prot_P-fluviatile_contig1.400.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.400.1
Unique Nameprot_P-fluviatile_contig1.400.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length102
Homology
BLAST of mRNA_P-fluviatile_contig1.400.1 vs. uniprot
Match: A0A7S0PQ95_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PQ95_MICPS)

HSP 1 Score: 70.5 bits (171), Expect = 1.450e-12
Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    2 GLPRLVRLLRSHEAHVCGGAAGAIQNLSREEKSRSLLLNSSGAVESLADLLV-GRHVESQISAAGALVNIVGPDVQ 76
            G+P LVRLL   +  VCG AAGA QN+SRE  SR+L     GAV +L  LL  GR   +Q  AAGAL+NI+GPD++
Sbjct:  131 GVPHLVRLLSDDDDGVCGSAAGATQNVSRERASRALFRRG-GAVHALTKLLARGRDPATQARAAGALLNILGPDLE 205          
BLAST of mRNA_P-fluviatile_contig1.400.1 vs. uniprot
Match: A0A7S0IGD7_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IGD7_MICPS)

HSP 1 Score: 65.9 bits (159), Expect = 2.120e-10
Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query:    2 GLPRLVRLLRSHEAHVCGGAAGAIQNLSREEKSRSLLLNSSGAVESLADLLV-GRHVESQISAAGALVNIVGPDV 75
            G+P LVR L   +  VCG AAGA QN+SRE  SR+L     GAVE+L  LL  G    +Q  AAGAL+NI+GPD+
Sbjct:  275 GIPHLVRALGDVDDGVCGSAAGATQNVSRERASRALFRRG-GAVEALTKLLARGCDPATQARAAGALLNILGPDL 348          
BLAST of mRNA_P-fluviatile_contig1.400.1 vs. uniprot
Match: A0A7S2TW83_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TW83_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 1.850e-9
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0
Query:    1 GGLPRLVRLLRSHEAHVCGGAAGAIQNLSREEKSRSLLLNSSGAVESLADL-LVGRHVESQISAAGALVNIVGPDV----QGSKRR-LLQSVLTDGIVLGVIESCM 100
            G +  L  LL S  A   G AAG IQNLSR  K+R LLL    AV  L+ L L   H+ +Q++A  AL N++ P +     G KRR LL++VL+D + LG+I S +
Sbjct:  228 GAVESLCSLLCSCHAEETGYAAGVIQNLSRHNKARILLLKGQ-AVSLLSRLALTSTHLPAQVAAVCALCNLLSPGLGTGFSGFKRRRLLKNVLSDALALGIIGSAL 332          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S0PQ95_MICPS1.450e-1253.95Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S0IGD7_MICPS2.120e-1053.33Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S2TW83_9EUKA1.850e-943.40Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloPFAMPF00514Armcoord: 1..30
e-value: 4.3E-6
score: 26.6
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 1..43
score: 14.892
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..99
e-value: 2.4E-13
score: 52.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4601390..4602322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.400.1mRNA_P-fluviatile_contig1.400.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4601390..4602322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.400.1 ID=prot_P-fluviatile_contig1.400.1|Name=mRNA_P-fluviatile_contig1.400.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=102bp
GGLPRLVRLLRSHEAHVCGGAAGAIQNLSREEKSRSLLLNSSGAVESLAD
LLVGRHVESQISAAGALVNIVGPDVQGSKRRLLQSVLTDGIVLGVIESCM
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold