mRNA_P-fluviatile_contig19.3586.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: D8LSF5_ECTSI (Selenopotein M n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF5_ECTSI) HSP 1 Score: 185 bits (470), Expect = 5.760e-50 Identity = 109/203 (53.69%), Postives = 127/203 (62.56%), Query Frame = 2
Query: 2327 MKLFPPAVGMLVLGAPSVVAQALRGLITSCSG*KLNKLPEAKKFISNIDHARGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGFVRRADVPGLAEVKEKEAAADATAEAARKERAEXXXXXXXXXXXXXXXXXXXEFEPKGDKHDDLGNAQA------AGLAAKRALDVEKLKARANEAGGDGEL 2917
MKLF +G L + A A+RG I SCSG KLNKLPEAKKF+ N +HA YED+EVE+KAGKPP+LT FDK SG+ETESINLEK ++DEMHE+LVSRGFVRRAD LAEVK KEA AD A +KERAE + + D G A+A A +A KR D K KAR +EAGG GEL
Sbjct: 6 MKLFAFVIGALFVSRACAQAAAMRGHIVSCSGXKLNKLPEAKKFLKNPEHAASYEDIEVEFKAGKPPVLTLFDKASGEETESINLEKFTIDEMHELLVSRGFVRRADAADLAEVKAKEAIADEAAAKQKKERAEAAAKRRLE---------------RENNRPDKGAAKAHQAEGRAAMAEKRKFDAAKRKARESEAGGSGEL 193
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: A0A6H5KUZ9_9PHAE (Sep15_SelM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ9_9PHAE) HSP 1 Score: 121 bits (304), Expect = 4.040e-28 Identity = 85/152 (55.92%), Postives = 98/152 (64.47%), Query Frame = 2
Query: 2480 RGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGFVRRADVPGLAEVKEKEAAADATAEAARKERAEXXXXXXXXXXXXXXXXXXXEFEPKGDKHDDLGNAQA------AGLAAKRALDVEKLKARANEAGGDGEL 2917
RGY + VE+KAGKPP+LT FDK SG+ETESINLEK ++DEMHE+LVSRGFVRRAD LAEVK KEA AD A +KERAEXXXXXX E + D+ D G A+A A + KR D K KAR +EA G GEL
Sbjct: 23 RGYR-ITVEFKAGKPPVLTLFDKASGEETESINLEKFTIDEMHELLVSRGFVRRADAADLAEVKAKEAIADEAAAKQKKERAEXXXXXX--------------LERENDRPD-RGAAKAHQAEDRAAMGEKRKFDAVKRKARESEADGSGEL 158
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: UPI000C780D3A (selenoprotein M-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C780D3A) HSP 1 Score: 58.9 bits (141), Expect = 1.290e-6 Identity = 31/81 (38.27%), Postives = 51/81 (62.96%), Query Frame = 2
Query: 2402 LITSCSG*KLNKLPEAKKFISNIDHARGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGFVRRA 2644
++ SCSG +LNKLPE K FI D YE + GK P F+++ +G E E +N+EK S +E+++++VS+G +++
Sbjct: 39 VVESCSGXRLNKLPEVKNFIYG-DLESKYERTVFKKVPGKSPEAIFYNQ-AGKELERLNIEKFSREELNQMMVSKGLPKKS 117
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: UPI0010F8920E (selenoprotein M-like isoform X1 n=2 Tax=Osmia TaxID=124287 RepID=UPI0010F8920E) HSP 1 Score: 55.5 bits (132), Expect = 1.690e-5 Identity = 28/80 (35.00%), Postives = 49/80 (61.25%), Query Frame = 2
Query: 2405 ITSCSG*KLNKLPEAKKFISNIDHARGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGFVRRA 2644
+ SCSG +LN+LP+ K+FI + Y +VE ++ G P L F++ +E E + L ++ +E + +LVS+GF ++A
Sbjct: 32 VESCSGCRLNRLPDVKQFI--FEDVPNYNNVEFKHIQGAVPELLLFNEND-EEVERLPLSSLTREECNNLLVSKGFTKKA 108
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: UPI001E1D50C5 (selenoprotein M-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D50C5) HSP 1 Score: 56.2 bits (134), Expect = 1.810e-5 Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 2
