mRNA_P-fluviatile_contig2.3662.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig2.3662.1
Unique NamemRNA_P-fluviatile_contig2.3662.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: D8LFT7_ECTSI (Plastid phosphoglycerate mutase protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT7_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 5.500e-166
Identity = 252/333 (75.68%), Postives = 273/333 (81.98%), Query Frame = 1
Query:   85 MRRPARSRASPGGLVLTLAAARRSFARAFCFGGDGSGSAARGHAAGGRGTGKRLFRRKFAAEQPGERKSGTASLAT-TPPVSPFPP-GEDGELVSFFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWVKDPSNFHISGRYPARDLWARAGRAWEQIRSLQSTQDQRRTLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGEDRAERYRWVVPHASDFVEAADAARLLKDSADDNEYTL 1077
            MRRP R R +PGG ++ LA AR+SF RAFCFGG  S S            GKRLFR   AAE   +  +G   LAT TPP SPFPP G+DGEL SFFLLRHGQTNFNA+GRIQGTLDSSILTE GISQALEAGKTLAS  DL+LGPTV+VSPM RAQQTLE VR+ELR SE  KDF TVEIVPDIREIELFEWQG+LK+DIIK NPE+YA+WV DPSNF+ SGRYPARDLW RA  AW+QIRSLQS QDQ RTL+VAHNAINQALLWTALGCD++YFRK+SWPNCAVLELQWRRGE RAERYRWVVP AS FVEAADAARLLKD  DDN YTL
Sbjct:    1 MRRPGRPRPAPGGFLIALATARKSFTRAFCFGGGSSSS-----------VGKRLFR-STAAESSAKAGTGPRGLATATPPESPFPPAGDDGELESFFLLRHGQTNFNAIGRIQGTLDSSILTEEGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSEISKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWKRASNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLLKDGEDDNRYTL 321          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: Q00GN2_KARBR (Plastid phosphoglycerate mutase protein (Fragment) n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GN2_KARBR)

HSP 1 Score: 177 bits (448), Expect = 7.070e-47
Identity = 104/243 (42.80%), Postives = 143/243 (58.85%), Query Frame = 1
Query:  364 FFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWVKDPSNFHISGRYPARDLWARAGRAWEQIRSLQSTQDQRR-----TLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGEDRAERYRWVVP--HASDFVEAADAARLLKDSADDNEY 1071
            + +LRHG+TNFNA G +QG+ D S LTE G +QA +AG  LA+  DL +   V VSP+ RA  TLE V + L  S           +P++REI+L+ W+G+ K+D+ +  P+ Y AW     +F + G YP  +LW RA  AW  IR+   ++D +R     TLIV HN I QAL ++A+G D+SYFR++S+PN   LE  W  GE  A R+RW +P   AS    +A AA L    A D  Y
Sbjct:   99 YLILRHGETNFNAKGILQGSSDISRLTEKGQAQANKAGMELATLSDLPI-EQVFVSPLTRATSTLELVAQSLPCS-----LPEAITLPELREIDLYSWEGKQKEDLKREMPDTYQAWKSADPDFVVDGHYPLVELWQRAKEAWAAIRA---SEDGKRDIDGVTLIVCHNGIGQALFFSAIGLDASYFRQLSFPNAGALECDWPLGELHASRWRWRLPLDEASSEWRSATAASL---DASDGRY 329          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: A0A7S0F1H7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1H7_9CRYP)

HSP 1 Score: 170 bits (431), Expect = 7.140e-44
Identity = 93/219 (42.47%), Postives = 139/219 (63.47%), Query Frame = 1
