-Gly domain-containing protein n=2 Tax=Ectocarp... [more]
A0A1S1VHU0_9PEZI1.770e-1764.18CAP-gly domain-containing protein n=1 Tax=Colletot... [more]
UPI0019025C9F1.930e-1759.42dynactin n=1 Tax=Colletotrichum karsti TaxID=10951... [more]
A0A401RE72_CHIPU2.220e-1751.19CAP-Gly domain-containing protein (Fragment) n=1 T... [more]
H1VIJ4_COLHI2.890e-1756.25Dynactin n=1 Tax=Colletotrichum higginsianum (stra... [more]
A0A812KX20_9DINO3.070e-1759.15Dctn1 protein n=1 Tax=Symbiodinium sp. CCMP2456 Ta... [more]
A1C722_ASPCL7.470e-1752.69Dynactin, putative n=1 Tax=Aspergillus clavatus (s... [more]
UPI001CB7CC4B7.760e-1751.19dynactin subunit 1-like isoform X1 n=2 Tax=Chilosc... [more]
A0A813BQS5_9DINO8.210e-1756.76DCTN1 protein n=1 Tax=Symbiodinium necroappetens T... [more]
A0A1E1WBN2_PECGO1.050e-1656.06CAP-Gly domain-containing protein (Fragment) n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig21contigP-fluviatile_contig21:2089518..2099960 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.9
Seed ortholog evalue3.2e-78
Seed eggNOG ortholog2880.D8LJ19
Preferred nameDCTN1
KEGG koko:K04648
KEGG Pathwayko04962,ko05016,map04962,map05016
GOsGO:0000003,GO:0000022,GO:0000070,GO:0000086,GO:0000132,GO:0000226,GO:0000235,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000819,GO:0000902,GO:0000904,GO:0000922,GO:0001505,GO:0001654,GO:0001709,GO:0001738,GO:0001745,GO:0001751,GO:0001754,GO:0002009,GO:0002252,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003006,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005818,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005868,GO:0005869,GO:0005874,GO:0005875,GO:0005876,GO:0005881,GO:0005929,GO:0005938,GO:0006403,GO:0006582,GO:0006725,GO:0006810,GO:0006836,GO:0006886,GO:0006888,GO:0006928,GO:0006950,GO:0006952,GO:0006955,GO:0006986,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007097,GO:0007098,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007338,GO:0007346,GO:0007349,GO:0007399,GO:0007409,GO:0007417,GO:0007423,GO:0007528,GO:0007610,GO:0008017,GO:0008088,GO:0008090,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0009566,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0010256,GO:0010389,GO:0010457,GO:0010564,GO:0010638,GO:0010769,GO:0010968,GO:0010970,GO:0010975,GO:0012505,GO:0015031,GO:0015629,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016330,GO:0016482,GO:0018958,GO:0019725,GO:0019748,GO:0019882,GO:0019884,GO:0019886,GO:0019896,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021510,GO:0021517,GO:0022008,GO:0022402,GO:0022406,GO:0022411,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0023061,GO:0030010,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030286,GO:0030397,GO:0030424,GO:0030496,GO:0030705,GO:0030855,GO:0030859,GO:0030968,GO:0031023,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031122,GO:0031175,GO:0031252,GO:0031334,GO:0031344,GO:0031616,GO:0031967,GO:0031975,GO:0032252,GO:0032253,GO:0032271,GO:0032273,GO:0032386,GO:0032388,GO:0032400,GO:0032401,GO:0032402,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032880,GO:0032886,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033157,GO:0033267,GO:0033365,GO:0033554,GO:0034453,GO:0034454,