Query: 2396 RGLITSCSG*KLNKLPEAKKFISNIDHARGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGFVRRAD 2647
+ +I SCSG +LN+LPE KKFI + + D + K G PP+L +K + E I L++ S E +++L+ GF+++A+
Sbjct: 28 KAVIESCSGXRLNRLPEVKKFI--YEDIPLFHDATFKPKGGAPPVLQLMNKDN-QILEEIELDRKSRQECNDLLLQLGFLKKAN 108
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: A0A835CSK3_9HYME (Sep15_SelM domain-containing protein n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A835CSK3_9HYME) HSP 1 Score: 54.7 bits (130), Expect = 3.150e-5 Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 2
Query: 2399 GLITSCSG*KLNKLPEAKKFISNIDHARGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGF 2632
G++ SCSG LN+LP+ KKFI YE V+ ++ G P L ++ +E E + L +++ DE +E+L +GF
Sbjct: 30 GVVESCSGCSLNRLPDVKKFI--FSDVPNYERVQFKHIQGAVPELVLYNNNE-EEVERLQLSRLTRDECNELLQQKGF 104
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: UPI00142554F2 (selenoprotein M-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142554F2) HSP 1 Score: 55.1 bits (131), Expect = 3.560e-5 Identity = 30/94 (31.91%), Postives = 53/94 (56.38%), Query Frame = 2
Query: 2375 SVVAQALRGLITSCSG*KLNKLPEAKKFISNIDHARGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGFVRRADVPG 2656
++ A ++ + SC+G +LNKLPE K+FI N + + + K+G P+L F D +G E I++ MS E+ +++ +GF R+ + G
Sbjct: 17 TISADVMKAEVESCTGXRLNKLPEVKRFIHN--DLPYFHNAVFKPKSGASPVLFFLD-AAGGVVEKIDMAPMSQKELTALMLHKGFYRKKTLFG 107
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Match: UPI001C9A3191 (selenoprotein M-like isoform X1 n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A3191) HSP 1 Score: 54.7 bits (130), Expect = 4.020e-5 Identity = 27/81 (33.33%), Postives = 49/81 (60.49%), Query Frame = 2
Query: 2402 LITSCSG*KLNKLPEAKKFISNIDHARGYEDVEVEYKAGKPPILTFFDKTSGDETESINLEKMSLDEMHEVLVSRGFVRRA 2644
++ SCSG +LN LP+ K FI + Y VE ++ G P L FD+ + +E E + L +++ +E + +L+++GF ++A
Sbjct: 41 IVESCSGCRLNWLPDVKNFI--FEDLPNYNKVEFKHIRGAEPELVLFDRHN-EEVERLPLSRLTREECNNLLITKGFTKKA 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig19.3586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig19.3586.1 >prot_P-fluviatile_contig19.3586.1 ID=prot_P-fluviatile_contig19.3586.1|Name=mRNA_P-fluviatile_contig19.3586.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=111bp MSLDEMHEVLVSRGFVRRADVPGLAEVKEKEAAADATAEAARKERAEAATback to top mRNA from alignment at P-fluviatile_contig19:1833788..1839848+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig19.3586.1 ID=mRNA_P-fluviatile_contig19.3586.1|Name=mRNA_P-fluviatile_contig19.3586.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6061bp|location=Sequence derived from alignment at P-fluviatile_contig19:1833788..1839848+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig19:1833788..1839848+ >mRNA_P-fluviatile_contig19.3586.1 ID=mRNA_P-fluviatile_contig19.3586.1|Name=mRNA_P-fluviatile_contig19.3586.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=666bp|location=Sequence derived from alignment at P-fluviatile_contig19:1833788..1839848+ (Porterinema fluviatile SAG_2381)back to top |