mRNA_P-fluviatile_contig18.3205.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig18.3205.1
Unique NamemRNA_P-fluviatile_contig18.3205.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: D7FWN8_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN8_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 3.150e-154
Identity = 240/303 (79.21%), Postives = 264/303 (87.13%), Query Frame = 3 
Query:  285 GLFLSGLFAALSDGADGFIVQVSSGQSWSCLGAAGEA-SASALAGASPEGQAQDLPQALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDGESSEAVTLATLGAIIRRRQSVAS 1190
            GL L+G+ A +   ADGF   +     WS   +  EA  +S+ AG    GQ +DLPQALIFDCDGVLADTERDGHRPAFN+AFKIK+L DCEW VE YGKLLSVGGGKERMTAHWDEVGWPDCAKTA+ERS+LVKELHLLKTALFNQAVVDGEIPLR GVIRLVDEAI ++VPLAVCSTSNDKAVTNLVKTLMGKERL+ +++FAGD+VEKKKP+PDIY+LAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYT DEDFSAAD VTEELGEDGE+S +VTLATLGAI+R R S AS
Sbjct:    3 GLALAGVLAIICGKADGFASPIKMSHRWSGSTSPLEAVESSSTAG----GQTEDLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNL-DCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLVDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERMQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASTSVTLATLGAILRERASAAS 300
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: A0A835Z3K7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K7_9STRA)

HSP 1 Score: 315 bits (808), Expect = 8.960e-100
Identity = 162/241 (67.22%), Postives = 189/241 (78.42%), Query Frame = 3 
Query:  444 LPQALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDGESSEAVTLATLGAII 1166
            LPQALIFDCDGVLADTERDGHRPAFN AFK K + DC W V+ YGKLL VGGGKERMTAHWD+VGWP       ++  LV+ELHLLKT LFN+A+V G+IPLR GV+RLVDEAI ++VPLAVCSTSN++AV+NLV TLMG+ER +  ++FAGDVV  KKP PDIYNLA + + L P RV+V+EDS IGL AAK AGM CLVTKSSYT  E+FS AD V E L +DG+    V L  LG I+
Sbjct:   29 LPQALIFDCDGVLADTERDGHRPAFNEAFKAKGI-DCVWDVDLYGKLLEVGGGKERMTAHWDKVGWPLGITEKADKQALVQELHLLKTDLFNEAIVAGKIPLRPGVLRLVDEAIEQEVPLAVCSTSNERAVSNLVLTLMGRERYERFRIFAGDVVRAKKPQPDIYNLAAEALRLSPERVIVVEDSGIGLRAAKGAGMPCLVTKSSYTGGENFSLADEVVESL-DDGD----VDLQVLGNIV 263
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: A0A7S2FPW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPW0_9STRA)

HSP 1 Score: 314 bits (805), Expect = 3.770e-99
Identity = 166/266 (62.41%), Postives = 195/266 (73.31%), Query Frame = 3 
Query:  333 GFIVQVSSGQSWSCLGAAGEASASALAGASPEGQAQDLPQ----ALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGED 1118
            G ++Q   G SW    +     +S   GA    +   +      A++FDCDGVLADTERDGHR AFN AFK  +L D EW VE YG+LLSVGGGKERMTAHW++VGWP   ++ E R  LVK LHL KT LFN+ + +G IPLR GV+R+VDEAI+  VPL VCSTSNDKAVTNLV TLMG ER   I++FAGDVVEKKKP PD+Y LAK+TMGLD    +VIEDSHIGL AAK AGMNCLVTKSSYTA+EDFS AD + EELG++
Sbjct:    9 GLLIQFQQGHSWGFSSSINRHRSSVFHGAKQTCRGLSMSTGDNFAILFDCDGVLADTERDGHRVAFNTAFKENNL-DTEWSVELYGELLSVGGGKERMTAHWNKVGWPAEYESDESRRELVKSLHLRKTDLFNEMICEGIIPLRPGVLRVVDEAISAGVPLGVCSTSNDKAVTNLVLTLMGPERRSKIQIFAGDVVEKKKPSPDVYLLAKETMGLDAGSTMVIEDSHIGLQAAKGAGMNCLVTKSSYTANEDFSVADKIVEELGDE 273