GO:0034501,GO:0034502,GO:0034613,GO:0034620,GO:0034643,GO:0034976,GO:0035006,GO:0035010,GO:0035011,GO:0035046,GO:0035047,GO:0035088,GO:0035089,GO:0035371,GO:0035966,GO:0035967,GO:0036477,GO:0036498,GO:0040001,GO:0040007,GO:0042051,GO:0042052,GO:0042147,GO:0042221,GO:0042440,GO:0042461,GO:0042462,GO:0042592,GO:0042802,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043195,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043473,GO:0043679,GO:0043933,GO:0043954,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044456,GO:0044463,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0044877,GO:0045087,GO:0045111,GO:0045165,GO:0045184,GO:0045197,GO:0045198,GO:0045202,GO:0045505,GO:0045595,GO:0045664,GO:0046530,GO:0046903,GO:0046907,GO:0047496,GO:0047497,GO:0048002,GO:0048193,GO:0048285,GO:0048468,GO:0048489,GO:0048491,GO:0048513,GO:0048518,GO:0048522,GO:0048588,GO:0048589,GO:0048592,GO:0048646,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048729,GO:0048731,GO:0048749,GO:0048812,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050773,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050877,GO:0050896,GO:0050905,GO:0051028,GO:0051049,GO:0051050,GO:0051081,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051225,GO:0051231,GO:0051233,GO:0051234,GO:0051236,GO:0051239,GO:0051255,GO:0051256,GO:0051276,GO:0051293,GO:0051294,GO:0051299,GO:0051383,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051642,GO:0051646,GO:0051647,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051654,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0051960,GO:0060236,GO:0060249,GO:0060271,GO:0060284,GO:0060341,GO:0060429,GO:0060560,GO:0061024,GO:0061162,GO:0061174,GO:0061176,GO:0061245,GO:0061339,GO:0061564,GO:0061670,GO:0061744,GO:0061842,GO:0065007,GO:0065008,GO:0070050,GO:0070201,GO:0070507,GO:0070727,GO:0070840,GO:0070887,GO:0070925,GO:0071310,GO:0071459,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072384,GO:0072393,GO:0090063,GO:0090087,GO:0090162,GO:0090224,GO:0090307,GO:0090316,GO:0090596,GO:0097435,GO:0097458,GO:0097479,GO:0097480,GO:0097711,GO:0098687,GO:0098793,GO:0098813,GO:0098916,GO:0098930,GO:0099003,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099514,GO:0099517,GO:0099518,GO:0099519,GO:0099536,GO:0099537,GO:0099558,GO:0099568,GO:0099643,GO:0099738,GO:0106027,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0120103,GO:0120111,GO:0140014,GO:0140056,GO:0150034,GO:1901360,GO:1901615,GO:1901950,GO:1901987,GO:1901990,GO:1902494,GO:1902749,GO:1902850,GO:1902903,GO:1902905,GO:1903047,GO:1903827,GO:1903829,GO:1904115,GO:1904396,GO:1904398,GO:1904951,GO:1905515,GO:1990049,GO:1990138,GO:1990535,GO:1990752,GO:2000026
EggNOG free text desc.microtubule binding
EggNOG OGsCOG5244@1,KOG0971@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCAP Gly-rich domain
Ec32 orthologEc-20_002330.1
Exons11
Model size2050
Cds size1101
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815950.137613-UTR-P-fluviatile_contig21:2089517..20896761622815950.137613-UTR-P-fluviatile_contig21:2089517..2089676Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2089518..2089676 +