Query:  364 FFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWV-KDPSNFHI-SGRYPARDLWARAGRAWEQIRSLQSTQDQRRTLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGEDRAERYRWVVPHASDF 1014
            F +LRHG+TN+NA GRIQG+ D S LTE G +QA   G  L S + ++   +V VSP+ RA++TLE     L     R    +  ++ D+RE++L+EW+G LKK+I +  P+ Y+ W  ++P  F + SG+YP RDLW RA   W+ +R  +   + + TLIVAHN INQALL T LG    +FRK+ +PNC + E+    G+ +A+++RW+ P  S++
Sbjct:  158 FLILRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGGIL-SEIHID---SVFVSPLTRARRTLELAEAGL----GRNLSGSAIVLDDLREVDLYEWEGMLKKEIKEMYPDIYSLWRGENPRQFKLDSGKYPIRDLWKRASNVWDVLR--RDATNGKTTLIVAHNGINQALLCTTLGLSEEFFRKLEFPNCGIAEVIIPHGQSKAKQWRWLYPTPSEW 366          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: A0A7S4I552_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I552_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.680e-42
Identity = 96/248 (38.71%), Postives = 136/248 (54.84%), Query Frame = 1
Query:  337 PGEDGELVSFFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLEL---GPT--VIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWVK-DPSNFHISGRYPARDLWARAGRAWEQIRSLQ-------STQDQRRTLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGEDRAERYRWVVPHASDFVEAADAARL 1041
            P     L  +F+LRHG+T+ NA GRIQG+ D S LTE G SQA   G  +    D E    GP   V  SP+ RAQ+TL+ +RE    S    +   V  + ++REI+L++W+G    +I + +PE YAAW   D     +SG  P  ++WARAGR WE IRS         S ++   TL+V H  + Q LL +ALG D ++FR+  +PNC + E+ W   E+ A  +RW  P  S+ ++  D   L
Sbjct:   33 PPSSASLHRYFILRHGETDANASGRIQGSADFSRLTERGQSQAARVGSVVFGGSDGEGSIDGPIRHVYASPLTRAQETLQIIREHADPSLIPGEGEIV--LDELREIDLYDWEGRHTSEIEENDPEAYAAWTMGDAHGMEVSGCKPIVEMWARAGRVWEIIRSANAVAGRTDSDENPSSTLLVCHGTLGQGLLSSALGLDETHFRRHDFPNCGMAEIVWYHDEEIARNWRWHHPSRSELMQPFDQTVL 278          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: A0A7S4C0X0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0X0_CHRCT)

HSP 1 Score: 163 bits (413), Expect = 1.930e-42
Identity = 101/256 (39.45%), Postives = 136/256 (53.12%), Query Frame = 1
Query:  298 ASLATTPPVSPFPPGEDGELVSFFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIV-PDIREIELFEWQGELKKDIIKRNPEEYAAWVKDPSNFHISGRYPARDLWARAGRAWEQIRSLQSTQDQRRT-LIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRG--------------EDRAERYRWVVPHASDFV 1017
            +S A  PP S  P    G    F +LRHG+TN NA G IQG+ D S+LT+ G  QA  AG+ LA          V VSP+ RA+ TLE  R+            T EIV  D+RE++L++W+G  K D+ +  P+EY AW   P  F +SG+ P  DLWARA   W +I S         T L+V H+ I QALL TALG D   FR+ + PNC  +EL+W  G              +  A R+RW++P+ S++ 
Sbjct:   17 SSAALQPPTSAAP----GAGCKFVILRHGETNHNADGIIQGSSDVSVLTDKGKEQARRAGEQLAELYQEGSISKVFVSPLSRARDTLELCRKTA-------PLPTGEIVLADLREVDLWDWEGRNKADLRRERPDEYEAWKGQPLLFSVSGKKPIVDLWARARNVWREIHSQVPEDPSSGTILVVCHSGIGQALLSTALGEDERSFRRRALPNCGAVELEWIDGYVASTDGGVASMDSDCLANRWRWLIPNTSEWT 261          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: L1ISC6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ISC6_GUITC)