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: W7UBX2_9STRA (Protein cbby n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBX2_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.730e-94
Identity = 152/222 (68.47%), Postives = 175/222 (78.83%), Query Frame = 3 
Query:  453 ALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGED 1118
            AL+FDCDGVLADTERDGHRP FN AFK K + DC W V  YG LL VGGGKERMTAHW++VGWP    +  +R  LV+ELH+LKT LF   + +G++PLR GV+R+VD AI   VPL VCSTSNDKAV  L++ LMG+ER+   ++FAGDVV KKKP PDIY LAK+ MGLD  R VVIEDSHIGLTAAKAAGM CLVTKSSYTA+EDF AAD V EELG+D
Sbjct:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGI-DCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKD 273
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: A0A7S1ZBJ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ4_TRICV)

HSP 1 Score: 295 bits (755), Expect = 9.180e-92
Identity = 150/241 (62.24%), Postives = 183/241 (75.93%), Query Frame = 3 
Query:  447 PQALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEE-RSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDGESSEAVTLATLGAII 1166
            P+A++FDCDGVLADTERDGHRPAFN AF    + D EWGVE+YG LL VGGGKERMTAHW+EVGWP      EE R   VKELHL KT +F   + +G IPLR GV+RLVDEAI   V LA CSTSNDKAV NL+ TLMG +R    +VFAGD+V+ KKP PD+YN+A + MGLD ++ V++ED+ IGL AAKAAG+ CLVTKS+Y   EDF+ AD + +ELG+D E+   VTLATLG+++
Sbjct:   45 PEAILFDCDGVLADTERDGHRPAFNRAFAENQI-DEEWGVERYGVLLEVGGGKERMTAHWNEVGWPSAMPDDEEGRQAKVKELHLQKTGIFMDMINEGAIPLRPGVLRLVDEAIENGVRLACCSTSNDKAVKNLIATLMGPDRAAKFQVFAGDMVKAKKPAPDVYNMAVEEMGLDKSKCVIVEDTDIGLGAAKAAGIKCLVTKSAYAEKEDFTGADLIVDELGDDPETG--VTLATLGSLL 282
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: A0A7S2V8N0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N0_9STRA)

HSP 1 Score: 293 bits (749), Expect = 8.730e-91
Identity = 152/243 (62.55%), Postives = 183/243 (75.31%), Query Frame = 3 
Query:  444 LPQALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSM--LVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDGESSEAVTLATLGAII 1166
            +P+A++FDCDGVLADTERDGHRPAFNA F+ + L D +W  E YG+LL VGGGKERMTAHW+EVGWP      ++ S   LVKELHL KT  FN+ +  G IPLR GV+RLVDEAI+  V LAVCSTSN+KAV NLV TLMG+ER    + F GD+V+KKKP PD+Y +AKD+MGLD ++ ++IEDS IGL AAKA+GM CLVTKSSYT +EDFS AD V   L +DG     VTL  LG I+
Sbjct:   47 VPEAILFDCDGVLADTERDGHRPAFNAVFEERRL-DTDWTPELYGRLLEVGGGKERMTAHWNEVGWPSSVSLHDDESKATLVKELHLAKTDEFNKMIKSGAIPLREGVLRLVDEAISNNVSLAVCSTSNEKAVKNLVLTLMGEERYSKFQFFCGDMVKKKKPAPDVYLMAKDSMGLDASKTIIIEDSGIGLQAAKASGMKCLVTKSSYTENEDFSKADCVVSSL-DDGN----VTLEKLGNIL 283
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: F0XWZ9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWZ9_AURAN)

HSP 1 Score: 286 bits (733), Expect = 1.260e-88
Identity = 142/223 (63.68%), Postives = 171/223 (76.68%), Query Frame = 3 
