|
|
Homology
BLAST of mRNA_P-fluviatile_contig1.412.1 vs. uniprot
Match: D7G5E1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5E1_ECTSI) HSP 1 Score: 414 bits (1065), Expect = 2.150e-130 Identity = 249/443 (56.21%), Postives = 286/443 (64.56%), Query Frame = 1
Query: 1 NITTMALAGVKPTRKAPQFDREEAEDRAYRLLSEGELFYVETDIPEDL-LVPNRHDHGHVGGVSLEIITAARAQGGEGQQLASPPSKGPGSDSPSAHTAATSRSSSQDTEENDSKMWQQHARSHHVYPXXXXXXXQLPFAGLGARVLAVSP--EPFYPNGNRISLREAQEWDFQKKLEDIELSETRNRQRSFSEPRLTSLRAGGGANHQVSPTLQRXXXXXXXXXXXXXXXXDPCAEACEGLRDGLERAWSRILGSLGGGRGGEGAWVGNHGIGTLRSRSPT---RVKSVCRNFASCTSTKTYEMTPAY--KEALQRLGVPPQTS----------TFTMHIAGYRLVSTILGDHAEYEVRMKGGGRHWSRWHRFSRFKTIAGCSRGDPDAAAAWLSVLRAKPHYRCLKPDYLALKCNLLEVFLQQVLFAMPTPAILIHFVSAK 1275
NI TM LAG++P RKA FDREEAEDRA+R+LSEGELFYVETD+ D+ L P RHDH H+GGVSLE ITAAR L +P +GP S T ATSR+SSQDT EN+SK W+Q H P A AV EPFYP NRISL+EAQEWDF KKLED+ SE+R R+RSFSEP+L+SL NH +R + CA+AC L +GL R WS + NHGIGTLRS S T RV R+FASCTSTKT+E++ KEAL++LGV P S TFTMHIAGYR+VSTILG HAEYEVR+KG GR WS+W RFS+FKTIA C++GDPDAAAAW V+RAKPHYRCL PDYLA KCNLLE FLQQVLFAMPTPA+LIHFVS K
Sbjct: 2 NIMTMPLAGMEPKRKAESFDREEAEDRAFRMLSEGELFYVETDVMHDVSLDPARHDHSHLGGVSLETITAAR------HLLEAPAKRGPSS----VETEATSRTSSQDTAENESKGWEQQEVHAHRRPAA---------AXXXXXXXAVKSNVEPFYPAANRISLKEAQEWDFSKKLEDL-ASESRGRERSFSEPQLSSLSHSN--NHHWKDVNERAEC-------------EACADACAALTEGLRRVWSLVFPEE----------QHNHGIGTLRSPSSTANMRVNHSSRHFASCTSTKTFEVSTNERDKEALEKLGVVPDISYHVVGTPASMTFTMHIAGYRVVSTILGMHAEYEVRLKGAGRRWSKWQRFSKFKTIAACTQGDPDAAAAWRRVVRAKPHYRCLNPDYLAHKCNLLETFLQQVLFAMPTPALLIHFVSQK 399
BLAST of mRNA_P-fluviatile_contig1.412.1 vs. uniprot
Match: D7FHG1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG1_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 7.130e-10 Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 865 ASCTSTKTYEMTPAYKEALQRLGVPPQTSTFTMHIAGYRLVSTILGDHAEYEVRMKGGGRHWSRWHRFSRFKTIAGCSRGDP--DAAAAWLSVLRAKPHYRCLKPDYLALKCNLLEVFLQQVLFAMPTPAILIHFVSAK 1275
A T+TKT+ Q +G P+ ++ R +S HAEY+V + + W R+S FK +A ++ D AW + + + +RCL+ +YL KC+LLE FL Q LF +PTP++L++FV A+
Sbjct: 178 AQVTTTKTFR---------QGMGQQPEPYAVSIGSTRVRRLSP-FAVHAEYQVLVSTKDQVHKSWKRYSDFKLLAEYAKISDLRDTVKAWAHIQQTQRWFRCLEANYLKTKCSLLERFLAQFLFEVPTPSLLMNFVGAQ 306