HSP 1 Score: 155 bits (393), Expect = 1.690e-40
Identity = 91/204 (44.61%), Postives = 125/204 (61.27%), Query Frame = 1
Query:  364 FFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRN-PEEYAAWV-KDPSNFHI-SGRYPARDLWARAGRAWEQIRSLQSTQDQRRTLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGE 966
            F  LRHG+TN+NA GRIQG+ D S LTE G +QA   G+ L+   D+ +  +V VSP+ RA+ TLE           R    +  ++ D+RE++L EW+G LKK  IK   P+ Y+ W  ++P  F + SG+YP RDLW RAG+ WE +R  +   + + +LIVAHN INQALL T LG    YFRK+ +PNC + E+    GE
Sbjct:   17 FLFLRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGRILS---DIPID-SVFVSPLTRARMTLELAAA----GSGRNLSDSAMVLDDLREVDLHEWEGMLKKQEIKEMYPDIYSLWRGENPREFKLDSGKYPIRDLWKRAGKVWEVLR--RDAANGKTSLIVAHNGINQALLCTTLGLSEEYFRKLEFPNCGIAEVIVPYGE 210          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: A0A812MB86_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812MB86_9DINO)

HSP 1 Score: 140 bits (353), Expect = 2.370e-34
Identity = 89/233 (38.20%), Postives = 130/233 (55.79%), Query Frame = 1
Query:  364 FFLLRHGQTNFNAMGRIQGTLDS-SILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVR----EELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWVKDPSNFHISGRYPARDLWARAGRAWEQIRSLQSTQDQRRTLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGEDRAERYRWVVPHASDFVEAADAARLLK 1047
            F L+RHGQT FNA  R QG++D  S+LT  GISQA E G+ L           V VSP++RA+QTLE  R    E L  +E +        + ++REI+L+EWQG  + +I   +PE    W ++  N  +SGRY  RDLW R+  AW ++R + +   + R+L+VAH AI +AL+ TALG     FR ++  N  V+E+ W   E    ++R + P    +   AD  + +K
Sbjct:   22 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKG----NPVAAVFVSPLLRARQTLEVARTVAGEVLPPTETK--------LSELREIDLYEWQGRTQDEIRAEDPELMRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQV-APSGEERSLVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGSE---AKWRKLHPDKGPWRCLADEEQAMK 238          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: R1DPI0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DPI0_EMIHU)

HSP 1 Score: 137 bits (344), Expect = 7.280e-33
Identity = 90/250 (36.00%), Postives = 131/250 (52.40%), Query Frame = 1
Query:  358 VSFFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWVKDPSNFHISGRYPAR-----DLWARA-GRAWEQIRSLQST---QDQRRTLIVAHNAINQALLWTALGCDSSYFRKIS------------WPNCAVLELQWRRGEDRAERYRWVVPHASDFVEAADAARLL 1044
            V F +LRHGQT+ N  G IQG+ D S L++ G +QA E G  LA   D+ +  T + SP+ RAQQT E +  +      R D  T   +  +REI+L  W+G  K ++    P+ YAAW  DP    + GR P       +LW RA   AW  +R++ +     D+  TL+V H ++ QALL TALG D++ +R+              +PNC + E+ W     RA R+RW +P    + ++  AAR L