1693563840.6696658-UTR-P-fluviatile_contig21:2089517..20896761693563840.6696658-UTR-P-fluviatile_contig21:2089517..2089676Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2089518..2089676 +
1622815950.1509511-UTR-P-fluviatile_contig21:2093277..20933021622815950.1509511-UTR-P-fluviatile_contig21:2093277..2093302Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2093278..2093302 +
1693563840.6831043-UTR-P-fluviatile_contig21:2093277..20933021693563840.6831043-UTR-P-fluviatile_contig21:2093277..2093302Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2093278..2093302 +
1622815950.2711694-UTR-P-fluviatile_contig21:2099195..20999601622815950.2711694-UTR-P-fluviatile_contig21:2099195..2099960Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2099196..2099960 +
1693563840.794425-UTR-P-fluviatile_contig21:2099195..20999601693563840.794425-UTR-P-fluviatile_contig21:2099195..2099960Porterinema fluviatile SAG_2381UTRP-fluviatile_contig21 2099196..2099960 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815950.1600735-CDS-P-fluviatile_contig21:2093302..20934721622815950.1600735-CDS-P-fluviatile_contig21:2093302..2093472Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2093303..2093472 +
1693563840.6921391-CDS-P-fluviatile_contig21:2093302..20934721693563840.6921391-CDS-P-fluviatile_contig21:2093302..2093472Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2093303..2093472 +
1622815950.1719582-CDS-P-fluviatile_contig21:2093899..20940341622815950.1719582-CDS-P-fluviatile_contig21:2093899..2094034Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2093900..2094034 +
1693563840.7026808-CDS-P-fluviatile_contig21:2093899..20940341693563840.7026808-CDS-P-fluviatile_contig21:2093899..2094034Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2093900..2094034 +
1622815950.1845672-CDS-P-fluviatile_contig21:2094476..20945081622815950.1845672-CDS-P-fluviatile_contig21:2094476..2094508Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2094477..2094508 +
1693563840.713347-CDS-P-fluviatile_contig21:2094476..20945081693563840.713347-CDS-P-fluviatile_contig21:2094476..2094508Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2094477..2094508 +
1622815950.1939309-CDS-P-fluviatile_contig21:2095050..20952911622815950.1939309-CDS-P-fluviatile_contig21:2095050..2095291Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2095051..2095291 +
1693563840.7244015-CDS-P-fluviatile_contig21:2095050..20952911693563840.7244015-CDS-P-fluviatile_contig21:2095050..2095291Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2095051..2095291 +
1622815950.2058756-CDS-P-fluviatile_contig21:2096460..20964971622815950.2058756-CDS-P-fluviatile_contig21:2096460..2096497Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2096461..2096497 +
1693563840.7327774-CDS-P-fluviatile_contig21:2096460..20964971693563840.7327774-CDS-P-fluviatile_contig21:2096460..2096497Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2096461..2096497 +
1622815950.2168517-CDS-P-fluviatile_contig21:2096977..20970401622815950.2168517-CDS-P-fluviatile_contig21:2096977..2097040Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2096978..2097040 +
1693563840.7405338-CDS-P-fluviatile_contig21:2096977..20970401693563840.7405338-CDS-P-fluviatile_contig21:2096977..2097040Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2096978..2097040 +