BLAST of mRNA_P-fluviatile_contig1.412.1 vs. uniprot
Match: A0A7S3XY65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY65_HETAK) HSP 1 Score: 53.1 bits (126), Expect = 9.430e-5 Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 1
Query: 1006 HAEYEVRMKGGGRHWSRWHRFSRFKTIAGCSRGDPD--------AAAAWLSVLRAKPHYRCLKPDYLALKCNLLEVFLQQVLFAMPTPAILIHFV 1266
HAEY V + G W R++ FK +A D D A +W S+ R + YRCL +YLALKC +L+ FLQ +++ P+ + F+
Sbjct: 12 HAEYLVVLLVGAHRIGVWRRYTEFKGLAE-RLADRDEGKDQYRNALLSWESLRRKRRWYRCLDREYLALKCFMLQRFLQDLVYEAIHPSAIREFL 105
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 73.6 |
| Seed ortholog evalue | 2.6e-10 |
| Seed eggNOG ortholog | 2880.D7FHG1 |
| EggNOG OGs | 2C38U@1,2RHZN@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Phox homologous domain |
| Ec32 ortholog | Ec-00_008730.1 |
| Exons | 5 |
| Model size | 3703 |
| Cds size | 1266 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815332.0131767-UTR-P-fluviatile_contig1:4666572..4666584 | 1622815332.0131767-UTR-P-fluviatile_contig1:4666572..4666584 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4666573..4666584 + |
| 1693561525.3001266-UTR-P-fluviatile_contig1:4666572..4666584 | 1693561525.3001266-UTR-P-fluviatile_contig1:4666572..4666584 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4666573..4666584 + |
| 1622815332.1054533-UTR-P-fluviatile_contig1:4671002..4673427 | 1622815332.1054533-UTR-P-fluviatile_contig1:4671002..4673427 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4671003..4673427 + |
| 1693561525.3662739-UTR-P-fluviatile_contig1:4671002..4673427 | 1693561525.3662739-UTR-P-fluviatile_contig1:4671002..4673427 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig1 4671003..4673427 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815332.0321836-CDS-P-fluviatile_contig1:4666584..4666675 | 1622815332.0321836-CDS-P-fluviatile_contig1:4666584..4666675 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4666585..4666675 + |
