mRNA_P-fluviatile_contig1.397.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.397.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE) HSP 1 Score: 791 bits (2042), Expect = 7.870e-250 Identity = 616/1021 (60.33%), Postives = 679/1021 (66.50%), Query Frame = 3
Query: 96 KEVKLTAEEEELMKALRKYLRENHVKNVHSRLQGWRARVRKGSKYDKHTYLNPDRKEFKTKGEVLAALQVLDRGGFHQERQAISVSREEAIKRARELFEKKGIDLVGDRGEGAAPLPLSDLLVENLGSIDTRVGFHSSKTIFPPGYQAIRMVVDGRTLRAIKARCTIYVEDDAPAFRIDLEGSSVPEGEPTTFEAPTQKQCFQQVFSALGTLGGRAKESVLGGPQFFNVAVKALVEGMPGSSECENYVFTAMRGGAGGFPMFKKEAADSAAAAERAEEKMRSELEKTWWNGMPEAEKAKIRAADKHAR-VRKKDR--------EEDGGGLAGRKRKKVSSLGPPSKVKVKRESAADGPNSAXXXXXXXXXXXXXXXXXXXXXQKSKPATPRRRAE---KYDPLQNKRLQLQPAVSKEVQTFINAKRKEARGMVLGRFDAEQRGLMTDSGAVEDSLLDGYDDPWPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESRLVLPEGVLLKHAMQVWNALCVLPRPMGLRPPPTLDQLMRAIVTLSPRW--STGAEGXXXXXXXXXXXXHGVVSGGDVKGXXXXXXXXXXXXXXXXXXXXEGDAEGEAEFDDKKASIRVVRG-GKEGRRQGADERVGAGEGGSAEEEDDEAKKEAQALLDGVCMSIVRVLSIDLHAVLGSPCDQQRDKERESVAVEDVLVVNQMTWPELARQCIVANMTKEYLQMPDAEVTGWVRGSGRHWTTERPANILLRQRVERKGNPSAAAFVXXXXXXXXXXXXXXXAPVSPTGIMDGAREEAESEGGAEFXXXXXXSCKGGRANGDDREEEVESDSELPDALPAAHGGGANGVXXXXXXXXXXXXXXSVQERLKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKE---------NDETALRRRLHLLVEDETRPEVVRRCAVVLREIARHKLGGVFLFPMDRLQVPEYYSVIERPITVLSLLETLETWPNAAAASCG 3086
KE+KLTAEEEELMK LRKYLRE+H+KNV +L GW+ VRKGSKY +HTYLNPD +EFKTKGE GG+ E+A+++AR LFE KG L+G R GAAPLP++D+L+ENLG +DTR GFHSSKTIFPPGY+AIRMV+DGRTLRAI+ARC+IYVE+DAPAFRI+L+ SS+P G+ TTFEA TQK+CF QVF AL T G RAKESV GGPQFFN AVKAL+EGMP S EC+ YVF AMRG G PMFKK A D AAAERAEEKMR ELEK+WW GMPEAEKAKIRAADKH R VRKKDR XXXXXXXXXXXXXXXXXXXXX KP TPRRR E K DPL+ KR+QLQPAV+KEVQ+FI AKRKEARGM RGLMTDSGAVEDSLL+G+D PWPR XXXXXXXXXXXXXXXXXXXXX + RLVLPEGVLLKHA+QVWNALCV PRPMGLRPPPTLDQLMRAIV +SPRW S GAEG SG K + +GEAEFD+KKASIR G++GR+ G G EGG +EAKKEAQALLDGVCMSIVRVLSIDLH VLGSPCDQQ+DKERESVA+ +VLVVNQMTWPELARQCIVAN+ KEYL MPDAEVTGWVRG+ RHWT RP NILLRQRVE++GNP+AA A +P G + S+ XXXXXX XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NDET LRRRLH L EDE +PE VRRCAVVLREIARH+LGGVFLFPMDR+Q PEYY+VIE PITVLSLL+ LE W SCG
Sbjct: 455 KEIKLTAEEEELMKGLRKYLREHHIKNVQPKLVGWKPVVRKGSKYHQHTYLNPDGQEFKTKGEARHM------GGW-----------EDAVEQARILFEGKGTKLLGKREPGAAPLPVADILIENLGRVDTRFGFHSSKTIFPPGYRAIRMVMDGRTLRAIRARCSIYVENDAPAFRIELDESSIPPGKATTFEATTQKECFNQVFKALDTAGNRAKESVYGGPQFFNSAVKALIEGMPRSEECDKYVFAAMRG-RGTAPMFKKVAVDWQAAAERAEEKMRHELEKSWWTGMPEAEKAKIRAADKHGRGVRKKDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPTTPRRRVERGEKKDPLKEKRMQLQPAVAKEVQSFITAKRKEARGM---------RGLMTDSGAVEDSLLEGFDKPWPRPRYAATSATGPVEKDDGAAGVVGEEXXXXXXXXXXXXXXXXXXXXXKQ-RLVLPEGVLLKHAVQVWNALCVFPRPMGLRPPPTLDQLMRAIVMVSPRWQQSHGAEG----------------SGEGSK-----------------TEEERREEDGEAEFDEKKASIRAAAARGQQGRKGG----YGEEEGG------EEAKKEAQALLDGVCMSIVRVLSIDLHTVLGSPCDQQKDKERESVAMSEVLVVNQMTWPELARQCIVANLAKEYLHMPDAEVTGWVRGAERHWTAARPYNILLRQRVEQRGNPTAAVV----------------ATAAPAATSAGNAAVSSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDETVLRRRLHGLAEDEGKPEAVRRCAVVLREIARHRLGGVFLFPMDRMQSPEYYAVIEEPITVLSLLDFLEGW------SCG 1382