1622815950.2287827-CDS-P-fluviatile_contig21:2097559..20976441622815950.2287827-CDS-P-fluviatile_contig21:2097559..2097644Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2097560..2097644 +
1693563840.754-CDS-P-fluviatile_contig21:2097559..20976441693563840.754-CDS-P-fluviatile_contig21:2097559..2097644Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2097560..2097644 +
1622815950.2386386-CDS-P-fluviatile_contig21:2098170..20981841622815950.2386386-CDS-P-fluviatile_contig21:2098170..2098184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2098171..2098184 +
1693563840.7627885-CDS-P-fluviatile_contig21:2098170..20981841693563840.7627885-CDS-P-fluviatile_contig21:2098170..2098184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2098171..2098184 +
1622815950.250291-CDS-P-fluviatile_contig21:2098398..20985871622815950.250291-CDS-P-fluviatile_contig21:2098398..2098587Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2098399..2098587 +
1693563840.7722123-CDS-P-fluviatile_contig21:2098398..20985871693563840.7722123-CDS-P-fluviatile_contig21:2098398..2098587Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2098399..2098587 +
1622815950.2609193-CDS-P-fluviatile_contig21:2099060..20991951622815950.2609193-CDS-P-fluviatile_contig21:2099060..2099195Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2099061..2099195 +
1693563840.7819197-CDS-P-fluviatile_contig21:2099060..20991951693563840.7819197-CDS-P-fluviatile_contig21:2099060..2099195Porterinema fluviatile SAG_2381CDSP-fluviatile_contig21 2099061..2099195 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig21.4657.1prot_P-fluviatile_contig21.4657.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig21 2093303..2099195 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig21.4657.1

>prot_P-fluviatile_contig21.4657.1 ID=prot_P-fluviatile_contig21.4657.1|Name=mRNA_P-fluviatile_contig21.4657.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=367bp
MTAMYAQNLRPKVAAPRQARAQTAASGGKDGHGDRPASPAVGRRVRLIPK
GTPGIVRWVGPTHFAAGMWIGVELDSCEGKNDGEVQGSRYFSCKAGHGVF
VRPESIAAIKAEDFCPPTPPSPLHTHMLTSVRPHLPPSCLCKPQLPRKES
HNSLGSENFGTSFLPTSTAHGAGSDAGGARKMPNRTRRSVYGNDDQIIGR
ILASEAFARILSATVADRVREEVAKREAQAKVETEAILNRMCELEQMVDD
AGGAMDDIASMVQTISESIGGASNGLSPDRRDAATGSGNGNGGGDAGGGG
RDDARVAELTELLCALHDTCSQAAETFLQPKWKQNSATVQHLTQRVKELG
GKHRAGATPPPPPMEG*
back to top

mRNA from alignment at P-fluviatile_contig21:2089518..2099960+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig21.4657.1 ID=mRNA_P-fluviatile_contig21.4657.1|Name=mRNA_P-fluviatile_contig21.4657.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10443bp|location=Sequence derived from alignment at P-fluviatile_contig21:2089518..2099960+ (Porterinema fluviatile SAG_2381)