| 1693561525.313559-CDS-P-fluviatile_contig1:4666584..4666675 | 1693561525.313559-CDS-P-fluviatile_contig1:4666584..4666675 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4666585..4666675 + |
| 1622815332.0442111-CDS-P-fluviatile_contig1:4668853..4669365 | 1622815332.0442111-CDS-P-fluviatile_contig1:4668853..4669365 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4668854..4669365 + |
| 1693561525.3212981-CDS-P-fluviatile_contig1:4668853..4669365 | 1693561525.3212981-CDS-P-fluviatile_contig1:4668853..4669365 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4668854..4669365 + |
| 1622815332.0567486-CDS-P-fluviatile_contig1:4669473..4669838 | 1622815332.0567486-CDS-P-fluviatile_contig1:4669473..4669838 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4669474..4669838 + |
| 1693561525.3314664-CDS-P-fluviatile_contig1:4669473..4669838 | 1693561525.3314664-CDS-P-fluviatile_contig1:4669473..4669838 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4669474..4669838 + |
| 1622815332.0737278-CDS-P-fluviatile_contig1:4670446..4670675 | 1622815332.0737278-CDS-P-fluviatile_contig1:4670446..4670675 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4670447..4670675 + |
| 1693561525.3434458-CDS-P-fluviatile_contig1:4670446..4670675 | 1693561525.3434458-CDS-P-fluviatile_contig1:4670446..4670675 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4670447..4670675 + |
| 1622815332.0884125-CDS-P-fluviatile_contig1:4670933..4671002 | 1622815332.0884125-CDS-P-fluviatile_contig1:4670933..4671002 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4670934..4671002 + |
| 1693561525.3520951-CDS-P-fluviatile_contig1:4670933..4671002 | 1693561525.3520951-CDS-P-fluviatile_contig1:4670933..4671002 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig1 4670934..4671002 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.412.1 >prot_P-fluviatile_contig1.412.1 ID=prot_P-fluviatile_contig1.412.1|Name=mRNA_P-fluviatile_contig1.412.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=422bp