Query:  453 ALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDG 1121
            AL+FDCDGVLADTE DGHR AFNAAFK K  AD +W V++YG+LL  GGGKERMTAHWD  GWP      ++R  LVKELHL KTA+FN+ +  G IPLR GV+RL+DEA+   VP+ VCSTS+++AV NLV+ LMG+ER D +++FAGDVV  KKP PD+Y LA  TMGL+PAR VVIEDS IGL AAKAAGM C++TKSSY   EDF+ AD V ++L   G
Sbjct:   42 ALLFDCDGVLADTEPDGHRVAFNAAFKEKGFAD-DWSVDKYGQLLETGGGKERMTAHWDAAGWPAGYAGGDDRRALVKELHLRKTAIFNELIEAGSIPLRAGVLRLIDEALADGVPVGVCSTSSEQAVRNLVRVLMGRERYDALQIFAGDVVANKKPAPDVYLLAATTMGLEPARCVVIEDSSIGLAAAKAAGMKCIITKSSYADREDFTIADEVVDDLDAGG 263
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: A0A0G4EGM7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGM7_VITBC)

HSP 1 Score: 285 bits (730), Expect = 1.150e-87
Identity = 145/225 (64.44%), Postives = 171/225 (76.00%), Query Frame = 3 
Query:  447 PQALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEV--GWPDCAKTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGE 1115
            P  ++FDCDGVLADTERD HRPAFN AF+ K   D  WGV+ YG LL VGGGKERMTA+W+E   GWPD  +T EE++ LVKELHL KTA+FN  +  G++PLR GV R+VDEAI    PLAVCSTS+DKAVTNLV  L+G +R    ++FAGD+V KKKP PDIY LA   M LDP++ +VIEDS IGL AAKAAGM C+VTKSSYT +EDFS AD V  ELG+
Sbjct:   68 PFPILFDCDGVLADTERDAHRPAFNQAFREKGFDDV-WGVDLYGHLLEVGGGKERMTAYWNEKEGGWPDGYRTPEEQAALVKELHLRKTAIFNDLINQGQVPLRPGVARIVDEAIAAGCPLAVCSTSSDKAVTNLVNVLLGPQRAPRFRIFAGDIVAKKKPSPDIYLLAAQQMNLDPSKCLVIEDSGIGLKAAKAAGMRCVVTKSSYTQNEDFSGADMVIAELGD 291
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BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: B5YPA5_THAPS (Possibly a phosphatase from the CbbY protein family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YPA5_THAPS)

HSP 1 Score: 284 bits (726), Expect = 1.380e-87
Identity = 147/239 (61.51%), Postives = 183/239 (76.57%), Query Frame = 3 
Query:  450 QALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDGESSEAVTLATLGAII 1166
            +A++FDCDGVLADTERDGHR AFN AF++ S+ D  W  ++YGKLL VGGGKERMTAHW+EVGWPD A   + R+  V  LHL KT +F   + +G IPLR GV+RLVDEAI   V LAVCSTSN+KAV+NLV TLMG ER    ++FAGD+V+KKKP PD+Y +A DTMGLD +  V+IEDSHIG+ AA A+G++CLVTKSSYTA EDF+ A  + EELG+D  +   VTL TL +++
Sbjct:   39 EAILFDCDGVLADTERDGHRLAFNRAFQLNSI-DESWSEQRYGKLLEVGGGKERMTAHWNEVGWPD-AIPEDGRAEKVLGLHLQKTDIFMDLIDEGAIPLRPGVLRLVDEAIENGVRLAVCSTSNEKAVSNLVSTLMGAERASKFQIFAGDMVKKKKPAPDVYLMAVDTMGLDKSGCVIIEDSHIGVGAAVASGISCLVTKSSYTAGEDFTGAKKIVEELGDDAATG--VTLDTLASLL 273
[Close]
BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Match: A0A6V2Q9B2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q9B2_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.680e-87
Identity = 146/240 (60.83%), Postives = 180/240 (75.00%), Query Frame = 3 
Query:  450 QALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWGVEQYGKLLSVGGGKERMTAHWDEVGWPDCA-KTAEERSMLVKELHLLKTALFNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMGKERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDGESSEAVTLATLGAII 1166
