mRNA_P-fluviatile_contig1.380.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig1.380.1
Unique NamemRNA_P-fluviatile_contig1.380.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:4469805..4470883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score83.2
Seed ortholog evalue7.2e-14
Seed eggNOG ortholog2880.D8LI20
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
Ec32 ortholog descriptionSecreted protein kinase
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase
Ec32 orthologEc-04_002910.1
Exons2
Model size285
Cds size282
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815328.4492118-CDS-P-fluviatile_contig1:4469804..44699211622815328.4492118-CDS-P-fluviatile_contig1:4469804..4469921Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4469805..4469921 +
1693561508.6102502-CDS-P-fluviatile_contig1:4469804..44699211693561508.6102502-CDS-P-fluviatile_contig1:4469804..4469921Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4469805..4469921 +
1622815328.4626765-CDS-P-fluviatile_contig1:4470716..44708811622815328.4626765-CDS-P-fluviatile_contig1:4470716..4470881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4470717..4470881 +
1693561508.624318-CDS-P-fluviatile_contig1:4470716..44708811693561508.624318-CDS-P-fluviatile_contig1:4470716..4470881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig1 4470717..4470881 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.380.1prot_P-fluviatile_contig1.380.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig1 4469805..4470881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig1.380.1

>prot_P-fluviatile_contig1.380.1 ID=prot_P-fluviatile_contig1.380.1|Name=mRNA_P-fluviatile_contig1.380.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=94bp
SGGGGSRGQRVGGKDREQWVVWCTCVALTLEKADQALGRATAHDGAVERV
VMDNIREGILEMNEIMQSLESRGCSALDASSSGLCRRRKEEVDR
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mRNA from alignment at P-fluviatile_contig1:4469805..4470883+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig1.380.1 ID=mRNA_P-fluviatile_contig1.380.1|Name=mRNA_P-fluviatile_contig1.380.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1079bp|location=Sequence derived from alignment at P-fluviatile_contig1:4469805..4470883+ (Porterinema fluviatile SAG_2381)
TCCGGCGGCGGCGGAAGCCGCGGTCAACGTGTCGGCGGGAAGGATCGTGA
GCAGTGGGTGGTGTGGTGCACCTGTGTTGCTCTGACCTTGGAGAAGGCAG
ACCAGGCGCTTGGGCGGGTGAGTGAGACGGGGCGTGTTCCTCCACATTGC
CGTCTTTCGTCGTCCATTACAGGGAGCTCTGCTATTTTGAAGCGTGGCGC
TTGGATCAATTCTTCTCCCGCGCGCTTGCGGTGTAAGCACACTTTCCACG
CTGTTTCACAGCCGCTCCTGAGCAACTCTTCGCTGTTTTGTGCCCGTGAG
TTTGGGCCGCAGAGTCTGCAAGACAGGAGTCGGTCACAGAGAATCCCTCA
CTAAACTTGGGAATCAACGGCAATGATCTGCGTTTCACATAAGATTTTGG
CTTCATGAGGTAGATTTTTTGTTCGCCCTACGGCTGCTCGACAGCTGACA
TACCACTCCCCTGGGGCGGGTCGGCGTGCAGAGGTCGCTCATACCCCTCT
CTCGCTGAGCTTGATTGTTTAAGTTTTCCGTCGCACGTCCGCTGCCTAGC
GGGCACGTGGGGTAACAAGGTAACGAAGATTCGGGCGCGCAGGAGGAAGG
CAACAACACGCTGCACGCACACAAGACATGGGCTTGCACACAGCCGGGAG
GAGCACGAAGACATAATTAAGTTTCGCTCCATCGCGTCTTCCAGTCCCTC
TGATCAGGTTCCGGTATCGGATCACATACACACACAGTACTCCGTAGTGC
TCCGGTGGCGGTCGATATCCGTGGCCGTCCCGTGTTACTGAAAACATCGT
CGGGTTCAGAAAACACAAACGACATTTTTTTTTAAGATTCCGCTCCGACC
CCTGCGGCGACGTGTTCCTGGTAAAGTAACTCATTCCGTCGAAAACCCAC
TCGGTCGCGCAGGCTACGGCTCACGACGGCGCGGTAGAGCGCGTCGTGAT
GGATAACATCAGGGAGGGCATCCTCGAGATGAACGAGATCATGCAATCCC
TCGAGAGCCGGGGCTGTTCCGCGCTAGACGCGTCGTCGTCCGGCCTCTGC
CGTCGGAGGAAGGAAGAGGTCGATCGGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig1:4469805..4470883+

>mRNA_P-fluviatile_contig1.380.1 ID=mRNA_P-fluviatile_contig1.380.1|Name=mRNA_P-fluviatile_contig1.380.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=564bp|location=Sequence derived from alignment at P-fluviatile_contig1:4469805..4470883+ (Porterinema fluviatile SAG_2381)
TCCGGCGGCGGCGGAAGCCGCGGTCAACGTGTCGGCGGGAAGGATCGTGA
GCAGTGGGTGGTGTGGTGCACCTGTGTTGCTCTGACCTTGGAGAAGGCAG
ACCAGGCGCTTGGGCGGTCCGGCGGCGGCGGAAGCCGCGGTCAACGTGTC
GGCGGGAAGGATCGTGAGCAGTGGGTGGTGTGGTGCACCTGTGTTGCTCT
GACCTTGGAGAAGGCAGACCAGGCGCTTGGGCGGGCTACGGCTCACGACG
GCGCGGTAGAGCGCGTCGTGATGGATAACATCAGGGAGGGCATCCTCGAG
ATGAACGAGATCATGCAATCCCTCGAGAGCCGGGGCTGTTCCGCGCTAGA
CGCGTCGTCGTCCGGCCTCTGCCGTCGGAGGAAGGAAGAGGTCGATCGGG
CTACGGCTCACGACGGCGCGGTAGAGCGCGTCGTGATGGATAACATCAGG
GAGGGCATCCTCGAGATGAACGAGATCATGCAATCCCTCGAGAGCCGGGG
CTGTTCCGCGCTAGACGCGTCGTCGTCCGGCCTCTGCCGTCGGAGGAAGG
AAGAGGTCGATCGG
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