MALAGVKPTRKAPQFDREEAEDRAYRLLSEGELFYVETDIPEDLLVPNRH DHGHVGGVSLEIITAARAQGGEGQQLASPPSKGPGSDSPSAHTAATSRSS SQDTEENDSKMWQQHARSHHVYPYPQQQQQQLPFAGLGARVLAVSPEPFY PNGNRISLREAQEWDFQKKLEDIELSETRNRQRSFSEPRLTSLRAGGGAN HQVSPTLQRRRWDDDNCGGGGGGGGDPCAEACEGLRDGLERAWSRILGSL GGGRGGEGAWVGNHGIGTLRSRSPTRVKSVCRNFASCTSTKTYEMTPAYK EALQRLGVPPQTSTFTMHIAGYRLVSTILGDHAEYEVRMKGGGRHWSRWH RFSRFKTIAGCSRGDPDAAAAWLSVLRAKPHYRCLKPDYLALKCNLLEVF LQQVLFAMPTPAILIHFVSAK* back to topmRNA from alignment at P-fluviatile_contig1:4666573..4673427+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig1.412.1 ID=mRNA_P-fluviatile_contig1.412.1|Name=mRNA_P-fluviatile_contig1.412.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6855bp|location=Sequence derived from alignment at P-fluviatile_contig1:4666573..4673427+ (Porterinema fluviatile SAG_2381) AACATAACCACTATGGCGCTCGCGGGGGTCAAACCGACTAGGAAAGCCCC
GCAGTTCGATAGGGAAGAGGCGGAAGATAGGGCGTACCGCCTGCTCAGCG
AAGGTGAGAGAGCAGAAGCTCTTGATATTTTTGCCTGCGTATGCAACGAT
CGTTCGTGTGTGGTTTGGTGTACGTACACGATCGCGCGCCCGCGGCCAAC
ATCGCGTACGCAGAGTCGGGCCTTGAGGGACCTTCTGCAAGCCGTCACCA
CGCCAGCCTCTTCCCTCCATGACATCTTTTTTTATCCATGCACACGTATT
GTCGCTGTCTTCCCCTTTGTGCCAACCGGAGACAAGGGTAGAGCGAAAGG
CGAACTTCGCCAAGTACAAAGGTGAAGCAAACTTGCTGGAACTTTCGCGT
ACTTCACCTTCTTTGTCGTGTAGAACACACTTTCGTGGTGGGAATAAGCA
CGGACGCACGGCCCATTCTCTGTCGCTGAGTAGGCAGTTCTTCCTTTTGT
CAAGCCCACCATCTCTCCAGTAGCCATATCAAGTTTAGTGCGGATGAACA
GCAGCGGCAGTGGCGGCTGTTGAGTGTTCGCAACGGGTGACAGGAATACC
GGTGTTGACGTAAGACTACGTATGTTGAATTGTTGATCCTACCCGTGGGC
CATCCCAGTAAACCCACAGCCGAGGTAAGGTAGTGTCCCTCTGTCAGCCC
GTCAGATAGATGCAATGCGTTTGTTGCCAGGGGTCTGTTTTGGGCATCCA
AATCGCTAACAGCCCCTTCAACAAGGTCTCGCGACGCATATCCCTCTCTC
CGCTTTTTCGTTCGTAAAAAGTTTGAGAAACACGAAAAATCACTCAAATC
CCTTTTTTTTGCACCTCGTGTGCACACACCCTCTCCCTCTCTCACTCGCT
CCCTCTGCTGATCGACGAGCGTAGATCCGCTTTGGACGACATGAAAAGGT
TCCCTATTCCTCCCAAGATGTGTCCGATAGTTCAGCACGCTTCGATGAAT
TGCTGGTCGCCTACATCATGAGGCAGACCTTAATCCTTCGTCAACTACCA
AGCCCTGGGGCAACATATTGGCGTGTGTGTTGAAGCCGCCGTTCCATCTT
GACAAGAATACTTACGAAAAGCACCTACTTTACTCCGTGAAAAATTGGCG
AGCACACAAAATGACGATCGAGGTTGGGCGAAAAACATCGTCCCCCATCG
TTGAGTTTGCTGCTTTCGTCCTTGTTGAAGACGAGGATTTTTGCGAAATC
CATTGTTCGGGGAGCCGGGAACAGATCGCAGCCCGTGATGAATTTTGAAC
ACGCACGACATTGTACAGAGCCAGTTTTGTGAGAGTCGTTTCAGTCGTTG
TTGTACTTTCGCCGGGGACTGTGGATGCTATTTTCAAACGTCACGGAGAG
AGCGCTTTCGGCATCATCGTGCATACGACGTTCGTTCGTGTGTTTCCTGT