            +A++FDCDGVLADTERDGHR AFN AF    + D  W  E+YG LL VGGGKERMTAHW+EVGWP    ++ +ER+  VK+LHL KT +F   + +G IPLR GV+RLVDEAI   V LAVCSTSNDKAV+NLV TLMG ER    ++FAGD+V+ KKP PD+YN+A D M LD +R V++ED+HIGL+AAKAAG+ C VTKSSYT  EDF+ AD + EELG+D E    VT  TL +++
Sbjct:   43 EAILFDCDGVLADTERDGHRIAFNRAFANNGI-DENWSEERYGVLLEVGGGKERMTAHWNEVGWPSVMPESPDERAAQVKKLHLEKTDIFMDLIDEGVIPLRPGVLRLVDEAIEAGVRLAVCSTSNDKAVSNLVSTLMGPERAAKFQIFAGDMVKAKKPAPDVYNMAVDEMKLDKSRCVIVEDTHIGLSAAKAAGIKCCVTKSSYTGGEDFTGADLIVEELGDDKEGG--VTAETLASLL 279
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWN8_ECTSI3.150e-15479.21Haloacid dehalogenase-like hydrolase family protei... [more]
A0A835Z3K7_9STRA8.960e-10067.22HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2FPW0_9STRA3.770e-9962.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7UBX2_9STRA1.730e-9468.47Protein cbby n=1 Tax=Nannochloropsis gaditana TaxI... [more]
A0A7S1ZBJ4_TRICV9.180e-9262.24Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2V8N0_9STRA8.730e-9162.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0XWZ9_AURAN1.260e-8863.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A0G4EGM7_VITBC1.150e-8764.44Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
B5YPA5_THAPS1.380e-8761.51Possibly a phosphatase from the CbbY protein famil... [more]
A0A6V2Q9B2_9STRA1.680e-8760.83Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:972928..978810 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.4
Seed ortholog evalue2.7e-126
Seed eggNOG ortholog2880.D7FWN8
EggNOG free text desc.pseudouridine 5'-phosphatase activity
EggNOG OGsCOG0637@1,KOG2914@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionhaloacid dehalogenase-like hydrolase family protein
Ec32 orthologEc-06_001350.1
Exons6
Model size1997
Cds size930
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3205.1prot_P-fluviatile_contig18.3205.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig18 973732..978547 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815761.2239184-UTR-P-fluviatile_contig18:972927..9737311622815761.2239184-UTR-P-fluviatile_contig18:972927..973731Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 972928..973731 -
1693563250.387506-UTR-P-fluviatile_contig18:972927..9737311693563250.387506-UTR-P-fluviatile_contig18:972927..973731Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 972928..973731 -
1622815761.30975-UTR-P-fluviatile_contig18:978547..9788101622815761.30975-UTR-P-fluviatile_contig18:978547..978810Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 978548..978810 -
1693563250.4586987-UTR-P-fluviatile_contig18:978547..9788101693563250.4586987-UTR-P-fluviatile_contig18:978547..978810Porterinema fluviatile SAG_2381UTRP-fluviatile_contig18 978548..978810 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815761.2363093-CDS-P-fluviatile_contig18:973731..9738811622815761.2363093-CDS-P-fluviatile_contig18:973731..973881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 973732..973881 -
