mRNA_P-fluviatile_contig2.3673.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig2.3673.1 vs. uniprot
Match: D8LCZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ4_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.940e-68 Identity = 190/429 (44.29%), Postives = 230/429 (53.61%), Query Frame = 1
Query: 172 FVDKDRPPLEGLKGLGLMRAMRALDGLRKHHATVAEENTLGASGRLDVQDRAGILALCGCQRGCRLTADEMKTIQRLTNGMVGTWVLLERQFQKLASEIRSK-TADQASHQRE-LGAFFEVADTWLAYHDEVRVLAARKQTELRLESSPSAGTGGRNVGSPARAKSLPTFPTWLSTLVERYQIEQGRWLEDGKPKRGDGNPSPESGASTAHELARDTARKSGLSREGEEARQSGLQTSSDTRTTGAVGEGLPVGGSRDPANSKAACITGDGGGAAAGDAEASADRDDAALDSDAATLVDSLARFSLYLALLVESGQGGQTPSTTKAERAALAELLRASDDGSDRRERIDPSLPHPLKTSN--HEGVLPPSPTRLRPRPS-PVGPPRSPRPLRYWARRIHRFLLSVRELKAVPDRDAEALEAIMSELRRG 1443
FVD+D P LE L+ LGL +AMRALDGLRKH+AT AEE+ LGASGRLD QDRAG+L LCGCQRGCRLT+DEMKT+QRLT GM G + LE QF+ LA ++R + +A + S + E GAFF A +H + +S + G + G A KP+RG S A+++ + T G R EE++ + + T+ TT A EGL S + G GG A A + SL RFS YLALLV S Q TPS + ER+ALAELLRASDDGSD + HP TSN H+ P +P P PS PVG P SPRPLRYWARRIHRFLLSVREL+ VPDRD +LE IM E RRG
Sbjct: 22 FVDEDLPVLEDLRRLGLTKAMRALDGLRKHNATKAEESMLGASGRLDTQDRAGLLTLCGCQRGCRLTSDEMKTVQRLTRGMDGLFASLELQFETLAPKLRKRVSAGEGSARSEAFGAFFPAA----FHHPK--------------DSCQGCDSNGDDGGGSA------------------------------KPERGLQQASSFDNATSSTKAVGYTTTSMGP-RSTEESKITPISTT----TTAA--EGLVERNSDEKG--------GTGGRA----------------PECAGPPMGSLVRFSRYLALLVASAQEEHTPSANECERSALAELLRASDDGSDSGSSGVVNTRHP-GTSNIVHQNQSPAAPA---PGPSTPVGSPGSPRPLRYWARRIHRFLLSVRELRTVPDRDLASLEEIMLEARRG 367 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig2.3673.1 >prot_P-fluviatile_contig2.3673.1 ID=prot_P-fluviatile_contig2.3673.1|Name=mRNA_P-fluviatile_contig2.3673.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=483bp MESNIAPPTAPPPPPPPPPPPLPPTPPPAPAAQHDSCPIFSTPVSKKCSFback to top mRNA from alignment at P-fluviatile_contig2:241805..245268+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig2.3673.1 ID=mRNA_P-fluviatile_contig2.3673.1|Name=mRNA_P-fluviatile_contig2.3673.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3464bp|location=Sequence derived from alignment at P-fluviatile_contig2:241805..245268+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig2:241805..245268+ >mRNA_P-fluviatile_contig2.3673.1 ID=mRNA_P-fluviatile_contig2.3673.1|Name=mRNA_P-fluviatile_contig2.3673.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2898bp|location=Sequence derived from alignment at P-fluviatile_contig2:241805..245268+ (Porterinema fluviatile SAG_2381)back to top |