TCTCTTCGTTAATGACAAGTCATCGCTGACTCATGAAAAGGTGCAAGTTT
GTAGCGCGGGCAGATGGAGAATGTTGATTGACGACTCTCACGCTTGAAAC
TAGATCCCACAGTTGTGATTGcAGTAGAAATATTTTGACGCAAcAGCGCT
TCGCGTGGATTGGCTCTGCCATGCGGCTCTGGTCGCTTACAGTGAATTGA
CCGCCGTTGAGGGGCAGTCCCATGGCAGTGCGAACAGAAAGACAGCGATC
CGCCCTCTGAAGTCCTTCCGTGTCACACACACATGCATTGCTGCCGCCAC
CGACGGCCGCATGCTGGAGGAGGTGCCTATGGAGGTGGCCACAACGGGTT
GTATCACATCTTCCTGTCTCTTCCTGCCTACGACGCCTTGTTTCTCCCTC
CCTGGCCCGGACGCCTGGAGTCGCGTTCGCGTGCTTCCTTGGTGGACAGT
ATATACATATGCGGCGGTGTGTGTGCTTTACTTGACGTGTCGAGCGACGG
ATTATTGGCAACATGGCCCTGATTGCGAAGTGGATTTATATCTCTCAAGT
GAGAAATGGCAACTGCGGCAGCACGCCAAGCATTTCTCTGTAGTGCAAGG
ATTGCGCGCCTGCACGGTCAAGACAACGATCTCACCCCTCATACGGCGCA
ACCTACCCGCCCCCCATGTAAGCCGTAAGCATCAAGCGGAACCGATCCCG
TATTTCTCGTTGTTGTCTCTGCTAATCGTTCCGGTCACACGCTCGCTCGC
GCTCTCTCAGGTCTACATTTGCCCTTTTTTACCCTCCTTCTCAATTCGTA
ATCCCCGTTTTTTTTGTGTGTGTCTCACAAGGGGAATTATTTTACGTCGA
GACGGACATCCCCGAGGACCTCCTCGTCCCCAACCGCCATGACCACGGAC
ACGTCGGCGGGGTCTCCCTCGAGATCATCACCGCCGCCAGGGCGCAGGGG
GGGGAGGGTCAGCAGCTGGCATCCCCCCCCTCGAAAGGCCCCGGCTCCGA
CTCGCCGTCGGCACACACAGCAGCTACCTCGCGGTCGTCCTCCCAGGACA
CAGAAGAGAACGACAGCAAGATGTGGCAGCAGCACGCACGCTCGCATCAT
GTATACCCATACCCGCAGCAACAGCAGCAGCAGCTCCCGTTCGCTGGCCT
CGGTGCGCGTGTGCTCGCCGTCAGCCCGGAGCCATTCTACCCCAACGGCA
ACCGCATCTCCCTGAGAGAGGCCCAGGAGTGGGATTTCCAAAAGAAGCTG
GAGGACATCGAGCTGAGCGAGACCCGGAACCGCCAGCGGTCGTTCTCGGA
GCCCCGGCTGACGTCCCTCCGCGCGGGGGGGGGGGCGAATCATGTCAACC
ACCTTGAGTGGCACAGCCCGCAGCAGTACCACCACCACTACCAGTGCCAA
GGAGCGAACGAGGGACGGCGCCGCGGCTCCGGCTCCGGCTCCGGCCGAAA
GCAGGTGTCGCCGACCCTTCAACGGCGGCGGTGGGACGATGACAACTGTG
GGGGTGGTGGCGGCGGTGGGGGTGATCCTTGCGCAGAAGCGTGCGAGGGG
CTTAGAGACGGGCTCGAGCGCGCATGGTCGCGGATCCTGGGGAGCCTGGG
CGGAGGCCGGGGAGGGGAGGGGGCCTGGGTAGGGAACCACGGCATCGGTA
CACTGCGGTCGAGGTCGCCGACCAGGGTGAAGAGCGTTTGCCGCAACTTC
GCCTCGTGCACGTCGACCAAGACTTACGAGATGACCCCTGCCTACAAGGA
GGCGCTGCAGAGGCTGGGCGTGCCCCCCCAGACGTCCACTTTCACCATGC
ACATCGCGGGTTACAGGTGAAGAGACGGAGGGAGGGGAGAGGGATGAAAG
AGGAAACGGGCTGCCACCTCTGTTGCTGAAGGCAAAACTGAGCTTGAAAA
GTTGGCTTTGAAAGAGTTTTGACGTGCATGCTGACTTCGATTCTCTGGAA
AACCGCAGGGTGGATGAACTGGCAAAATGTAGAATCCCGTTTTTAACGAA
ACCTTCACACGGATTCCCTTGGGAAGGTGGACAAAGATTTGGGCAAAAGA
AACTATTAGTAGAACTAGATCCTTACCGTCGGAAAAGTTTTTCTTGTGTT