1693563250.3992589-CDS-P-fluviatile_contig18:973731..9738811693563250.3992589-CDS-P-fluviatile_contig18:973731..973881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 973732..973881 -
1622815761.2505498-CDS-P-fluviatile_contig18:975228..9753211622815761.2505498-CDS-P-fluviatile_contig18:975228..975321Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 975229..975321 -
1693563250.4113662-CDS-P-fluviatile_contig18:975228..9753211693563250.4113662-CDS-P-fluviatile_contig18:975228..975321Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 975229..975321 -
1622815761.2615492-CDS-P-fluviatile_contig18:975904..9760511622815761.2615492-CDS-P-fluviatile_contig18:975904..976051Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 975905..976051 -
1693563250.420224-CDS-P-fluviatile_contig18:975904..9760511693563250.420224-CDS-P-fluviatile_contig18:975904..976051Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 975905..976051 -
1622815761.2727823-CDS-P-fluviatile_contig18:977089..9772621622815761.2727823-CDS-P-fluviatile_contig18:977089..977262Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 977090..977262 -
1693563250.4292953-CDS-P-fluviatile_contig18:977089..9772621693563250.4292953-CDS-P-fluviatile_contig18:977089..977262Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 977090..977262 -
1622815761.2855244-CDS-P-fluviatile_contig18:977680..9777641622815761.2855244-CDS-P-fluviatile_contig18:977680..977764Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 977681..977764 -
1693563250.438851-CDS-P-fluviatile_contig18:977680..9777641693563250.438851-CDS-P-fluviatile_contig18:977680..977764Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 977681..977764 -
1622815761.298294-CDS-P-fluviatile_contig18:978264..9785471622815761.298294-CDS-P-fluviatile_contig18:978264..978547Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 978265..978547 -
1693563250.448584-CDS-P-fluviatile_contig18:978264..9785471693563250.448584-CDS-P-fluviatile_contig18:978264..978547Porterinema fluviatile SAG_2381CDSP-fluviatile_contig18 978265..978547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig18.3205.1

>prot_P-fluviatile_contig18.3205.1 ID=prot_P-fluviatile_contig18.3205.1|Name=mRNA_P-fluviatile_contig18.3205.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=310bp
MQPFHKQGLFLSGLFAALSDGADGFIVQVSSGQSWSCLGAAGEASASALA
GASPEGQAQDLPQALIFDCDGVLADTERDGHRPAFNAAFKIKSLADCEWG
VEQYGKLLSVGGGKERMTAHWDEVGWPDCAKTAEERSMLVKELHLLKTAL
FNQAVVDGEIPLRNGVIRLVDEAINKQVPLAVCSTSNDKAVTNLVKTLMG
KERLDLIKVFAGDVVEKKKPHPDIYNLAKDTMGLDPARVVVIEDSHIGLT
AAKAAGMNCLVTKSSYTADEDFSAADAVTEELGEDGESSEAVTLATLGAI
IRRRQSVAS*
