mRNA_P-fluviatile_contig2.3937.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6H5JAX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAX8_9PHAE) HSP 1 Score: 466 bits (1199), Expect = 8.700e-160 Identity = 261/416 (62.74%), Postives = 303/416 (72.84%), Query Frame = 1
Query: 1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQVENNSRPNGISDLGGERATAGGNGAEVIDVDEST--------TGNSGGISKG-DRGGGKGWAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTA------------RNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
M+SS GATLN L++SWQL+ A SF++ ++ +AW GRV FRRPEDRRAFRP GLA+TFAN+AGFPLLLM ALCEQDYV+SD+ DDA+ECFTQATGMIFIYVVVWQ +FFGWGF+ALGHDDTLER LTG+ +++ T + +S Q+ R N A VID++ T T N+GG G D G WA ++R R+L+SP I++VT GVVIAMIAPLQ+MLFDN R++LRPLGAALQTVG PEVAVSTLVMAGSLA VP A AST R +RI+AGFLHVVCRLIVVPA+GF FWVARTQS V GENRLMH ILLIEFAMPSAAFVIVSLNQLR+PATAGFMAR+YLWQY ASM T+ AWTALA+HLVY
Sbjct: 59 MISSLGATLNPEALKNSWQLVVAGSFTVALSGTVAWVVGRVFFRRPEDRRAFRPAGLAITFANSAGFPLLLMNALCEQDYVRSDYNDDALECFTQATGMIFIYVVVWQMYFFGWGFYALGHDDTLERSLTGQQTRTRTPSTKXXXXXXXTSSTSSARQEHGGVGRINAAE-------------AVVIDIEPCTGEESSSEGTTNAGGTEDGGDVSEGGPWAGFKERVSRVLVSPNIISVTIGVVIAMIAPLQEMLFDNSRSILRPLGAALQTVGTPEVAVSTLVMAGSLAQVPTVAAASTQGGQGDDDGTLRRKRRFRIIAGFLHVVCRLIVVPAIGFTLFWVARTQSSVMGENRLMHLILLIEFAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 461
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: D7FW26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW26_ECTSI) HSP 1 Score: 424 bits (1089), Expect = 5.650e-143 Identity = 246/419 (58.71%), Postives = 290/419 (69.21%), Query Frame = 1
Query: 1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQVENNSRPNGISDLGGERATAGGNGAEVIDV---DESTTGNSGGISK------GDRGGGKGWAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTA---------------RNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
M + TGATL L+D+WQL+ SF+IG + +AW GRV FRRPEDRRAFRP LA+ F N+AGFPLLL+ ALCEQDY+ SDF DD VECFTQATGMIFIYVVVWQ +F+ WGF+ALG DD LERKL GE KS P E + + SS + + ++ P ++ G R + +GA V+ +E +G SG + GD G WA L++R R+++SP ++AV GV IAMI LQ+ LFDNPRAVLRPLGAA++T+G P VAVSTLVMAGSL VP AS A R +RIL GFLHVVCRLIVVPAVGF FWVAR QS V GENRLMH ILLIE AMPSAAFVIVSLNQLR+PATAGFMAR+YLWQY ASM T+ AWTALA+HLVY
Sbjct: 59 MTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFRRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINSDFDDDEVECFTQATGMIFIYVVVWQVWFYSWGFYALGQDDELERKLAGEAAKS-----PSEATTDDVEISSPC-EIAQGDALPPRQAEGGSGRQSPTHDGAVVVGASRRNEGVSGTSGTAAASHAGKDGDDEGCCSWAGLRRRLWRLVVSPNMIAVAIGVTIAMIPALQEQLFDNPRAVLRPLGAAVETIGSPTVAVSTLVMAGSLVQVPTVGAASAAASQGGQGDDDGTLRRWRRFRILVGFLHVVCRLIVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMVTITAWTALAVHLVY 471
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6H5J918_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J918_9PHAE) HSP 1 Score: 269 bits (688), Expect = 2.060e-80 Identity = 218/628 (34.71%), Postives = 269/628 (42.83%), Query Frame = 1