TATTACGTCTCGCCGACCTGCTGGCATACTTCCCGGTGTCTGGGTGACGA GACAACCCGTTGAGCTTTTTGTTGGGGAGGAGCGAAAGGGAGCGAAAGGC GCGCGCATTCGGTAGCCAACGGGCTGTCGGCCTGCTTAGTGGGCGTGATT CTGCACACGGTAAGTCTCGAACGTGTCAAGTTTGTCCAGATTGCCATTAC CGCACAGCGCAGCATGCAGCGGGTTCGTAGAGGAGCAGAGGAACTCGCGC GGCCGTTCCCCTTGCCCGCTCTCCACAGCGTTGACACACATGGGACGTGA CCACATGTTCTGCCTGATCCCGCGCAAAAGTCGGCAAGGGCCGAAGTTGA CTTCGCCGAAGGACAAGATGGGTCGGATAGGCTAATGAGACTGTGTACAT GATGCAGCGATCACTACTGTTCATCAAAGTCCCTGATGGTACAGGACCGC GACAAGTCGTTTAGGATGCCGTTGATAACACATGAGACTAGGTAGTCCTG TACGCCGTAAATGTTGGTTGCTGGCAACACTGCTGTCTGGGGGCACTATC AGCACCCACTCACCCGCGCATTGCCACCCATTATCGATAGCGAATGACGG GTCCATATTCGTCTAGCGAAGAAGTAGAGATAGCCGCATAGGCTGCGGCA GATGACTCTCGCGGTGTACACAAAAGTTTTATCGAATGAACGCAAGTACT CAGTACAAGACAGCAAGTTGTAGTGACTTGTAGTCTCTCGCTGCCTGGAA ACGTTTCAACGTTCACGTGTTTGCTCGGCTGCTCTCTGTTGTCCAGTCGG TCAGTCGGTCAGCCGCCACATAGCCGCGGCACACACAAGGAGAGCTTCTC GTCACAAACCACGTGCACAGCAACCTCTCGCGCACATGATGTGTCACAGG AAAAATCTCTCCACACAACCGTCTTGGATTTTGAAAACGCTGCTGAGGTG GTACTGGACGACCGGGACGGTTTTAAATGTGAACAAAAACAACCACAACA GCTGTCTAGCAACAGATCGAGAGAACACACACCCGCTGCGAAATAAGGGT TGAAGGCATAGTATTCAGCCGTTATATCCAAGTGCCGCCTTACTTCGCGG AGCGCGCGCACAGCTACACATGGTGGGAGTTTTATTATTTTCAGCTGATT ATTTGCGTCTAAGTACTCCGGAGTACCAGGTATTTTTTGTAAGTCCTGCG TTGTTTTATGCCGCACATTAACCGTGTGCCGAGCTTGTGGTAGCTCAACT TCCGCGCTTCCAAACACGGCCATTTAGTCCCGGGGTGTGTGCTGTGTGCG TCGCCGTGCCCAGCGTTCGAATCTCTGTTAAGGAATGAAGAGCTGTGACC TGTATGGGCGCAACTGAAGCCCGTAAGGCCGATACACCAAGGCAGGAAAG TAGGCTATACGCTGATTGAGTATCATGGACGGGACCCCTGGAGACCTTGA TTTGGAAAGTGAAGTGACGTGTAGCAAAGAATCAAAGCCAGAAAGAATGA CCCGACTTTGGACTTGGTCCGCCCAAATTCAGCACTGCCGTTAAACAAGT TCAACAAATGCCTGCAGGGTAATCTCCGCTGACAAGCTAACACCATGAGA GCTATAGAGAAAGACCCGCTTCCGCCGGGTGAGCTTGGTTTCCGGACTGA CTCAGTGTGTCGGCCGTTTGGCTTGGAGGAGTCAGCCTGAGCTCTCTGGC TGTTTTCCATCGTTTTGGGCTCCAACAAGCCCGACCTCCCCCGCGCCCCA CAATTGACCTAAAGTATGGCCTCTATTTACTGCGCCTTCTTGCTACATTT CAGGGCACGCGACCACTCCCACACACCAAAAAGCGAGGCCCCGGGAATGT CTCCTGCAGCATTTTCTTGTGCGCTGAGAGCTAGAGACTCAACGCAGCAC AGCACCTCGCTCCCGTCCCTCTCGTCTGGCGAATTTCGTGGGAGTCATTT TGTGGTTTGGAAGGGCAAAAGGAGGACCTTCCCGACCTTCACTTCGAATT TTCAGGCAGTGGACCTGAAAAGTTGGCCCTACCGCTGCACATACCGCCTG AAGGCTGTCATCTCTCATGGTCGGCACTGTTTTCGATACTTCTTGCTGCT GCCGGGCGGCGAATAATAGGAGTACAGGAAAGTGTTCGGAGGGCACTGGC TCCGGTAAATCTGCGCGCGCGCCCTCTCCTGCCTTAAACGAAACAGTCAG TATCTAGCAAGCCACAGTCAGTGCGTACCTGTACCGTGTGAAGGAAATCA CACACGTTTCCATACGTGAAACCATTATTCAACGGGTCTGGGACTCTCAC TATTCTCCACCTTAGACGAAGCGCACAGCAGGTCTTCACCATGCACTGGA GCAGATTCTGGCGTAGATCGCATCTGCGATTAGTGGGCTCGCCGCAGTGC GAGCATGCCCGCGAAAAACACCGGCATTTTTCAAGATAGACCGGCACTTC TTCGGGCTGGGTAACGTGCGGTTTAGCGTAGGGATGAGCAGTCGTGCAAA GCGAATTGTGGCCGGCACTCTACCGGCCTTTTAACAATTTTCAGCTGGCG CAACTGAGGCGCGGGCCAGCGCCCCACTGCTGTATGCCCTTCAATTCCGT CGCGGAGGGTGACGACCAGAGAGAGGATGACAATAGGCAAGAGCTGTGTT TGCCGCGTCCTGGGTGGCATGTCGAAAGGACAATGCCGGAAGGGCTCCAT GTACGTCAGAAATTCGGAGCCTGCTGTCGGAAAAAGAAACAAAGCTTGGT AGAGTGTAGCCCATGCGCATTTGAGGGCTTCCGTCCGCTATCTTTATCTC CTGTTGAGAATGCTGGTCTGGGAGGCGGACATGCGGCGGCATCTCGGCAT TTCTGTATTACATGCCACATAAAACACATGGCACGTACAACTGAGAGTCG CGGATGTTGATGGTAAAACGGTCTTTGTATCAGGGTTCGGGATGACGCTC CGGTCTCGGATTGATGCGCTTCGATGCAATGACTACAAGGCTTACTACAG GTAAACACTCCTCCGCCCGCGCCCCTCACGACTCTAAGGAAATGGCCACC CGTCTGCGAGTTATTGCTGTCAATACCATCGGTAGAAGCTGAAAACCTAC CCCACTAGACTAGTCAGCGCTGACTAGTCTAGTGGGTTGGTTTTCAGCTT CTACAAAAGTAAGTCGTGGGGTCCGGATCCCCCTCACTATACTTCCGAGG AGGGTGGCGATCCCCTCGCCAGCCGCTACTATCCATCTATCGTTGTTTTC ACTTCTTTTTTCTCGGAGAAAAAGCCACCTCGTGTGCACGGTCTGGGACT CGAACCCACGGCTTACCTTTGCGGGAGCTGGAAACCAACCCACTAGACTA ATAGTCAGCTTTGACTAGTCTAGTGGGTTGGTTTCAGCTTCTACACATCC CGAGACCCAACCAAGTAAGCTACAGAGATGTTAAACGCGGCTATCGCCGC ACCCCTCGCACTCTGACCAGCCGCCGACCCATTATCCAAATGCAGTGGTA AAAACCCCAAAAGACTTATGTCGTCCCTCCTCGATACCCCTCTCGCTCCT