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mRNA from alignment at P-fluviatile_contig18:972928..978810-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig18.3205.1 ID=mRNA_P-fluviatile_contig18.3205.1|Name=mRNA_P-fluviatile_contig18.3205.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5883bp|location=Sequence derived from alignment at P-fluviatile_contig18:972928..978810- (Porterinema fluviatile SAG_2381)
CCCACATCCGTAATAGGCCCGCATGCTACATGTCCGGGTTTTCACGTTTT
CACCGGCCAGACCCGCCCTCATACTGCTGTCTTGGCGTGTCATCGTGCGA
GAAGACATCCAAACTTAGGAGGACAAAGAAAAACAATTAAACCAAAGAAG
CAACACATAACAAAAACGTACCAGCAGAACGGGGGGGGAAAGGGCCACTT
AATTTTTTCTTTGATTCACGGTGCATCCCAATTTGGATTCAGTTGTGCTC
AAAGGCAGCGCAAATGCAGCCCTTCCACAAGCAGGGCCTTTTCCTTTCCG
GTTTATTCGCAGCACTGTCAGATGGAGCGGATGGATTTATCGTCCAGGTT
AGCAGTGGTCAATCATGGAGCTGCTTAGGAGCCGCAGGCGAAGCTTCCGC
ATCAGCGCTTGCGGGAGCCTCTCCTGAAGGACAGGCGCAGGACCTCCCGC
AGGCCTTGATTTTTGACTGTGACGGTGTGTTGGCGGACACAGAGCGTGAC
GGGCATCGTCCTGCCTTCAACGCGGCCTTCAAGATCAAAAGCCTTGGTGG
GTAAACGTCTATTCACAGGCGCGCATGTTGACGTCACACCTGTCGTATCT
CTTCCCATAGGGAGACCACGGACCTTGTCCAGCAGCGAGATGTTGGACGT
CCTTCGGGATGAATGTGGTAGTGCCAGAGGAATGTGCTTGTTGCTCACTT
TGTACTCAAGCAGCTTTGCTGTGTTTCCACCTAAGTATTCACTGCGGTAA
CCAGAAAAAACAGGTTTGTGAAGGCAAATGATCCGCGAGTACGCGCGCGG
TAAATATGGTGCCCGGTTGTTGCTTCCCAGTGCATCAATTTGTCAGCAGG
TAGCCTACTCCGGATTCCTCCGCTCAGAATCTTGGCAGCATACTCCTATT
CTGATCAGCGGTTATCATCCCAGCTGGGGTCTGTAGCGGATATCGGTGAT
GTGTGTCCGTCCCCACTGCCTTCCCTAAGAACTGGCTCTCCTTTCTTAAT
ATCTTGTTCCCCCGAAGCAATCCACGAACACGAACCTGTGAACCAGCAGA
TTGCGAGTGGGGTGTGGAGCAATACGGAAAGCTACTGTCCGTCGGAGGCG
GGAAGGAGCGGATGACAGCGCACTGGGACGGTGCGTCTTGTGCCGGAACT
GCTGTAGCGCCTTTCAAAGCCGATTTGCGGCACCTCCGTCGAGATCACCC
CATCGCCCTTGTGATTAAGTAGGCTCAAGCCGGGAAACGCGGTGTCTTCA
GTATTGTTCGAGATTTCGCCATTTTCTCTCGCACACGCGTATTTCGTTTA
CGCTGAAGTTGGTGCTGCTGCGCTTCATTCGTGGTGATAGGGCGGCCGTG
GGGGTTGGGTGGCCGGGTGGTGGGCTAACTTTGTTGTTATCAGCGAAGCA
GGTGCAACTTGAAGAGCGAAAGCGGTAGACGGCTTGACCCGTGATCCGTT
CCCTTCGGACTGTGCTTTCAATTTTGAAGTCTAGGGGTAGGGCCATGACG
CCCGCCGTCATCTGATTTTTCATCACGAAACTTTCGTCCCTTCACCAGAG
GTGGGCTGGCCGGACTGCGCCAAGACCGCTGAAGAGCGGTCGATGCTCGT
CAAGGAGCTGCACCTCCTCAAGACGGCGCTGTTCAACCAGGCGGTGGTGG
ACGGCGAGATTCCGCTGAGAAATGGCGTTATTCGTTTGGTCGACGAAGCC
ATCAACAAGCAGGTCCCGTTGGTGAGAGAAAACGGCCGTAAGCCACGCGA
AACTGCTTCCGACTTTTTGGACTTCCGGAATATGTCAGCCGTGAGCACGA
GTCCATAATCGAAACGAAGTATTTTGCTTCGAAATCAGATGTGTCCGCTC
TACGGTGGCTAGGAACTCAGCCGTCCTTTCTTGGTAAAGTCCAGAAAATC
TCAAGCAATGAAACTGATTGTGCCATCACTTCTGCCCGGGGACCTGGATT
TTTGGCAGCAATAGGTTGGTTCGAGAGCGAAGCTCAGTGCTAGCACGAAG
TGGCCCAATGCCTTAAGGTTATCAAAGAGGCGGAGTCAGATGTGCGGAGA
GAGAGCGCCGTGCTGATGCCAACAATCCCAGGCTCACATGTTCACAACAC
AATTTGCGGTTGCTGTTTGCGGTGTCCTTCAGCTTGAATCGAGTTAAGCC
GGACTCAGCGTAGATCCTTGCAGCTCACCGACCTCAGCCAAGGTCAAGAA
AGACGCGCTTCGTAAAGGCGGGCAGCGAGTCAGTTTTACGAGTGATTCCC
AAGGGCTTGGATGCAATGAACTGCGAGTTGCGTGAAGATTACGCTGGTAG
CAGAGTTCTGGGACAAGCGAAACGAGAAGTGTCCTGCGTTGTGGCTCCAC
ATGCCCCGCAGCGCTACGCAGGATGTTGAAATGTTTCGAAAAGGTTAAAT
GCTCAAACACGGTTCCATACCTTTGGCTCACAGTTGCTCCAAGGAGTAGA
TCATGGACGCACTTGCTCTCTTTTCGAGGATTTCACCGCGTTGTTTTGTG