Sbjct:   20 VRFLVLRHGQTDHNRDGIIQGSSDVSRLSDRGRTQAREVGAALARLGDVRVARTFL-SPLARAQQTHEILLLD------RPDLPTPTTLDGLREIDLGSWEGRAKAELRAEQPDVYAAWQCDPLAMVVDGRRPRCRKPIVELWERARSAAWPTLRAVDTAAAEDDEGATLVVCHGSLGQALLCTALGLDATAWRRHRLARCTAERARHPFPNCGMAEIDWPADAPRATRWRWRLPEEGCW-QSGTAARAL 261          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: A0A812LVJ0_9DINO (NEK1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812LVJ0_9DINO)

HSP 1 Score: 137 bits (346), Expect = 2.220e-31
Identity = 88/233 (37.77%), Postives = 130/233 (55.79%), Query Frame = 1
Query:  364 FFLLRHGQTNFNAMGRIQGTLDS-SILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVR----EELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWVKDPSNFHISGRYPARDLWARAGRAWEQIRSLQSTQDQRRTLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGEDRAERYRWVVPHASDFVEAADAARLLK 1047
            F L+RHGQT FNA  R QG++D  S+LT  GISQA E G+ L           V VSP++RA+QTLE  R    E L  +E +        + ++REI+L+EWQG  + +I   +PE    W ++  N  +SGRY  RDLW R+  AW ++R +  ++ +  +L+VAH AI +AL+ TALG     FR ++  N  V+E+ W   E    ++R + P    +   AD  + +K
Sbjct:  255 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKG----NPVAAVFVSPLLRARQTLEVARTVAGEVLPPTETK--------LSELREIDLYEWQGRTQDEIRAEDPEFIRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAPSRGET-SLVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGSE---AKWRKLHPDKGPWRCLADEEQAMK 471          
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Match: A0A4Y7LDN8_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LDN8_PAPSO)

HSP 1 Score: 137 bits (345), Expect = 3.440e-31
Identity = 84/215 (39.07%), Postives = 124/215 (57.67%), Query Frame = 1
Query:  325 SPFPPGEDGELVSFFLLRHGQTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSPMVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDIIKRNPEEYAAWVKDPSNFHISGRYPARDLWARAGRAWEQIRSLQSTQDQRRTLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGED 969
            +PFPP +  + V   L+RHGQ+ +N  GRIQG+ + S+LT+ G SQA  + + LA+    +       SP+ R+++T E + +      ARK+    E   D+REI+L+ +QG LK + I++  EE+  W KD  NF I G YP R+LW RA   W++I       +    L+VAHNAINQAL+ TA+G  + YFR +   NC V  L +   +D
Sbjct:   45 NPFPPIKSAKRV--VLVRHGQSTWNEEGRIQGSSNYSVLTKKGESQAETSRQMLAN----DTFDVCFNSPLNRSKRTAEIIWD------ARKEAMIPEF--DLREIDLYSFQGLLKNEGIEKYGEEFRRWQKDAPNFEIDGHYPVRELWVRARNCWDKI----LCHEGESVLVVAHNAINQALVATAMGLGTEYFRVLLQSNCGVSVLDFTPVDD 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig2.3662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT7_ECTSI5.500e-16675.68Plastid phosphoglycerate mutase protein n=2 Tax=Ec... [more]
Q00GN2_KARBR7.070e-4742.80Plastid phosphoglycerate mutase protein (Fragment)... [more]
