mRNA_P-fluviatile_contig20.4347.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5JMR3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR3_9PHAE) HSP 1 Score: 373 bits (958), Expect = 3.750e-130 Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = -1
Query: 1 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 558
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDETS
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETS 186
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5JH77_9PHAE (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH77_9PHAE) HSP 1 Score: 369 bits (947), Expect = 1.830e-123 Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = -1
Query: 4 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 558
MWGIFA FGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET
Sbjct: 1 MWGIFAPFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDET 185
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5KQE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE4_9PHAE) HSP 1 Score: 372 bits (955), Expect = 1.660e-122 Identity = 181/186 (97.31%), Postives = 184/186 (98.92%), Query Frame = -1
Query: 1 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 558
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET+
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETT 186
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE) HSP 1 Score: 373 bits (958), Expect = 7.060e-122 Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = -1
Query: 1 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 558
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDETS
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETS 186
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5LAK0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAK0_9PHAE) HSP 1 Score: 337 bits (865), Expect = 1.090e-115 Identity = 164/170 (96.47%), Postives = 166/170 (97.65%), Query Frame = -1
Query: 1 RTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 510
R DPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDETS
Sbjct: 32 RVNQDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETS 201
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5JUK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK8_9PHAE) HSP 1 Score: 342 bits (878), Expect = 1.070e-112 Identity = 167/187 (89.30%), Postives = 174/187 (93.05%), Query Frame = -1
Query: 22 AHPSPTPLMWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERI 582
A PSPTPLMWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAA+TYGLPLASLHDRVK KVAIDA+VGPGTVLSKE EDFVEDVLIYASRHFLLLGRREL+DAVRN+CSDGRKVPW+PDKGPGDSWLEG M RHPGLSERATHI EAN INED E RL+AFY AWAEYL ETKLPPE +
Sbjct: 31 AQPSPTPLMWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAAKTYGLPLASLHDRVKKKVAIDAKVGPGTVLSKEGEDFVEDVLIYASRHFLLLGRRELKDAVRNICSDGRKVPWNPDKGPGDSWLEGVMTRHPGLSERATHINEANPINEDDERRLEAFYKAWAEYLAETKLPPEXV 217
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5JPC4_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC4_9PHAE) HSP 1 Score: 284 bits (726), Expect = 5.790e-95 Identity = 139/186 (74.73%), Postives = 155/186 (83.33%), Query Frame = -1
Query: 1 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 558
M G+FA+ G+LL SMGRTRVDPEQAQKAVDAVRSG+MS+R AA YGL SLH R+ NKVAIDA+V PGTVLSKEEE+FVEDVL+YASR LLLGRREL+DAVR +C DGRKV WDPDKGPGD WL+ F+ RHP L ERATHIYEANRINED E RL+AFY W YL ETKL +RI+NTDETS
Sbjct: 1 MRGVFAIVGLLLPSMGRTRVDPEQAQKAVDAVRSGQMSVRGAAEAYGLSRNSLHSRLTNKVAIDAKVAPGTVLSKEEEEFVEDVLVYASRRLLLLGRRELKDAVRKICLDGRKVRWDPDKGPGDRWLQWFLKRHPELPERATHIYEANRINEDDESRLEAFYETWDAYLSETKLTSDRIMNTDETS 186
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5L2N3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N3_9PHAE) HSP 1 Score: 274 bits (701), Expect = 7.180e-92 Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = -1
Query: 151 MWGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPG 558
MWGIFALFGVLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPG
Sbjct: 1 MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPG 136
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5K5E3_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E3_9PHAE) HSP 1 Score: 272 bits (696), Expect = 1.450e-88 Identity = 158/276 (57.25%), Postives = 167/276 (60.51%), Query Frame = -1
Query: 1 KHSRDTAHPSPTPLM---WGIFALFGVLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEG-------------------------------------------------------------------------FMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETS 600
K+S H L+ WG A G R RVDPEQAQK VDAVRSG+MSLRVAA+TY LPLASLHDRVK +VAIDA VGPGTVLSKEEE FVEDVLIYASRHFLL GRREL+ AVRN+CSDGRKVPW+P KGPGDSWLEG FMARHPGLSERATHIYEANRINED EPRL+AFY A AEYL ETKLPPERILNTDETS
Sbjct: 40 KYSTALTHTPDVGLLCPFWGPAAKHGTY---ESRPRVDPEQAQKTVDAVRSGQMSLRVAAKTYRLPLASLHDRVKKEVAIDASVGPGTVLSKEEEGFVEDVLIYASRHFLLSGRRELKYAVRNICSDGRKVPWNPAKGPGDSWLEGXKKEVAIDASVGPGTVLSKEEEGFVEDVLIYASRHFLLSGRRELKYAVRNICSDGRKVPWNPAKGPGDSWLEGFMARHPGLSERATHIYEANRINEDDEPRLEAFYKARAEYLAETKLPPERILNTDETS 312
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Match: A0A6H5KK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK08_9PHAE) HSP 1 Score: 262 bits (670), Expect = 2.190e-83 Identity = 128/158 (81.01%), Postives = 137/158 (86.71%), Query Frame = -1
Query: 43 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEET 516
MGR RVDPE+AQKA+DAVRSGEMS RVAA TYGL SLH RVK +VAIDARVGPGTVL KEEEDFVEDVL++A RHFLLLGR EL++AVR +C DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHI EANRINED EPRL+AFY W L ET
Sbjct: 1 MGRARVDPERAQKAIDAVRSGEMSFRVAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEDFVEDVLMHAFRHFLLLGRGELKEAVRKICLDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHICEANRINEDDEPRLEAFYETWEACLAET 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig20.4347.1 >prot_P-fluviatile_contig20.4347.1 ID=prot_P-fluviatile_contig20.4347.1|Name=mRNA_P-fluviatile_contig20.4347.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=137bp TCLIRVEDAFRRELGLLQVLRPCVVESLKARLAVFVNPVCFVDVGGSLRQback to top mRNA from alignment at P-fluviatile_contig20:1482895..1483551+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig20.4347.1 ID=mRNA_P-fluviatile_contig20.4347.1|Name=mRNA_P-fluviatile_contig20.4347.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=657bp|location=Sequence derived from alignment at P-fluviatile_contig20:1482895..1483551+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig20:1482895..1483551+ >mRNA_P-fluviatile_contig20.4347.1 ID=mRNA_P-fluviatile_contig20.4347.1|Name=mRNA_P-fluviatile_contig20.4347.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=822bp|location=Sequence derived from alignment at P-fluviatile_contig20:1482895..1483551+ (Porterinema fluviatile SAG_2381)back to top |