GGGCTTCTGACACAGCGGCGTGCGGGGTCCAGCAGACGGCTGGTCCGGAG TTTGTGTGAAATCTGAAGCTATGCTTCTCATCCCTGGACGCGGCACACCG AAAACCGGTATCACTTGAAGAAGCACGAACCTTTCGCCATCCATCTCCCC CCCCCCCTCCCCTGCCTGCTCCCCTCCCCGATGCACAACGTGCTCTTTGT CTCCGTCTAGCCCAAGCCGTAGCAGAGGTACCAGGATGACCGCCATGTAC GCGCAGAATCTGCGTCCGAAGGTTGCCGCCCCTCGACAGGCTAGAGCGCA AACCGCGGCCAGCGGCGGCAAGGACGGCCACGGTGACCGTCCTGCTTCTC CCGCCGTCGGCCGGCGAGTGCGCTTGATCCCGAAGGGCACGCCGGGCATC GTGCGGTGAGGGGCCCGGGGACGTTGCGGGGGAAGGGGTGGTGTGTTTTT GTTTGGGGGGCGGGCAGTCTCAGAAGACTGGGTAGCCGTGGTGTTTGGCC AACCATCATTTTAGATAGGAACGAAGGTCGCGGGGAGTTTGCGACGGGTG TGTTCAACATAGAGTGTAACACAAGCTAGGCCAGATCCAAAAAAGTGTCC TGACATCGTCACGCGATGTCAGAGTTGTAGAAGACGTTCAAACTTTCGTA TTTCAATGCGGATGTACGACGTATTGTTCGCTTGGTCGAGGTAGAATGTT ACGGTGCGTGCAACGGCAACACTCGTTTTTTTTTCCTCTTCTCAACCAAT CCGTTGGAGATCAGCGCGTACGTCTCCACAATTGACGCCGGCATTGATCG TGCGTGAAACATGAAACATAACCACCGTGTAGGTGGGTGGGCCCGACGCA CTTCGCGGCCGGCATGTGGATCGGCGTGGAGCTAGACAGCTGTGAGGGCA AGAACGACGGGGAGGTGCAAGGATCGCGCTATTTCTCTTGCAAGGCCGGC CACGGGGTGTTCGTGAGGTAATCACAGACAGACAGACGCACACACAGAGC GACAGATGGAGACAGGCAGGTACTGCCTTCCGTTTTGCGTGGGTGCTGAC GAAGCGTGAAGGAGGAAGAACAACAGTTGTTGCAGACAGGGCCTCCCGTG TCTTTGGTGTGTTTGTGGTTCGTGTGTGTGCGATGAGACCCTTTCCGGAT GGCGTGTTTCAGTCGTGATTGGCTTTTGAAGCCACACATGGATAGAAATA AGTGCACGCGCTAGGCAATTTAGAAGGCTACGAGGTGATGCTGCTGCTCT CACTTTTGCTGCTCTTACAAAACTGTTTTTATGGTCTTCAGTTTTGGCGT CTGTCACGCGTAATTCTAGAAGCACGTGGACTGGACGAGCTCAGCAAACA ACCGAGCAACTCAAAGGCAACCCTGGCCCCGTTCCCCTCTTTCTGCCCCC GTTTCCCAGGCCGGAAAGCATCGCTGCGATAAAGGCGGAGGGTGTGTCCA CTTCGCCCAAGGAAATCCGGCGCCCCGTTGCCGGCACACCGCCGCCGGAT TCCAAATCGGTAGGCGGAAAGGGGCAGAAGGGGGGAGTTGGGGCACGTGG TTTCGTAAGCGATCAAAAGAACGGCCGAAAACCGTACAGCTTGCAATCCA TCGCAGCTGGGGGTGTTTCATCCAGGAGCTCAAGTGGTAGTGACGTTTTC TTCTCCGTGTGAAATTTATGCGTTTGTACCCTCCCGTTCCGTCGTTTCTT TTCGGGAGGCTTCGAGAGTCCCCGCGGGGTCCATGATGTAATCGCATTGG TCGAGCCTTTTGATGCCCTGGACGTGTGTCATGACGCTATCTGTCCTCGT TTCTTATGCAACCTAATCTGTAATTACTAAAGTTGCTTTGCCGGGGCCGT CGCGGAGTCAAGCTCGGCCCACCCTGCGGCGACAGCTCCGATACAGCAGT CCGCGCATCGGAAGAAAAGCAAATTGAGAAAAATCTTCAGGCGTCGAGCC ATTGACATCTAACGCGCCTCTCCGAAAAAGAAGACTTCTGCCCCCCCACC CCCCCTTCCcccctccaCACACACATGCTCACCTCTGTACGCCCACACTT GCCCCCGTCCTGTTTGTGTAAACCCCAGTTACCCCGCAAAGAGTCACATA ACTCGCTAGGGTCGGAAAACTTCGGCACATCGTTTCTCCCCACCAGTACG GCGCACGGGGCAGGTTCCGATGCAGGCGGGGCGCGGAAAATGCCCAACAG AACCAGGAGGTCAGTTTATGGAAAGTGCCAACAGTTCGCGGCATTCTTAT TGAGACGAACCAAAACCAACTCCAGTCGCATACAAGCAACGCCCTTACAT CTCTCAAGACGGGCTGAACAAATGATCTCTGCCTCTCTCGCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCT TGTGTGTGTGCGTGTGTAAGAGAGAGAGAGAGAGAGATGGAGACAGAGAG AGAGAGGGAGAGAGAGAGAGAGAGAGACAGAGAGACAGAGAGCAATCAGA GAGAGAGAGACAGAGAGACAGAGAGCAATCAGAGAGAGAGAGAGACAACG CCGCTGCATTCCTCGAACTGTCAAGCCGGATCACTCGATGGAACAGCAGA GCTTTCGAGAAAAGCTAGCTTCACGAACTGCCTTTGAGCTGATGCCGCCG CAGCTTGTTGGCGGACCAGGGCGCATGTCTGAGGCGAGAGAAGTTGGAGT GAGCCGAGGCGGATCTCTCGCCCGCGATCTGTCGTCAATTTCGTGGCCTC TTTGTGTAAATCTACGCCCTGCAGCCAGGTCACCGCAGCTACCTACGGGC ACGAACCTTTATGATGCTTCTCCCATGCGGGTGCTGCTGACATCCCCGAT CCACCGCTTCGACAGGGAGAGGAGAAGGAAGCGGAGGGGGTTCGAGAGAT CCATGTAGTGTGTAAGAGAGAGAGGGAAAGAGGAAGTCGGCGATTTCTCT TCCCGTGGGTCTACCACTCTACCCTGCTTGTGCCCCTCTTCCGCATTCCC ATTTCCCAACTGTTCCAATCCCCAGCCGTTCGCAGTAGTCGTCGTTTGCG CGCTCGGTGCACGGATTTTTGCCGTGGTCTTTCCCTTCACCTTCGTAGCT TTCCTGCCCCTCTGGCAGCGCGACGCAAACCCCCCTGACGGGTTTGGCGT