A0A7S0F1H7_9CRYP7.140e-4442.47Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4I552_9STRA1.680e-4238.71Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4C0X0_CHRCT1.930e-4239.45Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
L1ISC6_GUITC1.690e-4044.61Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A812MB86_9DINO2.370e-3438.20Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
R1DPI0_EMIHU7.280e-3336.00Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A812LVJ0_9DINO2.220e-3137.77NEK1 protein n=1 Tax=Symbiodinium necroappetens Ta... [more]
A0A4Y7LDN8_PAPSO3.440e-3139.07Uncharacterized protein n=2 Tax=Papaver somniferum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig2contigP-fluviatile_contig2:143839..147327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.8
Seed ortholog evalue6.4e-134
Seed eggNOG ortholog2880.D8LFT7
KEGG koko:K22200
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0047538
EggNOG free text desc.regulation of pentose-phosphate shunt
EggNOG OGsCOG0588@1,KOG0235@2759
EC3.1.3.63
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionplastid phosphoglycerate mutase protein precursor
Ec32 orthologEc-01_000980.1
Exons5
Model size1750
Cds size996
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815822.98177-UTR-P-fluviatile_contig2:143838..1445081622815822.98177-UTR-P-fluviatile_contig2:143838..144508Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 143839..144508 -
1693563432.178416-UTR-P-fluviatile_contig2:143838..1445081693563432.178416-UTR-P-fluviatile_contig2:143838..144508Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 143839..144508 -
1622815823.0565646-UTR-P-fluviatile_contig2:146950..1469621622815823.0565646-UTR-P-fluviatile_contig2:146950..146962Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 146951..146962 -
1693563432.234653-UTR-P-fluviatile_contig2:146950..1469621693563432.234653-UTR-P-fluviatile_contig2:146950..146962Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 146951..146962 -
1622815823.0722075-UTR-P-fluviatile_contig2:147255..1473271622815823.0722075-UTR-P-fluviatile_contig2:147255..147327Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 147256..147327 -
1693563432.2482505-UTR-P-fluviatile_contig2:147255..1473271693563432.2482505-UTR-P-fluviatile_contig2:147255..147327Porterinema fluviatile SAG_2381UTRP-fluviatile_contig2 147256..147327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815823.001594-CDS-P-fluviatile_contig2:144508..1448391622815823.001594-CDS-P-fluviatile_contig2:144508..144839Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 144509..144839 -
1693563432.1905742-CDS-P-fluviatile_contig2:144508..1448391693563432.1905742-CDS-P-fluviatile_contig2:144508..144839Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 144509..144839 -