TGACGTGCAGCTCCATCCTTGTCTGGGGCTGTGCTGCCCTCGCATACCCC
GGCTCCCAAACAGGCGACACATTATGGAACCCGGGAGTTCATTGTCTGCA
TGCGGAAGCGCTCGCGCCCCCCTTTGATCTTGTCACCGTATTCATGCGGA
AGTACGCGCGCACCCCTTGGACCTGGGTGTTTTGCGAACCTCGTCCGCGA
AAGACAAAGGTGCATGGCTAGAATTGTCCTCGCGCACGGCGACGCTTCTT
CTGCGGCAGGCGGTGTGCTCGACGTCGAACGACAAGGCGGTGACGAACCT
GGTCAAGACCCTCATGGGCAAGGAGCGGCTAGATCTCATAAAGGTCTTCG
CCGGCGACGTGGTCGAGAAGAAGAAGCCTCACCCGGACATTTACAACCTC
GCAAAGGTATCACACGCCGCGATTTGCTGCGGTAAAAATGTGGCGACGCT
GTCGTCGCTCGTCACGAGTAGTCCGATGACGGTTTACGAAGGGATCGCGG
TCATGTTTTTTCGTCAGCTTGGCGATTTCCGCTCTACACCAAGGCCGCTT
AAGGGTTTTCTTCCCGCCGTCGGTTTCGTTTGGCGCTGTGTCCGTGACTT
GACGCACATGCCGTCTCGTTGTTCGCTGGCTGCCTCTTCGGCGTAACTTT
CGTGCCGAGGGGGTGAAGGACTTGATATTTTGATAGCAACTCGAGTAGGC
GACGTATCTCCCGGCCGCTCGAGGGTCCCGCACCGATCATCACCAGTTTT
TCGAAAATCTCCGGGAGCAGGGAAGCAGGCGACCGCCTAGAGTCCACACA
GAAGCATCAAGTGGCTGATGCACCGGGCAGACGAAAACAGCAGCCGACTC
TCCCGCAGATAGGCCATCCGGTGTTCGGATTGCCCGGTAGGCTCGGGGGG
TGAGAGCGAGGACTGGGATTTTTTTTTTTCCCGACCGGCACGCACTCTCT
CTCCGTCATCGCCCGCTTCGTTTGTGCCTTCACGCGCAGGACACGATGGG
GCTCGACCCTGCTCGCGTGGTGGTGATCGAGGACTCGCACATCGGCTTGA
CGGCCGCAAAAGCTGCCGGGATGAACTGCTTGGTGAGGAAGCAAAAGGTG
TTCCTGCTCGCCCCGGGCCCCGGCTCCCTGCCCCCCCCCCTCCCCCCACC
CACCCACAAGCGCGCGCGCGCGCACACATCCGGAGTGCGTCGTCCTCCGC
AGAATATTTCAGGGGAATGGTGGACAAAAGTTTCTGTTGATTAAAAGAGC
CCTCCGTTTGTGGCGGAACGCGTGCGAGGTGCGTCGTGCGCTGATTTCCG
CACCCAAGACCGCGGGCAATCTCGAAAACCCTGCGAGCTTGGGACGGCGG
GATGACGGTGTGGCGGAAATATTTTCTCTCCCGAACCTATACTCATGCGC
ACCCGCACCCGCACACGCGCACGCGCTTGGTGTGCCTGCGTGTGCCAATG
CAGCTGCTGTCTGCCGTCCATTGCTCGTCCGTGCGGCAGACCTGCGATGT
GCGTTGCCGCTGTGCCGGAGCCCTCGACCGCTGTTTTTTCGTTGTCTTTG
GTTTTGTAAATTTTCCGAGGGCAAATGATGTGGTGACATGAAAATGACGC
CATCGGGTCTCATAGAAGTTGGAATTCATCCAGTCTACCGGCTTGCGGTC
GTCAGTTGCCGTAATTTCGTGTGGTAGCCTTTGAGTACTTGCACTTTACT
CCCGCTGATACTTTCATGCCATGCTTTCGTGCGCGGAAAATAAGGCGGCA
ATATTGGCAAGCCGTCCTCTGCCCTCCCCTTTCCTCCCTTTCCATCGGTT
GGACGTCTTCGGGTGCAAAATTGTCAGCCGTCCCTCCCTCCCCCCCCTAC
CCCAGCCCCCTCGCGTAGGATGGATGATGGTGACGAGAGGGAGCCAGAAA
GGCGTAAGCGTGATGTTTACAAGCAAAGAAGTTGAACAATCTGCGAATAG
TGATACGGAGCCTCCGTACTGAGTGAAAGAGCGTCGCTCTGGCCCCAAAG
GGATGCTTGGTCCATCTTTGTCGAGCAACGAGGAATTGGGTGAACCCCGC
CTTACCTCTCATTCACCTACGCAAATAAGTTGTGACACCAACGAATCCAC
TCTCGAATAGTGCTCGCACCTGGCTTGGCCAGGAACGGTCGAGGCGCTGG
CTCTCCCGCCGTAGAGGGAAGCCTAGGTAGCTGAGTGAAATGCTCCCCGT
GCACATCCTGCTTTCATTCATGACTGCCCCGGTCCTACCAAGGACGATTA
GATGTAGCGGTAGGTTTGCCTCTCGAAAACCTTCTCGTCGTGAAATCCAA
TTATCCCCCGGCCGCCCCCCCCAATACCATCACCACTGCTTGCATATATT
GACACACCTCTCGGTTCGATGGCGCCCGTAGCCCCCCCACACACTCCCTC
ACTCCGCCTACTTCTGAAACGGGGCAAAGGTGACGAAGAGCTCTTACACT
GCGGACGAAGATTTTTCCGCGGCCGACGCGGTGACAGAGGAGCTGGGGGA
GGACGGTGAAAGCAGCGAGGCCGTTACGCTAGCTACCCTCGGGGCGATTA
TCCGGCGGCGCCAGAGTGTAGCCTCGTGAGGATGACGTTTCCTTATAAGT
TCAGGGAAGAGCATATCGTAGGCATCTTTTTCTCCGCTTCCCAGGCCATG
AGATTGCCGTCGTGGTACTACCGCTGTTCGTGGTTCCATATCATCTTCGA
AAAGGTCGGTGGTTGAGGCCGATGGGAGCGTGGGGGGGCGGGGGCAGTTG
AAAACCGTATCCTAACTCAATGAAGTGAAGCATGCAGCGTCGCGACCTAG