CCTACGCGTCGTCTTGCTCCAGCGCGTCGGTTTTCCTACCCCGCTTAACC CCACTGAATGCTGGGCTTTCTCCGCTCACCGCTCTTGTTGCCGATCCCCG CACCTTCTTTGTTTTTATCCCTATTTCTGTGCTCAACCTTCGAAATTGCC CTCTCTTTTTTGTTTTCTTCTGCTCTTTTTATCTGCGTTTGCTCGGTTTG TTCTTTGTCGTGCACGGCCCTGTACGACAAGCAGTGCCGCCAGCGACGAC CAAATAATCGGGCGGATTCTCGCATCAGAGGTGTGTATGTGACGGTAACC GTTAGCGTATGGACGCGACAGAGCGGGAGGTCGGGCGGGGAAGGGGGTGG ATTGCAAATGACTGGCAAAGCCCAGAAGAGACGAGAGCAATAATCACCGC GCGCGCATCCGGCCCAATGCATGTAAATTTTCGTCGAAACGAATGTCGAT GTTTGGCGTCCTCGCGCTGCAGCGTTCATTCTCAGCGCGATCATCAATCC TATCGTCGCGCATTCACCCATCGCACCCGTCGTGTCTTGCACTAAGCGGT GTGGGATGGGGTGGGGTGGTACGTGTGACATGTTGTTGTACTCCTAAGGA GAGGACAACCCAGGCTGCACCGCGCACAAAAAAAATCTCCACCGTCTTTG TTCCAAAGACCTCAGCCTGCGCGTCGTTGGCGGCGGGACCTCTTTGTTTT TGTTGGCCAACACCACCGCGCTGGTCTGTGTACCTGCGGTTCGTTGCGTG CGTTGGACAGGCGTTCGCTCGCATCCTGTCGGCGACCGTGGCGGACCGCG TTAGGGAAGAGGTGGCAAAGAGGGTAAGTGATGAGAAGAGGCATATGTCG GTCAGGGGTAGTAGTCGAGGCAGCCGGGGGGAGGTCATCATTAATAACCA TGGCGGTCCCGGTACTATAGAGTTGATCCGTTCACTCTGGACCCAGAAAT TCTAAGCTGTTCGAGTCGGCTTCATCGTGTCCGGAGCCATGATATCGTGG GGAAGTGCGCTGGGGAAGTGCGCGCGGTTCTCGTGCAAACGCAAGGCGAC TTCAATCATCGTCGTTGCACGAGTGTATCAGTGGGCAAACAGCAACCACA CAGCCTAGCATAAGTCCAAGGGTGAAAACGGTAATGACATCGTGACGATC AATTACAGCCGTGGTAGGTACGCGCTGCTTTGAGTCGTCAAGACGTTGGT ACTCGCCGAGACTGCCGCGTCGAAAGGGTAGCACACTTTGCGGAAATGGG GCGTAGGGAAGCGTTTGTTGCGCCGCCGTGCTGTGCGATGGAGTCATTCG CCGATTTTTTGTTTACTATTTTTGCTCGTCCGCGCCGCGCAGGAAGCCCA GGCCAAGGTCGAGACTGAGGCGATTCTGAACCGGATGTGCGAACTGGAGC AGATGGTGGATGACGCTGGTGGAGCAAGTGAGTGGTGGCGTTTCAGGGTG TCTGTTCCCTTTTGTCGTTTTCTTTTGCGGAAGAACTGCATGAGTACTCT CGATCTCAGCGTGTGTTTTGGGGAATAATTCTTGCCTGTTAAATACAAGT ACGAAAGCAGTAGGACGGCCAGGGAATATTTCTTGCTTGCTAGATACAAC TACGAGAGTAGTAGGACGACCAGCATTTTTAGTTTCCAAATGGGTAGAAG CCTTTGATGGTTGGCTTTGTCAAGGGATGGATGCTGTCCATTCTAGAGAT GCACGCTTTTTTTCCGTTGTGTTCTCGGCATTTGGAGGTCCAGCGATGAA TTAAGAAAAACTACCTCGGCTCTCCGACTCTTTCCGAGAAAGCTTGCCGC CTAACGGACGACCACATGGGAGAACACTGAAGCTAAATTTTCTGCTGCCG ATTCGTTCGCCCCCCGCTGCCGTCCTTGGCGCTTGTGACCTGCTTCACGA CCGACGTTGTCGCCGTTCGGTTCTACCTTCTCCTACCGCCGCCGCCGTTC CAGTGGACGACATCGCCGTAAGTGATTCATGCCTCTTGTCTTTTTGTGTT CGAGCAAAGCTGACCCTTCGCGTGACTGCGAGCGCCCGTAAATCAGCCCC CCGCACACACTCCGCGCCCTAGGCGCGCGAACGCGCGCTCGCGCTCCTCG TACTGATTTCCCCTTGGTGTGCATGCACCACTTCTACTGTTTCCGGTCTC CACTGTGTTTTTTGCCCACCCGAACGAACAGTCCATGGTCCAGACGATCT CCGAGAGCATTGGAGGCGCGTCCAACGGGCTTTCGCCGGATAGGAGAGAC GCGGCGACGGGGAGCGGCAACGGCAACGGCGGCGGCGATGCTGGAGGGGG CGGGCGAGATGACGCGCGCGTGGCGGAGTTGACGGAGCTGCTGTGCGCCT TGCACGACACGTGTTCTCAGGTGCGGCGGAAGACGGTTTCAATCGCTCGA CGGCGCCGGCGGCGATGGTGGTCGTGCTCCGCTTCGTTTCAGTCCAGGAG CGGATTCGAAGGGAGAGTGTGTGGTCGTCAGTAGAAATCGCGCGTTTGTT TTGTTGGGGTTCTCGAGACTGCGTGGGAAGATCGAGCCCATCGTTTCAAT CTGCTATTTTTCGAAGGACCACGCTGTCGTGGAAGTTTCAATGCGTGCGC TGCTGGTTTGAATGATATCGGCGACACTCGAGTTTCTATAGCGCAACATA ATGTTCGGCAAAAGTCGGTCTTGGACGGACCGAGGCGTGTTGGTGTTGAG ATAGCGTATATGAAGAAACAAAAAGCAATGCAACCACGTTCTTTGATTCT GCATTTCCGTATCCCCCCCCCCTCTCATATCGTGACGTTGTTGTCTCTCC TTGTCTTTTTCTGTCCTGTGTTGGATCACCCAACCGCTGTCAGGCGGCCG AGACTTTTCTGCAGCCCAAGTGGAAGCAGAACTCGGCAACGGTGCAGCAC CTGACGCAGCGTGTGAAGGAGCTCGGGGGCAAGCACCGGGCGGGCGCTAC TCCCCCGCCACCCCCAATGGAGGGCTGAAGAGGGCGGATGGGAAAGCGAC GGGAGGCAGAAGGCAGGGCACTGGTAATTCGATGCATCGCAGCTCGCTTT TTGGCGTATCCAATCCATCAGCAATGTCGCAAGGCTCTAGCAACAGCAAG GGAGTAAGCCGCTGCTGCTGCTTAAAAAGTCGAAAGCTACAGTTTGTTTT