prot_P-fluviatile_contig1.386.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.386.1
Unique Nameprot_P-fluviatile_contig1.386.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length178
Homology
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BLAST of mRNA_P-fluviatile_contig1.386.1 vs. uniprot
Match: A0A6H5KPN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPN3_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 4.630e-8
Identity = 65/179 (36.31%), Postives = 81/179 (45.25%), Query Frame = 0 
Query:    8 RRRRLASLAVTCVGLAQGRVPSATLGF-----------------AKEGCSRCDGRTPSPSA---LSDIPPGSGRAARVIFRC--STSGTEGSSVDSRTAGGGHTRSATGRLVTHGLTGGAVFPRNGHARKQQRPQPRLPKSNAATHTADYGNTERSAWPEVRRVFRRCLARAGSGGLQG 164
            RRRR   LA+T + L +G VPS  L                   AK     C+G   S       S +P  +G  +R        TS TE S  +  TA   HT  + GRLV  GL+GG +F      RK+++ Q RL        TA       SAWPE RRV +RCLARA SGG+ G
Sbjct:    8 RRRRAGFLALTWLCLVRGHVPSTLLDSGTGVEPSPRPVFTAAAGAKANLPSCNGGGRSSGRRVEFSSLPAATGLLSRGGGSSLDPTSVTEPSGKNGSTACLDHT--SHGRLVAAGLSGGELF-----HRKREQQQQRLQA------TAKTNGDATSAWPEARRVLKRCLARAASGGIPG 173
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KPN3_9PHAE4.630e-836.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..177
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4502877..4503639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.386.1mRNA_P-fluviatile_contig1.386.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 4502807..4509585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.386.1 ID=prot_P-fluviatile_contig1.386.1|Name=mRNA_P-fluviatile_contig1.386.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=178bp
MRDPHRSRRRRLASLAVTCVGLAQGRVPSATLGFAKEGCSRCDGRTPSPS
ALSDIPPGSGRAARVIFRCSTSGTEGSSVDSRTAGGGHTRSATGRLVTHG
LTGGAVFPRNGHARKQQRPQPRLPKSNAATHTADYGNTERSAWPEVRRVF
RRCLARAGSGGLQGRRLASCRSSPSCG*
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