Query: 1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVK-------SDFGDDAVECFTQATGMIFI------------------------YVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQVENNSRPNGISDLGGERATAGGNGAEVIDVDESTTGNSG---------GISKGDRGGGKGWAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQ----------------TVGQPEVAVSTLVMAGSLAHVPNAAVASTTA---------------RNYRILAGFLHVVCRLIV------------------------------------------------------------------------------------------------------------------------------------------------------------------VPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
M + TGATL L+D+WQL+ SF+IG + +AW GRV F+RPEDRRAFRP LA+ F N+AGFPLLL+ ALCEQDY+ F + + + TG+ Y + Q +F+ WGF+ALG DD LERKL GE K P E + + SS + + ++ P +D G + +GA ++ G SG GD G WA L++R R+ +SP ++AV GV+IAM+ LQ++LFD+PRAVLRP GAA++ T+G P VAVSTLVMAGSL VP S A R +RI+ GFLHVVCRLIV VPAVGF FWVAR QS V GENRLMH ILLIE AMPSAAFVIVSLNQLR+PATAGFMAR+YLWQY ASM T+ AWTALA+HLVY
Sbjct: 56 MTAGTGATLTPGTLQDAWQLVVTGSFTIGFSGVVAWLVGRVSFQRPEDRRAFRPAALAIAFPNSAGFPLLLVDALCEQDYINRWPTQNTKLFDNVLLWRGVETTGLYIATCELAPRPAACSHTLRRQGFSFHGYGQILQVWFYSWGFYALGQDDELERKLAGEEAK-----IPSEATTDDVEISSPC-EIAQGDALPPLQADGGSGMQSPIHDGAVIVGASRRNEGVSGTGGTAVASHAGEDGDDAGCFSWAGLRRRLWRLAVSPNMIAVAIGVIIAMLPALQELLFDSPRAVLRPFGAAIEVGHCSLAATPVAIEQGTIGSPTVAVSTLVMAGSLVQVPTVGAGSAAATQGVQCDDDGTLRRWRRFRIVVGFLHVVCRLIVGEHADPRAARFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVPAVGFTLFWVARNQSSVMGENRLMHLILLIELAMPSAAFVIVSLNQLRMPATAGFMARLYLWQYGASMLTITAWTALAVHLVY 677
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6H5J8G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8G0_9PHAE) HSP 1 Score: 260 bits (665), Expect = 1.500e-77 Identity = 197/551 (35.75%), Postives = 260/551 (47.19%), Query Frame = 1
Query: 1 MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRE-----------------------------RISSRSDPSSELPQQVENNSR-------PNGISDLGGERATAGGNGAEV------ID-----------------VDESTTGNSG--------------------------------------------------------------------------------GISKGDRGGGKG------WAELQQRGRRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAA-----------VASTTARNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
M++ GA LN LRDSW L+ +++ SIG++ +AW+ G + RR + R FRPV LA+ F N PL+L ALCEQD + SDF D ECF QATGMIFI++ VWQ +F+ WG + +D+ LE LT +P + + T RE ++SS + P S + + N+S P + + G+RA+ G V +D ES TG +G G GD GG+G W E + R +L+SPVIVAV G+VI I PLQ MLF NP+A+LRPLG A+Q VG P V VS+LVMAGSL V A VA R R + GFL V RL+ +PA F FWVA+T S V GENRLMH ILL+EFAMP+A +I L+Q+RLP TAGF++R+ +WQY AS TV+ WTALA+ ++Y