1622815823.0141609-CDS-P-fluviatile_contig2:145215..1453081622815823.0141609-CDS-P-fluviatile_contig2:145215..145308Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 145216..145308 -
1693563432.2000742-CDS-P-fluviatile_contig2:145215..1453081693563432.2000742-CDS-P-fluviatile_contig2:145215..145308Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 145216..145308 -
1622815823.0280352-CDS-P-fluviatile_contig2:145960..1461991622815823.0280352-CDS-P-fluviatile_contig2:145960..146199Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 145961..146199 -
1693563432.2090201-CDS-P-fluviatile_contig2:145960..1461991693563432.2090201-CDS-P-fluviatile_contig2:145960..146199Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 145961..146199 -
1622815823.043028-CDS-P-fluviatile_contig2:146617..1469501622815823.043028-CDS-P-fluviatile_contig2:146617..146950Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 146618..146950 -
1693563432.2186685-CDS-P-fluviatile_contig2:146617..1469501693563432.2186685-CDS-P-fluviatile_contig2:146617..146950Porterinema fluviatile SAG_2381CDSP-fluviatile_contig2 146618..146950 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig2.3662.1prot_P-fluviatile_contig2.3662.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig2 144509..146950 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig2.3662.1

>prot_P-fluviatile_contig2.3662.1 ID=prot_P-fluviatile_contig2.3662.1|Name=mRNA_P-fluviatile_contig2.3662.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=332bp
MRRPARSRASPGGLVLTLAAARRSFARAFCFGGDGSGSAARGHAAGGRGT
GKRLFRRKFAAEQPGERKSGTASLATTPPVSPFPPGEDGELVSFFLLRHG
QTNFNAMGRIQGTLDSSILTELGISQALEAGKTLASAVDLELGPTVIVSP
MVRAQQTLEYVREELRNSEARKDFTTVEIVPDIREIELFEWQGELKKDII
KRNPEEYAAWVKDPSNFHISGRYPARDLWARAGRAWEQIRSLQSTQDQRR
TLIVAHNAINQALLWTALGCDSSYFRKISWPNCAVLELQWRRGEDRAERY
RWVVPHASDFVEAADAARLLKDSADDNEYTL*
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mRNA from alignment at P-fluviatile_contig2:143839..147327-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig2.3662.1 ID=mRNA_P-fluviatile_contig2.3662.1|Name=mRNA_P-fluviatile_contig2.3662.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3489bp|location=Sequence derived from alignment at P-fluviatile_contig2:143839..147327- (Porterinema fluviatile SAG_2381)
GTTTACGGCAGCATCGCTTTGCTAACTCTCCGGACGCCGCTGTGTTTGTG TTGATTGCATACCTTTGTTCAGGTGCGTAATAGTTCAAGGCAGGTATACA AATGGCGTGCTGGTGTGCTTGTTGACCTTGAATGCAAAGGCTAACGGTTA CGTGTGGTGAAGCGGGGTAACTACCATTCCCCGTCGATGGCAAAGTCGCC TGTTTCGGGGCAATTAAAACGTGATTTCGGCTCTCGTATCAGTGTGTGAA GTGCGCCTGGCACACGTTTTGAACATCTCTGCCATCATGGGTGCCGAAAA GGCGTCCACAAAGTTAAATCTGTTCGTCAAATTTCTTTCACGTCAACACG TCACCTACCGAGCAGCGCCCAGAGAGCATGCGGAGACCAGCTCGCTCGCG CGCCTCTCCTGGAGGGCTTGTCCTCACTCTGGCAGCCGCCCGGAGGAGTT TCGCAAGGGCCTTTTGCTTCGGCGGCGATGGTTCTGGCTCCGCCGCGCGA