BLAST of mRNA_P-fluviatile_contig1.397.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI) HSP 1 Score: 370 bits (951), Expect = 3.160e-104 Identity = 278/526 (52.85%), Postives = 317/526 (60.27%), Query Frame = 3
Query: 96 KEVKLTAEEEELMKALRKYLRENHVKNVHSRLQGWRARVRKGSKYDKHTYLNPDRKEFKTKGEVLAALQVLDRGGFHQERQAISVSREEAIKRARELFEKKGIDLVGDRGEGAAPLPLSDLLVENLGSIDTRVGFHSSKTIFPPGYQAIRMVVDGRTLRAIKARCTIYVEDDAPAFRIDLEGSSVPEGEPTTFEAPTQKQCFQQVFSALGTLGGRAKESVLGGPQFFNVAVKALVEGMPGSSECENYVFTAMRGGAGGFPMFKKEAADSAAAAERAEEKMRSELEKTWWNGMPEAEKAKIRAADKHARV-RKKDREEDGGGLAGRKRKKVSSLGPPSKVKVKRESAADGPNSAXXXXXXXXXXXXXXXXXXXXXQK-----SKPATPRRRAE---KYDPLQNKRLQLQPAVSKEVQTFINAKRKEARGMVLGRFDAEQRGLMTDSGAVEDSLLDGYDDPWPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESRLVLPEGVLLKHAMQ 1646
KEVKLTAEEEELMK LRKYLRE+H+KNV +L GW+ VRKGSKY +HTYLNPD +EFKTKGEVLA + G F+QERQ + SRE+A+++AR LFE KG L+G R GAAPLP++D+L+ENLG +DTR GFHSSKTIFPPGY+AIRMV+DGRTLRAIKARC+IYVE+DAPAFRI+L+ SS+P G+ TTFEA TQK+CF QVF AL T G RAK AK+RAADKH R RKKDR+ XXXXXXXXXXXXXXXXXXXXX +P TPRRRAE K DPL+ KR+QLQPAV+KEVQ+FI AKRKEARGMVLGRFDAEQRGLMTDSGAVEDSLL+G+D PWPR XXXXXXXXXXX A+ R VLPEGVLLKHA+Q
Sbjct: 331 KEVKLTAEEEELMKGLRKYLREHHIKNVQLKLVGWKPVVRKGSKYHQHTYLNPDGQEFKTKGEVLAVFRAA--GDFNQERQ--TSSREDAVEQARILFEGKGTKLLGKREPGAAPLPVTDILLENLGRVDTRFGFHSSKTIFPPGYRAIRMVMDGRTLRAIKARCSIYVENDAPAFRIELDKSSIPPGKTTTFEATTQKECFNQVFKALDTAGNRAK--------------------------------------------------------------------------------AKMRAADKHGRGGRKKDRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQPTTPRRRAERVAKKDPLKEKRVQLQPAVAKEVQSFITAKRKEARGMVLGRFDAEQRGLMTDSGAVEDSLLEGFDKPWPRPRYAGAAAAGPVEKDGGAPGVVGEERRSPSEGSXXXXXXXXXXXA-AKQRFVLPEGVLLKHAVQ 771 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.397.1 >prot_P-fluviatile_contig1.397.1 ID=prot_P-fluviatile_contig1.397.1|Name=mRNA_P-fluviatile_contig1.397.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1030bp MGENKEGKGTGAGWQGAGAGAKAAGAKKEVKLTAEEEELMKALRKYLRENback to top mRNA from alignment at P-fluviatile_contig1:4574476..4584781- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.397.1 ID=mRNA_P-fluviatile_contig1.397.1|Name=mRNA_P-fluviatile_contig1.397.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10306bp|location=Sequence derived from alignment at P-fluviatile_contig1:4574476..4584781- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:4574476..4584781- >mRNA_P-fluviatile_contig1.397.1 ID=mRNA_P-fluviatile_contig1.397.1|Name=mRNA_P-fluviatile_contig1.397.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6180bp|location=Sequence derived from alignment at P-fluviatile_contig1:4574476..4584781- (Porterinema fluviatile SAG_2381)back to top |