Sbjct: 75 MLAGMGANLNPGALRDSWHLVVSSTLSIGLSNGVAWAFGWLLMRR-DARAKFRPVQLAIAFPNALVVPLVLFDALCEQDLINSDFDGDNNECFDQATGMIFIFLAVWQVWFYAWGVYCFQNDNALELALTSQPAAAPLPTTVRETAISSGGTGPPHAPDPPRCQSGHGNGSITKVSSSTSPPSSVT--LRNSSPKHTLHLIPAEAAKVDGDRASEWAEGGAVGGDSGAVDPQAGAAAAGDETGVVGAATESGTGATGTGAKSHGSPVGSLHSREVGVESTPLGRDQPTLMEQTGRGGCGDADASEVASMPRRRKENKAVADLLVIEEGNVIDGGGARGSGTGDVNGGRGSDSEGPWEEAKHRAWALLVSPVIVAVVAGIVICTIEPLQDMLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAVSAVADEAAPPAGGNEVAVPIWRRPRFVTGFLLVFLRLVAIPAAFFGIFWVAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTALAITMLY 622
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: D7FW24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW24_ECTSI) HSP 1 Score: 148 bits (374), Expect = 8.910e-40 Identity = 88/164 (53.66%), Postives = 110/164 (67.07%), Query Frame = 1
Query: 733 MLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTA-------------RNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
MLF NP+A+LRPLG A+Q VG P V VS+LVMAGSL V +AVA+ A R R + GFL V RLI +PA F FW A+T S V GENRLMH ILL+EFAMP+A +I L+Q+RLP TAGF++R+ +WQY AS TV+ WTA A+ ++Y
Sbjct: 1 MLFHNPQALLRPLGGAIQAVGVPTVTVSSLVMAGSLVAV--SAVANGAAPSAGGHEAAVPIWRRPRFVMGFLLVFLRLIAIPAAFFGVFWGAKTYSSVMGENRLMHLILLVEFAMPTATIMIPLLHQIRLPRTAGFISRLLVWQYAASSITVSFWTAFAITMLY 162
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A835Z6D5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D5_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.800e-28 Identity = 143/546 (26.19%), Postives = 216/546 (39.56%), Query Frame = 1
Query: 7 SSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRR-PEDRRAFRPVGLAVTFANTAGFPLLLMGALCEQDYVKSDFGDDAVECFTQATGMIFIYVVVWQAFFFGWGFFALGHDDTLERKLTGEPPKSQILRTPRERISSRSDPSSELPQQV--------------------------------------ENNSRPNGISDLGGERATAGGNGAEVIDVDESTTGNSGGISKGDRGG---------------GKGWAELQQRGR----------RILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAG--------------------------------------------------------------------------SLAH----VPNAAV----------ASTTARNYRILAGFLHVVCRLIVVPAVGFATFWVARTQS-MVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
+S GA L+ ++L + LL A + + AI+W C + P + R F+ V +AV F N PLL M +LC+QD V +D+ A ECF AT MIF+Y++ W +F+ WGF+ L D L+ K T PP L I+ D + V + ++ + G RA A A + + S G++ D+ G A L ++ R R ++SP VAV GV I ++ L++ +F + + LRP+GAA+ T+GQP +A+ TL+MA SLAH + AA A + R +L + V+ L+VVPAVGFA F + + + G L+ ++L++ MP A VIV L+ L LP A +AR+YL+QYVAS+ T+ A A+A+ VY
Sbjct: 16 ASMGANLSTSLLLEYSPLLVADT----VIRAISWVVITACEKLLPVEPRLFKAVKIAVLFCNVGSIPLLYMESLCDQDIVNADYDGSASECFAAATSMIFVYLITWHIWFYSWGFYELAKADDLDEKPTALPPVDNFLGVS---ITGDFDRPHSMAVSVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAGGARTFKLSAAASECDSTTGARAAARAPDALLPPLSHSRCGSAASGPAADKAARAPAFASAAANPDVRANGLAPLPEKQRWWLGGAGGVWRAVVSPPNVAVLLGVTIGVVPALREGMFHDATSPLRPIGAAIVTIGQPTIALQTLLMAARSSSTSPSSDHGTCISTCDRAARSSSSGAAPLSLHSCWVRRESCHQAPYWRRMTFKCTHSHCAPSLPPHSPPPRSLAHSHGRLQLAAAXXXXXXXXXXAQRSLRRSEVLTAAVFVLVPLVVVPAVGFAAFVLLHDNTAFLRGAPPLLQLLILLQLGMPGAQAVIVGLSHLALPRMAAALARLYLYQYVASIATLTALAAVAMMYVY 554
