mRNA_P-fluviatile_contig20.4399.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5KJB5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB5_9PHAE) HSP 1 Score: 277 bits (708), Expect = 1.180e-83 Identity = 154/224 (68.75%), Postives = 164/224 (73.21%), Query Frame = 3
Query: 876 QLAKSLNIHLVRLPSHMSHVTQPLDVAGFGCFKTELTTAIAAFPSKHGGALPQKRDMAGLIGQAWSTSFTPEINKASFAGAGLWPVDKERALTRLQRPKMKAREADRLPCRTSPSS*ATN------GWRSCWTSAASAR--PGQKATPSREFA*ARCFSALTCPTTAPRNKRQRGRIWAFQTEDSSLMKSGWRGKRKKNANCRLPRPLRRQRPWRGIRHEMRGG 1523
QLAKSLN HL +LPSHMSHVTQPLDVA FGCFK ELTTAIA FPSKHGGALP+KRDMAGLIGQAWS +FTPEINKASFAGAGLWPVDKERALTRLQRPK KAREADR + P + G R + A PG + + L P P+ KRQRGR WAFQTEDSSLMK GWRGKR K+ANCRLPRPLRRQRPWRG RHE RGG
Sbjct: 279 QLAKSLNTHLEQLPSHMSHVTQPLDVASFGCFK-ELTTAIAVFPSKHGGALPRKRDMAGLIGQAWSMTFTPEINKASFAGAGLWPVDKERALTRLQRPKRKAREADRPSLQDVPIVVSNEQLEELLGERGVHKARAEGHTIPGVRVST--------VLLGLYLPNNRPKKKRQRGRSWAFQTEDSSLMKKGWRGKRTKHANCRLPRPLRRQRPWRGKRHETRGG 493
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5JDM3_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM3_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.780e-70 Identity = 135/200 (67.50%), Postives = 141/200 (70.50%), Query Frame = 3
Query: 879 LAKSLNIHLVRLPSHMSHVTQPLDVAGFGCFKTELTTAIAAFPSKHGGALPQKRDMAGLIGQAWSTSFTPEINKASFAGAGLWPVDKERALTRLQRPKMKAREADRLPCRTSPSS*ATN------GWRSCWTSAASAR--PGQKATPSREFA*ARCFSALTCPTTAPRNKRQRGRIWAFQTEDSSLMKSGWRGKRKKNAN 1454
LAKSLNIHLV+LPS MSHVTQPLDVAGFGCFK ELTTAIAAFPSKHGGAL +KRDMAGLIGQAWSTSFTPEINKASFAGAGLWP DKERALTRLQRPK KAREADR + P G R + A PG + + P PR KRQRGR WAFQTEDSSLMKSGWRGK K AN
Sbjct: 46 LAKSLNIHLVQLPSDMSHVTQPLDVAGFGCFKKELTTAIAAFPSKHGGALARKRDMAGLIGQAWSTSFTPEINKASFAGAGLWPGDKERALTRLQRPKRKAREADRSSLQDVPIVVRNEQLEELLGERGVRKARAEGHTIPGIRVST--------VLLGPYLPNNRPRKKRQRGRTWAFQTEDSSLMKSGWRGKGGKYAN 237
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5JS97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS97_9PHAE) HSP 1 Score: 234 bits (597), Expect = 8.740e-66 Identity = 178/406 (43.84%), Postives = 217/406 (53.45%), Query Frame = 3
Query: 48 CEAVRSGSLSRKAAAAAFGVNRTSLLRRLSRECAMDAKIGHGTVLTKAEEDAMEDVLLCAGRNSRSV*DISSATTVGRSRGTRTRARGRPGSLISSDGTSVSAFDSPASMRLTG*PLRIMSVCTSFTTGSSSSTSKSRSPTTFGTRKSQYRFRWYH---SRHAGRAGLRGEGAAGGPPDACQLARKLHDRHXXXXXXXXAGPCHHLERPTFQRRLDRG*EGSAGC------------DVHLHGIV-LHMR*RLHQARQELPRAARPAWLARREKTPRARAGWARVAREL*SHQLAKSLNIHLVRLPSHMSHVTQPLDVAGFGCFKTELTTAIAAFPSKHGGALPQKRDMAGLIGQAWSTSFTPEINKASFAGAGLWPVDKERALTRLQRPKMKAREADRLPCRTSP 1217