GTGAAAAAAGCGGCAGAAAAGGCCTCGTGATGTGAGACAAAGGTTACGGA
GATGTGCGCTCGCATTTGTGTTCGAACCCTCGCCGTCCTCTGAAGGGATG
TTGTCCAGAGAAGCTGCGAGTGCGAACGCCGTGAATTCACCACGTGCACA
ACGGACGGAGATTTCGTCGAACTGTTTTCGAGGCTTTTTTTTTGCGTGGT
AATCGTATCAGAAGGGCACGCATGTAACCCCCCCCCCCAATGGTTTTGGT
GTAGCTCCGTCGCTGCCTCGCGCATCTGAGCAACCTTGCATGTGTCTGAT
GTATCTCTCTCTCTCTCTCTCCAGGCTGGTGTCCACGATCCTAGGGGACC
ACGCCGAGTACGAGGTCCGCATGAAGGGTGGCGGCCGCCACTGGAGCCGG
TGGCACCGCTTCTCGAGGTTCAAGACCATCGCCGGGTGCTCTCGCGGAGA
CCCTGACGCCGCCGCGGCGTGGCTGTCCGTCCTCCGGGCGAAGCCGCACT
ACCGGTGCCTCAAGCCGGACTACCTGGCGCTCAAGTGCAACCTGCTCGAA
GTGGTGAGAGAACGAGAGAGCGTCTGAGAGCCCCTGCCGGTATTCAGTTT
CGATGAGTCGGCGAAATGGGTGCGTGGTGCGTAGATATTGCGCACGATTG
CTCAATCGCTGGTGGTGGATGAGGATATTCGGTGGCGGAGAGAAAAGAAA
CGCAAAACAAAAACTCCTAATGAATTAAGTTGTTGGGGCTCGGGCTAGAC
GCTCATCGCTCACCACTTCCTTCTCCCCACCACCTCCGTCCCCCCCCCGT
AAATACTGCAGTTTCTGCAGCAGGTCCTGTTCGCAATGCCTACTCCGGCC
ATCCTGATCCACTTCGTCAGCGCTAAGTAGAGAGATAACGCAAGTAGATT
TGGCCTCTGACACCTCACATCAGCCGGGACCATGGAGTTCAAGCCATCCG
TCGGAGGTGGTGGGCCAGGCTTGGCGAGACGAGCGGGAGTTGCGAAGCAG
CCACCAAGCACTGGCTTGAAGGTGCCATGTCTGCCCGCGTCGTCCGCTCC
GCCTCACACTTCTTCCGCCCACCCTGCTCAGTCGCTACTACATCGAAGCG
GTCGCTCTGGGGCAGCAGAACACGGCGGCTTTTCGTCATGTTTCGTAGGC
GCGACGCGGTTGATTTTTGAGTTTCGATCGCGCATGGAGACGGGACGAGT
GACGTAACGAGGATAAGGATGGGAGAAGCGGCGACGCCTCCCGCCTCGTG
TTTGTTGAATAATTGGGGTTACGAATTTGTGTAGGCGGAGAATGAACATT
GGACGCGCTAGCGAGGAAGGAGAGCGATCCTTCCACTTTTTTCTCGTGCT
CATGCGCCCCCCGGCAAGCTGCCGCCGCCGCCGCCGCCGCCGCTGCTGCT
GCTGCTGCTGTTGCTACTGTTGTGTCAGACTCACTGTACATAAAAGTAGA
TTGTCAGAGCCGAGAGGCGCTCGAATTTGAAGGCTACGTCCACGTTTTGA
GTCGATTCATGAGGGGCGAAGACGGGCGGTTTGTGCGCTTTCTCCCCCTC
GGGGTTCCGGGTGTGGTATGGCTTGGTGCATCTCTTCTTTTCCCTGCCGT
GAGAGGAGCTCTGGTGGTGACAAGTGCGGCGAAAAAACGATTGATTTTGA
GAGGGAGAGCTGAGCCGGGCGTTCCTGTTTTTATGCCGCTTCAAGTCGCC
TGACGAAGGGAAATGAGAAAGAGTATTGGAAATTCAATAGAAGCATAAAA
CTAAGAAAAAACAGCCGAGACGAAGAATTTCTTCGCGTTGCGTAATGGGG
CGGCGATAGACAGGAAGGGTACAATTGTTTACGTTGATAGACGTGCAGAG
AAGGCATCTCGGAGACGGAGAAAGGGTGTTGCCAAGTTTGGTGGGAGGTG
AAGGGAGGTGAAGTCGCGGGGCTCGCACCCCCTCACTTCAGCGGGTGCAG
CCTGCCGTCAGTTCCCATGAACAACCAAGAGTGCTGACTGCTCGCAGAAA
AGTTGGAAAGCAAGTTTATTTTTTGCCCTTGGTCCTTGGGTGTGTGTGTG