CTGGTTGGTCCATTCGCCAATTGGCTGCTGCTGTACTCCTTCGGGAGTCC
CGCGTGATCTTACAGTCGAGGGGCGGGTATGGCCATGGAACCGAAAAGGA
GCCTTCTGCGAAGATTTGCTACGGTGCCCCTGCATTGTTCCAACGAATTG
AAAAGGAGCCTTCTGCGAAGATTTGCTACGGTGCCCCTGCATTGTTCCAA
CGAATTGACCGGCGTTTTGCTCGTCAAAAACGCTCCGGCCAACAACGGGG
CAAATGGGTGTACCTTCACCAAGCGGTCGGTGGGTGGGTCCATGGCAATG
GGTTAGAGCAGCAGTGACAGGATACAGAACAAGACGCGGACTTCTGTGTC
GGGGAGGGCACCCCTCCTTGTCATGACACTTTTCAGAACGCTCGAGCTGC
AAAGAACGCACCCTTTCACCTTCCCCACCTGCAACTTGCAGCGCCGATGT
TTGGTTCAATACACGCAGCTAGCGCTGACGAGTGTGTCGGTCTTCGCGCT
ATCTTCGCCACTGCCTTGTCGCGTGTAAAACCGCTTAGCTTATGGTTTTC
CTTTGGTCGTTTGATTTCGTCTGTTGCTTCCGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig18:972928..978810-

>mRNA_P-fluviatile_contig18.3205.1 ID=mRNA_P-fluviatile_contig18.3205.1|Name=mRNA_P-fluviatile_contig18.3205.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1860bp|location=Sequence derived from alignment at P-fluviatile_contig18:972928..978810- (Porterinema fluviatile SAG_2381)
ATGCAGCCCTTCCACAAGCAGGGCCTTTTCCTTTCCGGTTTATTCGCAGC
ACTGTCAGATGGAGCGGATGGATTTATCGTCCAGGTTAGCAGTGGTCAAT
CATGGAGCTGCTTAGGAGCCGCAGGCGAAGCTTCCGCATCAGCGCTTGCG
GGAGCCTCTCCTGAAGGACAGGCGCAGGACCTCCCGCAGGCCTTGATTTT
TGACTGTGACGGTGTGTTGGCGGACACAGAGCGTGACGGGCATCGTCCTG
CCTTCAACGCGGCCTTCAAGATCAAAAGCCTTGATGCAGCCCTTCCACAA
GCAGGGCCTTTTCCTTTCCGGTTTATTCGCAGCACTGTCAGATGGAGCGG
ATGGATTTATCGTCCAGGTTAGCAGTGGTCAATCATGGAGCTGCTTAGGA
GCCGCAGGCGAAGCTTCCGCATCAGCGCTTGCGGGAGCCTCTCCTGAAGG
ACAGGCGCAGGACCTCCCGCAGGCCTTGATTTTTGACTGTGACGGTGTGT
TGGCGGACACAGAGCGTGACGGGCATCGTCCTGCCTTCAACGCGGCCTTC
AAGATCAAAAGCCTTGCAGATTGCGAGTGGGGTGTGGAGCAATACGGAAA
GCTACTGTCCGTCGGAGGCGGGAAGGAGCGGATGACAGCGCACTGGGACG
CAGATTGCGAGTGGGGTGTGGAGCAATACGGAAAGCTACTGTCCGTCGGA
GGCGGGAAGGAGCGGATGACAGCGCACTGGGACGAGGTGGGCTGGCCGGA
CTGCGCCAAGACCGCTGAAGAGCGGTCGATGCTCGTCAAGGAGCTGCACC
TCCTCAAGACGGCGCTGTTCAACCAGGCGGTGGTGGACGGCGAGATTCCG
CTGAGAAATGGCGTTATTCGTTTGGTCGACGAAGCCATCAACAAGCAGGT
CCCGTTGAGGTGGGCTGGCCGGACTGCGCCAAGACCGCTGAAGAGCGGTC
GATGCTCGTCAAGGAGCTGCACCTCCTCAAGACGGCGCTGTTCAACCAGG
CGGTGGTGGACGGCGAGATTCCGCTGAGAAATGGCGTTATTCGTTTGGTC
GACGAAGCCATCAACAAGCAGGTCCCGTTGGCGGTGTGCTCGACGTCGAA
CGACAAGGCGGTGACGAACCTGGTCAAGACCCTCATGGGCAAGGAGCGGC
TAGATCTCATAAAGGTCTTCGCCGGCGACGTGGTCGAGAAGAAGAAGCCT
CACCCGGACATTTACAACCTCGCAAAGGCGGTGTGCTCGACGTCGAACGA
CAAGGCGGTGACGAACCTGGTCAAGACCCTCATGGGCAAGGAGCGGCTAG
ATCTCATAAAGGTCTTCGCCGGCGACGTGGTCGAGAAGAAGAAGCCTCAC
CCGGACATTTACAACCTCGCAAAGGACACGATGGGGCTCGACCCTGCTCG
CGTGGTGGTGATCGAGGACTCGCACATCGGCTTGACGGCCGCAAAAGCTG
CCGGGATGAACTGCTTGGACACGATGGGGCTCGACCCTGCTCGCGTGGTG
GTGATCGAGGACTCGCACATCGGCTTGACGGCCGCAAAAGCTGCCGGGAT
GAACTGCTTGGTGACGAAGAGCTCTTACACTGCGGACGAAGATTTTTCCG
CGGCCGACGCGGTGACAGAGGAGCTGGGGGAGGACGGTGAAAGCAGCGAG
GCCGTTACGCTAGCTACCCTCGGGGCGATTATCCGGCGGCGCCAGAGTGT
AGCCTCGTGAGTGACGAAGAGCTCTTACACTGCGGACGAAGATTTTTCCG
CGGCCGACGCGGTGACAGAGGAGCTGGGGGAGGACGGTGAAAGCAGCGAG
GCCGTTACGCTAGCTACCCTCGGGGCGATTATCCGGCGGCGCCAGAGTGT
AGCCTCGTGA
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