GGTCATGCGGCCGGAGGACGCGGCACCGGAAAGCGGCTGTTTCGGAGGAA ATTTGCAGCGGAGCAACCTGGTGAGCGAAAGAGCGGTACGGCAAGTTTGG CCACCACGCCGCCGGTGTCTCCCTTCCCTCCCGGAGAGGACGGCGAGCTT GTGTCGTTTTTCTTGCTTCGACACGGGCAGACAAATTTCAACGCCATGGG GCGCATCCAGGTGAGCGCTGGCTTCAGGAGACCGGGATCTGGCTCTTTTG CAGGAAAGTTCAACTTCACCCAGATCTAAATGCCGTAATGACGTGTGTCG TGGGCGGCACACACGCTTATTCCGATTTGCCTCCCCCGCCGGTTCAAGCG TAGCCGAGCTCGCTTGTTCTAACAAGTTCTGTGTCCTGGCGTTGTTGGCA GTCGTCCGACTTTCAATATCATAAGCGCACGCAGCGCTTGGGAGCTCGCG CCTCTGTATACTTAAATGAGCAATGTCCCTCCTTCCGTGCAGCTCTCCAG GCTACCGATTGTCGCTGTGAGCCGGGGCGTGCGATCGCAGCACTAGCATG TTGTGATGCTGATTTGACGCCCGCCCTGCATTCGTCGTATGCGTCGCACG TTTTCCGTTGCCCACTTTTCCTGCACAGGGGACGTTAGACTCGTCTATCC TGACGGAGCTGGGGATCTCGCAAGCCTTGGAAGCTGGGAAGACGCTAGCC TCGGCTGTCGACCTCGAGCTCGGCCCCACCGTCATAGTGTCCCCAATGGT TCGGGCACAGCAGACACTCGAGTATGTGAGGGAGGAGTTGCGGAATAGCG AGGCTCGCAAGGACTTCACCACTGTGGAAATTGTTCCCGATATTCGGGAG ATTGAGCTCTTCGAGTGGTGAGTTTGCTCACCACTGGACTACATACAGCA AGCTCAAAGAATGGCGAAACGGAACAAGCTGGCACCGTTGCAACATCGTG CCTCAATGAGGCACAGCGTTTTGGGTCGAAACTGCTCGCTCTTGCAGTTC ACATGTGTTGTGTCGTTTCAACGGTGCAGGAGAGAGCACATGTCGGCGTG TTCAGCAGCCATTACTTGTGGGCACCGATGCCGCGTGCTCACGTTTGTTT CCCAACGTCAATAGGACAACTTCGTGCTTCATGATGCGCTTTGGCCACCA TAAAACCACCATCCCGATACCATGAACCAGGCTTGTGGTTTTTAGATTCG AGAGCTCGCCACATTTCATTTTTTGGTAAGTGGCTACCCGATATTTTTGA GATGAGAAAACCTTTGAGGCTGACAAATCGCTTGTCACAAAGCCGCCCAG CCAAACACATTCTCTGTTGGATTCAAGAGAAAGCCCGATAAGATAATCCA GCACGGCTTGGCGAACTCTCTCTCCAATCGTAGTCACTAGTGTTGGTACC GAGGTAAGGGCGCCCACCCTTGTTCCGAGCTTTTCGATGCGACCGATCTC TTGAACCCGACGCGACGCTTCCCCCGGCGTGTCCTGCTCATCGAACTCGC TCCCGTGCTCCGTTTACAGGCAGGGGGAACTGAAGAAGGACATAATCAAG AGAAATCCGGAGGAGTACGCTGCGTGGGTGAAAGATCCGTCCAACTTCCA TATTTCTGGGAGGTGAGCGCGATCTTTGTTCTCGTACAGCTTCCGGAGCA CCATTTTGTCGTGTAGATCGTTCGATCTTTCACGTGCGGATTATGGGCAA AGAGACCAGAAACTTCATGTGCATGCACACGCGAATAGTTGCAAATTTTC CGTGCAGCGCCCCTTTATCTCAGCCTTTGCCGTCGATCCTCCACAATGTG CTCGACTCACCCCTTACATCGGCAATCTCCGACTCTGTCAAATCGCCTCC CCCCACTCGCTACGGCGATGCCCTCCCGTGTGCACCTCATGAGGTAGACT CTGATATAGTTTGGCACACCAATTATCACCCAACCATTCATGGTCTATTT TGTGGCATGACACGACAAACCAACAACGACGAACACAGGTACCCGGCGAG AGACCTTTGGGCAAGGGCGGGCCGCGCCTGGGAGCAGATCCGCTCCCTCC AATCCACCCAGGACCAGCGCAGAACCCTCATCGTCGCCCACAATGCCATC AACCAAGCCCTCCTCTGGACGGCGCTCGGCTGCGACTCCTCGTACTTCAG AAAGATATCGTGGCCCAACTGCGCCGTGCTCGAGCTGCAATGGCGGCGTG GGGAGGACAGGGCCGAGCGGTACCGGTGGGTGGTGCCTCATGCTTCAGAC TTCGTCGAGGCGGCGGACGCGGCGCGGCTTCTCAAAGACAGCGCGGACGA CAATGAATACACGCTCTGAAGGCGCGTCTCGTTCGGTACAAGTGAAGCCG AGACGCTGGAGAGACACGAAGGACGGAAGGCTGCTGAAAGATGCGAATCA ATGGCATCCCGCGAACGCGCCAGTTTCGATTTTATTCCGGCTTGACAAGG ATGCCGATAGTAGCCTGTGGGTTTGGTGGGTGAGAGGGCTGGGGCCGGCT TTTCGTTCCAAAAATGGGCGATAGTCGCTTGTGCTCGGCCAAAATGGCGA ACGCTCGACATTGATTCGGCTGGAAACGACAAGCGCGCGTTGGTCTACGG TGTCTTCGCGCTTTCGGAGTGTGTGGATGGCCTTCCCGTGCGTCTTGAGC GGAAGGGTACGCCTGTCGAAGTTAATGCAGCGACGTCAGCAGCAACAACG AGAGCGTCTTTTTTTGGCGTCGAAACCTTGGCTACTGGCATAGAGCGAGC TTTGAAGCAACACGGTATTGAGTTTGAATTGTTTTCGATATCAGACTACA ATGGTAAGCGCTAGACTAGACCAAGTGTGTTGATCGTCAAGATCTTTCCC AGCGCTTGGTCCAATCAGCTCTCTCTGTGTCAAGCTCAGGAACGATGTAT TCCGTGGTTTTTGTGTGACGATTAGACGCTCATCGCATGTGTGCGGATCG TGAGAAACACCGAGGGCAGCGATGGACATTGAAACAAGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig2:143839..147327-