CEAVRSG +S+ AAAAAFG+ R+SL RRL CAMDA++G GTV+TKAEEDA++ +LL AGRN I T R +R GRP S G R G R+ + S SS + + ++R H + +G AGL G GAAGGP DA A P + F +G G DV + I+ H Q R+ +P L + V+ E+ +LA+SLNIHLV+LPSHMSH+TQPLDVAGFGCFK ELT AI AFP+ HGGALP+KRDMA +IGQAWSTSFTP+INKASFAGAGLWPVDKERAL+RL +PK K RE DR P + P
Sbjct: 29 CEAVRSGRMSQNAAAAAFGLGRSSLQRRLDGNCAMDARVGPGTVMTKAEEDAVKYLLLYAGRNF-----IPLTTADLTERVSRLCNDGRPIPWNSDKGPGKDWLKGFLG-RHEGISHRLARIYESNRVTSSEDERLHKFYGFWAEFLGEHRPAADHIWNTDESGTAGLCGTGAAGGPADAFHFAENCTIVTTINAAGAVLAPTIIFKGQRFNEDWIVDQDGPPGATYTCTESSFMCGDVFIKYIMDFH-----EQLRKRNLLDGKPHVLVLDGHA-------SHVSLEV--VELARSLNIHLVQLPSHMSHITQPLDVAGFGCFKKELTKAIQAFPATHGGALPRKRDMASVIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRLLKPKRKERETDRPPLQDVP 414
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5JR11_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR11_9PHAE) HSP 1 Score: 221 bits (564), Expect = 5.450e-65 Identity = 107/123 (86.99%), Postives = 112/123 (91.06%), Query Frame = 1
Query: 505 GGTIQGTQGGRVFAEKGQPVVPQMRANSRENCTIVTTINAGGAVLDPAIILKGQRFNGDWIADRKGPPGATYTCTESSFICGDVFIKHVKNFHEQLGRRGLLDGKKPHVLVLDGHASHVSFEV 873
GGTIQGTQ RVFAE+GQPVVPQMRANSRENCTIVTTINA GAVLDP +I KG RFN DWIADR GPPGATYTCTESSF+CGDVFIK++KNFHEQL RR LLDGK PHVLVLDGHASHVSFEV
Sbjct: 108 GGTIQGTQTQRVFAEQGQPVVPQMRANSRENCTIVTTINAAGAVLDPTVIFKGVRFNQDWIADRNGPPGATYTCTESSFMCGDVFIKYIKNFHEQLRRRNLLDGK-PHVLVLDGHASHVSFEV 229
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5KWY0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWY0_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.150e-60 Identity = 133/240 (55.42%), Postives = 150/240 (62.50%), Query Frame = 3
Query: 876 QLAKSLNIHLVRLPSHMSHVTQPLDVAGFGCFKTELTTAIAAFPSKHGGALPQKRDMAGLIGQAWSTSFTPEINKASFAGAGLWPVDKERALTRLQRPKMKAREADRLPCRTSPSS*ATN------GWRSCWTSAASAR--PGQKATPSREFA*ARCFSALTCPTTAPRNKRQRGRIWAFQTEDSSLMKSGWRGKRK-KNANCRLPRPLRRQRPWRGIRHEMRGGQNRRRGNVNRTAGGG 1568
QLAKSLNIHLV+LPSHMSHVT PLDVAGFGCFK E+ TAIAAFPSKHGGALP+KRD AGLIGQAWSTSFTPEIN+ASFAGAGLWPVDKERALT LQRPK KAREADR + P + G R + A PG + + P P+ K R + L W +++ K + + RPWRG R E RGGQ+RRRGNVNRTA GG
Sbjct: 45 QLAKSLNIHLVQLPSHMSHVTLPLDVAGFGCFKKEVATAIAAFPSKHGGALPRKRDKAGLIGQAWSTSFTPEINQASFAGAGLWPVDKERALTLLQRPKRKAREADRPSLQDVPIVVSNEQLEELLGERGVHKARAEGHTIPGIRVST--------VLLGPYLPNNRPKKKTPT-RANLGIPDGGLLTDEEWMARQEEKERELQAAEAAKTVRPWRGKRDESRGGQSRRRGNVNRTAAGG 275