CGTGATGTGTTTGCGTTCTAGTAGCTGTTTCATCTTTTCCTGTCAAGGTC
GCATCTCGCATTGTTTGGCCACGAGTCCGTCACTGTTTCGTACCTACCAG
GTAGAGTTTTCGACGAAAGGACATGTGCAACTTTTTTCAGCCTCGAGAGA
ACAGATGGTCGGATCCTTCGTCGTGGGCAGCGCGAACATGTATGACTCTG
GGTGGTGATGTGATACGATTATTGGTAATTGCGCACAGCAAATCTTACAG
GAACGCGTGCGCCTTCCCTCAAGCGTACAATGGGTCAAATCCTTCTTCGG
TTCTGACTCGCAGAGCGTGCGGCGGGTCTTGAGAGGTACACGTCAAAGGG
CGGTGATGCTGCCGTGGTCGGCGACGAAAAATTGAATCTGACATTTACCA
TTTAGCGAAGGAAGGCTGGGCGCTTGGCGGCAGGACACTATTTACGTCGA
ATTTGAGGCCTGCTAGACGTGCTGAATGCTCGCATTTTTCGGTTTATTTT
CTGTGGGCGGGGAGGAGGCTAGAGTGTAAAAAAAAATTACAACCGAAGGA
GCGGAAGAAATTCGAAGACGAATTATTGTTCAGGTTGCGGGGGGGGTGCG
TGAAGTGCATCAGTCTTTTTACTTGGCTGCATCAACTCCCGCCTTGTTTC
TTGTTTCAATGCACTCCACGAAGGATTCGCGGATGAAAGCTCTCATCTCG
AGAATTTTGTCTTCAAAGCTATTTCTTCGTGGGATATTTGGTGCGTGCAC
CTTAGTATAGCACTACCCGGCAGCTGAACGCCGTGTCTTCACATGACTTC
TGGTGCTTCTTTATGCGTGCCGTGTGTGGTCCTTTTCTCGGAACCCGTTC
ATCACCTTTCCTTTGTGTGTTTGATCTTGCTTAGTGAAATCGTGCAGTCT
TCTTCGCCTTGTGAGGGGCGGGACTGTCGGGGAAGGATCGTTCATATTCC
CCGTGGGGATAGAATACATGCGGCGGCCGTGTTGGGCGCTGACGTCATGG
AGTCGCAACACGACCAAATGAAAATATTTAGTGAAAAAGACTAGAAAACA
CGACAACAGAAAGGTGCTGCTGGGTTGTTCCACGAGATCTTACCTCGTCC
TAGGCTGGTGAAAAGGCTCAAAGTCGAGGCGTCGGCGGCTTTGCTTGTTA
TTCTCCACGGTATTGATGTCTGATCACCAAGGTATTGATGTCTGATCACC
AAGGTATTGATGTCTGATCACCAAGGGCGGCGACGGTAACGCGCAACACT
CTGGG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig1:4666573..4673427+ >mRNA_P-fluviatile_contig1.412.1 ID=mRNA_P-fluviatile_contig1.412.1|Name=mRNA_P-fluviatile_contig1.412.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2532bp|location=Sequence derived from alignment at P-fluviatile_contig1:4666573..4673427+ (Porterinema fluviatile SAG_2381) ATGGCGCTCGCGGGGGTCAAACCGACTAGGAAAGCCCCGCAGTTCGATAG GGAAGAGGCGGAAGATAGGGCGTACCGCCTGCTCAGCGAAGATGGCGCTC GCGGGGGTCAAACCGACTAGGAAAGCCCCGCAGTTCGATAGGGAAGAGGC GGAAGATAGGGCGTACCGCCTGCTCAGCGAAGGGGAATTATTTTACGTCG AGACGGACATCCCCGAGGACCTCCTCGTCCCCAACCGCCATGACCACGGA CACGTCGGCGGGGTCTCCCTCGAGATCATCACCGCCGCCAGGGCGCAGGG GGGGGAGGGTCAGCAGCTGGCATCCCCCCCCTCGAAAGGCCCCGGCTCCG ACTCGCCGTCGGCACACACAGCAGCTACCTCGCGGTCGTCCTCCCAGGAC ACAGAAGAGAACGACAGCAAGATGTGGCAGCAGCACGCACGCTCGCATCA