CATCGAGAGGATGCAGTGCGTTTCCAGGGCTCTAGATACATTGTCCGTTT CGCGGCGTGCCAAGGGTTTCCAAAAATGCGCTCGCAGGGGGCAGGCAAGC CGAACCAAATCAGCTTTCGCAGAGTGGGTTCCGGTCTTGCCGAGCCAATC ACTCCGCCTAGTTTCCCGGTGGGACGGAACTCGACAACATTTATGGTATT TTTGTTTTATTTGGGAGGGGTAACGGACGTCGCATTGAAGGGATAGGGGA GAGGGCATACACCTCTCCAACTTTTTGTTCACCAAACGAGAGGTCAGCAA AGAGAGCACTCTCCGCCCCTCAAAGAAGCAGACAAGGCACATCAGCAGCC GAACGCACCGACGAAGTTGTTCGTGTTGGCGAAACGTGATGTAGCGTTGT TTCATTTTGTCTTGTCTTCATTCATTTCATTTGAGTGGTGGATAGATGGC AGACACACCGTCCAGACGTGAGTGATTTGTTGAAGATAGGGTAGGCAGTC GAGGGAGGCCCGCGAGTGAAGACCCCCTTGCCTCCTCCCCCCCACAGAGA TAGGAACGTTTTTATGCAGCAGGTGCACGCGGAGTTCCGGACC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig21:2089518..2099960+

>mRNA_P-fluviatile_contig21.4657.1 ID=mRNA_P-fluviatile_contig21.4657.1|Name=mRNA_P-fluviatile_contig21.4657.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2202bp|location=Sequence derived from alignment at P-fluviatile_contig21:2089518..2099960+ (Porterinema fluviatile SAG_2381)
ATGACCGCCATGTACGCGCAGAATCTGCGTCCGAAGGTTGCCGCCCCTCG
ACAGGCTAGAGCGCAAACCGCGGCCAGCGGCGGCAAGGACGGCCACGGTG
ACCGTCCTGCTTCTCCCGCCGTCGGCCGGCGAGTGCGCTTGATCCCGAAG
GGCACGCCGGGCATCGTGCGATGACCGCCATGTACGCGCAGAATCTGCGT
CCGAAGGTTGCCGCCCCTCGACAGGCTAGAGCGCAAACCGCGGCCAGCGG
CGGCAAGGACGGCCACGGTGACCGTCCTGCTTCTCCCGCCGTCGGCCGGC
GAGTGCGCTTGATCCCGAAGGGCACGCCGGGCATCGTGCGGTGGGTGGGC
CCGACGCACTTCGCGGCCGGCATGTGGATCGGCGTGGAGCTAGACAGCTG
TGAGGGCAAGAACGACGGGGAGGTGCAAGGATCGCGCTATTTCTCTTGCA
AGGCCGGCCACGGGGTGTTCGTGAGGTGGGTGGGCCCGACGCACTTCGCG
GCCGGCATGTGGATCGGCGTGGAGCTAGACAGCTGTGAGGGCAAGAACGA
CGGGGAGGTGCAAGGATCGCGCTATTTCTCTTGCAAGGCCGGCCACGGGG
TGTTCGTGAGGCCGGAAAGCATCGCTGCGATAAAGGCGGAGGGCCGGAAA
GCATCGCTGCGATAAAGGCGGAGGACTTCTGCCCCCCCACCCCCCCTTCC
cccctccaCACACACATGCTCACCTCTGTACGCCCACACTTGCCCCCGTC
CTGTTTGTGTAAACCCCAGTTACCCCGCAAAGAGTCACATAACTCGCTAG
GGTCGGAAAACTTCGGCACATCGTTTCTCCCCACCAGTACGGCGCACGGG
GCAGGTTCCGATGCAGGCGGGGCGCGGAAAATGCCCAACAGAACCAGGAG
GTCAGTTTATGGAAAACTTCTGCCCCCCCACCCCCCCTTCCcccctccaC
ACACACATGCTCACCTCTGTACGCCCACACTTGCCCCCGTCCTGTTTGTG
TAAACCCCAGTTACCCCGCAAAGAGTCACATAACTCGCTAGGGTCGGAAA
ACTTCGGCACATCGTTTCTCCCCACCAGTACGGCGCACGGGGCAGGTTCC
GATGCAGGCGGGGCGCGGAAAATGCCCAACAGAACCAGGAGGTCAGTTTA
TGGAAACGACGACCAAATAATCGGGCGGATTCTCGCATCAGAGCGACGAC
CAAATAATCGGGCGGATTCTCGCATCAGAGGCGTTCGCTCGCATCCTGTC
GGCGACCGTGGCGGACCGCGTTAGGGAAGAGGTGGCAAAGAGGGCGTTCG
CTCGCATCCTGTCGGCGACCGTGGCGGACCGCGTTAGGGAAGAGGTGGCA
AAGAGGGAAGCCCAGGCCAAGGTCGAGACTGAGGCGATTCTGAACCGGAT
GTGCGAACTGGAGCAGATGGTGGATGACGCTGGTGGAGCAAGAAGCCCAG
GCCAAGGTCGAGACTGAGGCGATTCTGAACCGGATGTGCGAACTGGAGCA
GATGGTGGATGACGCTGGTGGAGCAATGGACGACATCGCCTGGACGACAT
CGCCTCCATGGTCCAGACGATCTCCGAGAGCATTGGAGGCGCGTCCAACG
GGCTTTCGCCGGATAGGAGAGACGCGGCGACGGGGAGCGGCAACGGCAAC
GGCGGCGGCGATGCTGGAGGGGGCGGGCGAGATGACGCGCGCGTGGCGGA
GTTGACGGAGCTGCTGTGCGCCTTGCACGACACGTGTTCTCAGTCCATGG
TCCAGACGATCTCCGAGAGCATTGGAGGCGCGTCCAACGGGCTTTCGCCG
GATAGGAGAGACGCGGCGACGGGGAGCGGCAACGGCAACGGCGGCGGCGA
TGCTGGAGGGGGCGGGCGAGATGACGCGCGCGTGGCGGAGTTGACGGAGC
TGCTGTGCGCCTTGCACGACACGTGTTCTCAGGCGGCCGAGACTTTTCTG
CAGCCCAAGTGGAAGCAGAACTCGGCAACGGTGCAGCACCTGACGCAGCG
TGTGAAGGAGCTCGGGGGCAAGCACCGGGCGGGCGCTACTCCCCCGCCAC
CCCCAATGGAGGGCTGAGCGGCCGAGACTTTTCTGCAGCCCAAGTGGAAG
CAGAACTCGGCAACGGTGCAGCACCTGACGCAGCGTGTGAAGGAGCTCGG
GGGCAAGCACCGGGCGGGCGCTACTCCCCCGCCACCCCCAATGGAGGGCT
GA
back to top