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5JKT2_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKT2_9PHAE) HSP 1 Score: 210 bits (535), Expect = 2.080e-60 Identity = 102/136 (75.00%), Postives = 114/136 (83.82%), Query Frame = 1
Query: 466 RPRLEHGRVSTVLGGTIQGTQGGRVFAEKGQPVVPQMRANSRENCTIVTTINAGGAVLDPAIILKGQRFNGDWIADRKGPPGATYTCTESSFICGDVFIKHVKNFHEQLGRRGLLDGKKPHVLVLDGHASHVSFEV 873
RP +H + GGTIQG QG +V+AE+GQPVVPQMR+ SRENCTIVTTINA GAVL P II KGQRFNGDWI D+ GPPGATYTCTESSF+CGDVFIK++ +FHEQL +R LLDGK PHVLVLDGHASHVS EV
Sbjct: 101 RPAADHIWNTDESGGTIQGAQGQQVYAERGQPVVPQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFNGDWIVDQDGPPGATYTCTESSFMCGDVFIKYIMDFHEQLRKRNLLDGK-PHVLVLDGHASHVSLEV 235
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5KH00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH00_9PHAE) HSP 1 Score: 209 bits (532), Expect = 1.900e-57 Identity = 98/124 (79.03%), Postives = 110/124 (88.71%), Query Frame = 1
Query: 502 LGGTIQGTQGGRVFAEKGQPVVPQMRANSRENCTIVTTINAGGAVLDPAIILKGQRFNGDWIADRKGPPGATYTCTESSFICGDVFIKHVKNFHEQLGRRGLLDGKKPHVLVLDGHASHVSFEV 873
+GGTIQG QG +V+AE+GQPVVPQMR+ SRENCTI+TTINA GAVL P II KGQRFNGDWI D+ GPPGATYTCTESSF+CGDVFIK++ +FHEQL +R LLDGK PHVLVLDGHASHVS EV
Sbjct: 97 VGGTIQGAQGQQVYAERGQPVVPQMRSTSRENCTIITTINAAGAVLAPTIIFKGQRFNGDWIVDQDGPPGATYTCTESSFMCGDVFIKYIMDFHEQLRKRNLLDGK-PHVLVLDGHASHVSLEV 219
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5JR26_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR26_9PHAE) HSP 1 Score: 201 bits (512), Expect = 4.730e-57 Identity = 98/135 (72.59%), Postives = 110/135 (81.48%), Query Frame = 1
Query: 469 PRLEHGRVSTVLGGTIQGTQGGRVFAEKGQPVVPQMRANSRENCTIVTTINAGGAVLDPAIILKGQRFNGDWIADRKGPPGATYTCTESSFICGDVFIKHVKNFHEQLGRRGLLDGKKPHVLVLDGHASHVSFEV 873
P +H + GGT+QGTQG RV AE+GQPVV QMR+ SREN TIVTTINA GAVL P II KGQRFNGDW+AD GPPGA Y CTESSF+CGDVFIK+++NFH+QLG R LLDGK PHVLVLDGHASHVS +V
Sbjct: 98 PAADHVWNTDESGGTVQGTQGQRVVAERGQPVVAQMRSTSRENVTIVTTINAAGAVLAPTIIFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGDVFIKYIQNFHKQLGERNLLDGK-PHVLVLDGHASHVSLDV 231
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 207 bits (526), Expect = 6.040e-57 Identity = 161/410 (39.27%), Postives = 211/410 (51.46%), Query Frame = 3
Query: 48 CEAVRSGSLSRKAAAAAFGVNRTSLLRRLSRECAMDAKIGHGTVLTKAEEDAMEDVLLCAGRNSRSV*DISSATTVGRSRGTRTRARGRPGSLISSDGTSVSAFDSPASMRLTG*PLRIMSVCTSFTTGSSSSTSKSRSPTTFGTRKSQYRFRWYHSRHAGRAGLRGEGAAG-------GPPDACQLARKLHDRHXXXXXXXXAGPCHHLERPTFQRRLDRG*EGSAGCDVHLHG------------------IVLHMR*RLHQARQELPRAARPAWLARREKTPRARAGWARVAREL*SHQLAKSLNIHLVRLPSHMSHVTQPLDVAGFGCFKTELTTAIAAFPSKHGGALPQKRDMAGLIGQAWSTSFTPEINKASFAGAGLWPVDKERALTRLQRPKMKAREADRLP 1202