TGTATACCCATACCCGCAGCAACAGCAGCAGCAGCTCCCGTTCGCTGGCC TCGGTGCGCGTGTGCTCGCCGTCAGCCCGGAGCCATTCTACCCCAACGGC AACCGCATCTCCCTGAGAGAGGCCCAGGAGTGGGATTTCCAAAAGAAGCT GGAGGACATCGAGCTGAGCGAGACCCGGAACCGCCAGCGGTCGTTCTCGG AGCCCCGGCTGACGTCCCTCCGCGCGGGGGGGGGGGCGAATCATGGGAAT TATTTTACGTCGAGACGGACATCCCCGAGGACCTCCTCGTCCCCAACCGC CATGACCACGGACACGTCGGCGGGGTCTCCCTCGAGATCATCACCGCCGC CAGGGCGCAGGGGGGGGAGGGTCAGCAGCTGGCATCCCCCCCCTCGAAAG GCCCCGGCTCCGACTCGCCGTCGGCACACACAGCAGCTACCTCGCGGTCG TCCTCCCAGGACACAGAAGAGAACGACAGCAAGATGTGGCAGCAGCACGC ACGCTCGCATCATGTATACCCATACCCGCAGCAACAGCAGCAGCAGCTCC CGTTCGCTGGCCTCGGTGCGCGTGTGCTCGCCGTCAGCCCGGAGCCATTC TACCCCAACGGCAACCGCATCTCCCTGAGAGAGGCCCAGGAGTGGGATTT CCAAAAGAAGCTGGAGGACATCGAGCTGAGCGAGACCCGGAACCGCCAGC GGTCGTTCTCGGAGCCCCGGCTGACGTCCCTCCGCGCGGGGGGGGGGGCG AATCATCAGGTGTCGCCGACCCTTCAACGGCGGCGGTGGGACGATGACAA CTGTGGGGGTGGTGGCGGCGGTGGGGGTGATCCTTGCGCAGAAGCGTGCG AGGGGCTTAGAGACGGGCTCGAGCGCGCATGGTCGCGGATCCTGGGGAGC CTGGGCGGAGGCCGGGGAGGGGAGGGGGCCTGGGTAGGGAACCACGGCAT CGGTACACTGCGGTCGAGGTCGCCGACCAGGGTGAAGAGCGTTTGCCGCA ACTTCGCCTCGTGCACGTCGACCAAGACTTACGAGATGACCCCTGCCTAC AAGGAGGCGCTGCAGAGGCTGGGCGTGCCCCCCCAGACGTCCACTTTCAC CATGCACATCGCGGGTTACAGCAGGTGTCGCCGACCCTTCAACGGCGGCG GTGGGACGATGACAACTGTGGGGGTGGTGGCGGCGGTGGGGGTGATCCTT GCGCAGAAGCGTGCGAGGGGCTTAGAGACGGGCTCGAGCGCGCATGGTCG CGGATCCTGGGGAGCCTGGGCGGAGGCCGGGGAGGGGAGGGGGCCTGGGT AGGGAACCACGGCATCGGTACACTGCGGTCGAGGTCGCCGACCAGGGTGA AGAGCGTTTGCCGCAACTTCGCCTCGTGCACGTCGACCAAGACTTACGAG ATGACCCCTGCCTACAAGGAGGCGCTGCAGAGGCTGGGCGTGCCCCCCCA GACGTCCACTTTCACCATGCACATCGCGGGTTACAGGCTGGTGTCCACGA TCCTAGGGGACCACGCCGAGTACGAGGTCCGCATGAAGGGTGGCGGCCGC CACTGGAGCCGGTGGCACCGCTTCTCGAGGTTCAAGACCATCGCCGGGTG CTCTCGCGGAGACCCTGACGCCGCCGCGGCGTGGCTGTCCGTCCTCCGGG CGAAGCCGCACTACCGGTGCCTCAAGCCGGACTACCTGGCGCTCAAGTGC AACCTGCTCGAAGTGGCTGGTGTCCACGATCCTAGGGGACCACGCCGAGT ACGAGGTCCGCATGAAGGGTGGCGGCCGCCACTGGAGCCGGTGGCACCGC TTCTCGAGGTTCAAGACCATCGCCGGGTGCTCTCGCGGAGACCCTGACGC CGCCGCGGCGTGGCTGTCCGTCCTCCGGGCGAAGCCGCACTACCGGTGCC TCAAGCCGGACTACCTGGCGCTCAAGTGCAACCTGCTCGAAGTGTTTCTG CAGCAGGTCCTGTTCGCAATGCCTACTCCGGCCATCCTGATCCACTTCGT CAGCGCTAAGTAGTTTCTGCAGCAGGTCCTGTTCGCAATGCCTACTCCGG CCATCCTGATCCACTTCGTCAGCGCTAAGTAG back to top
|