>mRNA_P-fluviatile_contig2.3662.1 ID=mRNA_P-fluviatile_contig2.3662.1|Name=mRNA_P-fluviatile_contig2.3662.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1992bp|location=Sequence derived from alignment at P-fluviatile_contig2:143839..147327- (Porterinema fluviatile SAG_2381)
ATGCGGAGACCAGCTCGCTCGCGCGCCTCTCCTGGAGGGCTTGTCCTCAC
TCTGGCAGCCGCCCGGAGGAGTTTCGCAAGGGCCTTTTGCTTCGGCGGCG
ATGGTTCTGGCTCCGCCGCGCGAGGTCATGCGGCCGGAGGACGCGGCACC
GGAAAGCGGCTGTTTCGGAGGAAATTTGCAGCGGAGCAACCTGGTGAGCG
AAAGAGCGGTACGGCAAGTTTGGCCACCACGCCGCCGGTGTCTCCCTTCC
CTCCCGGAGAGGACGGCGAGCTTGTGTCGTTTTTCTTGCTTCGACACGGG
CAGACAAATTTCAACGCCATGGGGCGCATCCAGATGCGGAGACCAGCTCG
CTCGCGCGCCTCTCCTGGAGGGCTTGTCCTCACTCTGGCAGCCGCCCGGA
GGAGTTTCGCAAGGGCCTTTTGCTTCGGCGGCGATGGTTCTGGCTCCGCC
GCGCGAGGTCATGCGGCCGGAGGACGCGGCACCGGAAAGCGGCTGTTTCG
GAGGAAATTTGCAGCGGAGCAACCTGGTGAGCGAAAGAGCGGTACGGCAA
GTTTGGCCACCACGCCGCCGGTGTCTCCCTTCCCTCCCGGAGAGGACGGC
GAGCTTGTGTCGTTTTTCTTGCTTCGACACGGGCAGACAAATTTCAACGC
CATGGGGCGCATCCAGGGGACGTTAGACTCGTCTATCCTGACGGAGCTGG
GGATCTCGCAAGCCTTGGAAGCTGGGAAGACGCTAGCCTCGGCTGTCGAC
CTCGAGCTCGGCCCCACCGTCATAGTGTCCCCAATGGTTCGGGCACAGCA
GACACTCGAGTATGTGAGGGAGGAGTTGCGGAATAGCGAGGCTCGCAAGG
ACTTCACCACTGTGGAAATTGTTCCCGATATTCGGGAGATTGAGCTCTTC
GAGTGGGGACGTTAGACTCGTCTATCCTGACGGAGCTGGGGATCTCGCAA
GCCTTGGAAGCTGGGAAGACGCTAGCCTCGGCTGTCGACCTCGAGCTCGG
CCCCACCGTCATAGTGTCCCCAATGGTTCGGGCACAGCAGACACTCGAGT
ATGTGAGGGAGGAGTTGCGGAATAGCGAGGCTCGCAAGGACTTCACCACT
GTGGAAATTGTTCCCGATATTCGGGAGATTGAGCTCTTCGAGTGGCAGGG
GGAACTGAAGAAGGACATAATCAAGAGAAATCCGGAGGAGTACGCTGCGT
GGGTGAAAGATCCGTCCAACTTCCATATTTCTGGGAGGCAGGGGGAACTG
AAGAAGGACATAATCAAGAGAAATCCGGAGGAGTACGCTGCGTGGGTGAA
AGATCCGTCCAACTTCCATATTTCTGGGAGGTACCCGGCGAGAGACCTTT
GGGCAAGGGCGGGCCGCGCCTGGGAGCAGATCCGCTCCCTCCAATCCACC
CAGGACCAGCGCAGAACCCTCATCGTCGCCCACAATGCCATCAACCAAGC
CCTCCTCTGGACGGCGCTCGGCTGCGACTCCTCGTACTTCAGAAAGATAT
CGTGGCCCAACTGCGCCGTGCTCGAGCTGCAATGGCGGCGTGGGGAGGAC
AGGGCCGAGCGGTACCGGTGGGTGGTGCCTCATGCTTCAGACTTCGTCGA
GGCGGCGGACGCGGCGCGGCTTCTCAAAGACAGCGCGGACGACAATGAAT
ACACGCTCTGAGTACCCGGCGAGAGACCTTTGGGCAAGGGCGGGCCGCGC
CTGGGAGCAGATCCGCTCCCTCCAATCCACCCAGGACCAGCGCAGAACCC
TCATCGTCGCCCACAATGCCATCAACCAAGCCCTCCTCTGGACGGCGCTC
GGCTGCGACTCCTCGTACTTCAGAAAGATATCGTGGCCCAACTGCGCCGT
GCTCGAGCTGCAATGGCGGCGTGGGGAGGACAGGGCCGAGCGGTACCGGT
GGGTGGTGCCTCATGCTTCAGACTTCGTCGAGGCGGCGGACGCGGCGCGG
CTTCTCAAAGACAGCGCGGACGACAATGAATACACGCTCTGA
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