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A836C7K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K1_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.450e-16 Identity = 74/225 (32.89%), Postives = 110/225 (48.89%), Query Frame = 1
Query: 655 RRILLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHV-PNAAVASTTARNYRIL-AGFLH-----------------VVCRLIVVPAVGFATF-WVARTQSMVTGENRLMHFILLIEFAM----------------------------PSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTALALHLVY 1185
+R +P +AV GV+I +I PL LF N R+ LRP+GAA+ TVGQP VA++TL+MA SLA NAA+ + T ++ A LH V C L+VVP +GF F ++ ++ LM +++ + PS VI+SL+Q+ LPA A +ARMY++QY+ S+ T+ AL + +Y
Sbjct: 399 KRAASTPPNIAVALGVIIGLIPPLANGLFHNSRSPLRPIGAAMVTVGQPYVAIATLLMASSLAQSRKNAALPTPTVVGTEVMDAAQLHNAQQEQARREKITMLVLVFCPLVVVPMLGFGIFAFLDNYTPILNSATPLMKLLIIFQVTTTSMLRLMVEIXXXXXXXXXXXXXXXXXXPSGLSVIISLSQMHLPAMASSLARMYMYQYLLSIITLTVLAALTMAYIY 623
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Match: A0A6A2YYK9_HIBSY (Auxin efflux carrier family protein isoform 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YYK9_HIBSY) HSP 1 Score: 68.2 bits (165), Expect = 7.140e-9 Identity = 51/187 (27.27%), Postives = 94/187 (50.27%), Query Frame = 1
Query: 631 WAELQQRGRRI--------LLSPVIVAVTTGVVIAMIAPLQKMLFDNPRAVLRPLGAALQTVGQPEVAVSTLVMAGSLAHVPNAAVASTTARNYRILAGFLHVVCRLIVVPAVGFATFWVARTQSMVTGENRLMHFILLIEFAMPSAAFVIVSLNQLRLPATAGFMARMYLWQYVASMFTVAAWTAL 1167
W ++ +R + I + +P +A G +I + +P++K+L N A LR + ++ +G+ + TL+M G+L+ N + S T ++ G + V R I++P +G A ++ EN+L HF+LL++FA+P A V + +L + + LW YV + FT+ W+ L
Sbjct: 220 WKKIMRRMKSISEKVDLKKVFAPTAIAAIVGFIIGIASPIRKLLIGN-EAPLRVVDSSAYILGETAIPCMTLIMGGNLSRGLNGSDVSRT-----VIIGIIGV--RNILLPLIGIGVVKAALHLGLIASENKLYHFVLLLQFAVPPAISVGTMTQKFQLGQCETSV--IMLWTYVIAAFTLTIWSTL 396 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3937.1 >prot_P-fluviatile_contig2.3937.1 ID=prot_P-fluviatile_contig2.3937.1|Name=mRNA_P-fluviatile_contig2.3937.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=396bp MVSSTGATLNRAVLRDSWQLLAAASFSIGIAAAIAWSAGRVCFRRPEDRRback to top mRNA from alignment at P-fluviatile_contig2:2501802..2505305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3937.1 ID=mRNA_P-fluviatile_contig2.3937.1|Name=mRNA_P-fluviatile_contig2.3937.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3504bp|location=Sequence derived from alignment at P-fluviatile_contig2:2501802..2505305- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:2501802..2505305- >mRNA_P-fluviatile_contig2.3937.1 ID=mRNA_P-fluviatile_contig2.3937.1|Name=mRNA_P-fluviatile_contig2.3937.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2376bp|location=Sequence derived from alignment at P-fluviatile_contig2:2501802..2505305- (Porterinema fluviatile SAG_2381)back to top |