CEAVRSGS+S AAAAA+G+++TSL RRLS ECA+DA++G GTV+T AEEDA+EDVLL AGRN +++A R R R P + G S R++ LR+ + S S+ + +G +++ H + +G +G G G P Q+ + AG + PT + +G + L+G + +++ Q +P L L +LA SLNIHLV+LPSHMSH+TQPLDVAGFGCFK EL I AFP+++GGALP+KRDMAG+IG AW +SFTPEINKASFAGAGLWPVD+ERAL+RL RPK K E DR P
Sbjct: 29 CEAVRSGSMSGNAAAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRN---FIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERIS---LRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGA---VLAPTI---IFKGQRFNGDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHV---------TLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRLLRPKRKVTETDRPP 417
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Match: A0A6H5JRL2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL2_9PHAE) HSP 1 Score: 197 bits (501), Expect = 1.730e-55 Identity = 93/123 (75.61%), Postives = 104/123 (84.55%), Query Frame = 1
Query: 505 GGTIQGTQGGRVFAEKGQPVVPQMRANSRENCTIVTTINAGGAVLDPAIILKGQRFNGDWIADRKGPPGATYTCTESSFICGDVFIKHVKNFHEQLGRRGLLDGKKPHVLVLDGHASHVSFEV 873
GGT+QGTQG RV AE+GQPVV QMR+ SRENCTI+TTINA GAVL P I KGQRFNGDW+AD GPPGA CTESSF+CG+VFIK++KNFH+QLG R LLDGK PHVLVLDGH SHVS +V
Sbjct: 31 GGTVQGTQGQRVVAERGQPVVAQMRSTSRENCTIITTINAAGAVLAPTFIFKGQRFNGDWVADLNGPPGAFNDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGK-PHVLVLDGHTSHVSLDV 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig20.4399.1 >prot_P-fluviatile_contig20.4399.1 ID=prot_P-fluviatile_contig20.4399.1|Name=mRNA_P-fluviatile_contig20.4399.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=137bp MRANSRENCTIVTTINAGGAVLDPAIILKGQRFNGDWIADRKGPPGATYTback to top mRNA from alignment at P-fluviatile_contig20:2213283..2215513- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig20.4399.1 ID=mRNA_P-fluviatile_contig20.4399.1|Name=mRNA_P-fluviatile_contig20.4399.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2231bp|location=Sequence derived from alignment at P-fluviatile_contig20:2213283..2215513- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig20:2213283..2215513- >mRNA_P-fluviatile_contig20.4399.1 ID=mRNA_P-fluviatile_contig20.4399.1|Name=mRNA_P-fluviatile_contig20.4399.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=822bp|location=Sequence derived from alignment at P-fluviatile_contig20:2213283..2215513- (Porterinema fluviatile SAG_2381)back to top |