mRNA_P-fluviatile_contig17.3088.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig17.3088.1
Unique NamemRNA_P-fluviatile_contig17.3088.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A6H5JDK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDK4_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 1.340e-119
Identity = 186/289 (64.36%), Postives = 219/289 (75.78%), Query Frame = 1 
Query:   85 LLGCGALVAAVRGEDACLAESCPVTANAFADDEFMVCNVGSSCRDEYNEANGTEHEIWPAAALSLARRRLEAERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTRSPRYIQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQTGWDLTAFDVRAAASEGDRKKRRE 951
            L+GC  L+A    ED    ESC V  + F +DEF VCNVGSSCR EYN ANGT +++W    + +  +R+ +ER+RVMLNEYQP   PKFTE+GYKKEKL+P+TY  L+ WY  + E+  P  E W  DNTYVNHW+VDT MT +P  I   L+ +LLP MEEWSGIKL+ST+CYGVRHYYRG+ILANHVDRVDTHVIS IIN   ENVDT W LYVRGHDGVAR LFIEPGEIIFYESASVIHGRP+AF+G RFANIFVHF+P  GWD+T  DV+ AA+ G  +K  E
Sbjct:   11 LVGCVLLLAKAGAEDP-PPESCQV--DVFPNDEFAVCNVGSSCRGEYNRANGTLNKMWQEE-IGIVWKRINSERSRVMLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHSQMENKAPVTEKWAPDNTYVNHWEVDTKMTAAPTRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN---ENVDTDWGLYVRGHDGVARDLFIEPGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTTKDVQRAANLGKTQKGHE 292
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: D7FHL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL7_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 2.720e-102
Identity = 169/289 (58.48%), Postives = 199/289 (68.86%), Query Frame = 1 
Query:   85 LLGCGALVAAVRGEDACLAESCPVTANAFADDEFMVCNVGSSCRDEYNEANGTEHEIWPAAALSLARRRLEAERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTRSPRYIQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQTGWDLTAFDVRAAASEGDRKKRRE 951
            L+GC  L+A    ED    ESC V  + F +DEF VCNVGSSCRDEYN ANGT +++WP     +A +R+  ERNRV LNEYQP   PKFTE+GYKKEKL+P+TY  L+ WY  + E+  P  E W  DNTYVNHW+V T MT +P  I   L+ +LLP MEEWSG KL+ST+CYGVRHYYRG+ILANHVDRVDTHVIS IINVEQ                        PGEIIFYESASVIHGRP+AF+G RFANIFVHF+P  GWD+TA  V  AA  G  +KR++
Sbjct:   11 LVGCVLLLAKAGAEDP-RPESCGV--DVFPNDEFAVCNVGSSCRDEYNRANGTLNKMWPEET-GIAPKRINGERNRVKLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHGQMENKMPVTEKWALDNTYVNHWEVGTKMTTAPMRIHRRLYQDLLPVMEEWSGTKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ------------------------PGEIIFYESASVIHGRPQAFQGSRFANIFVHFSPAEGWDVTANTVERAAKFGKTQKRQQ 271
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A7S2UT49_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT49_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.410e-43
Identity = 90/222 (40.54%), Postives = 132/222 (59.46%), Query Frame = 1 
Query:  244 EHEIWPAAALSLA-------RRRLEAERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTRSPRY--IQNLLFDELLPEMEEWSGI-KLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQ 879
            EH  W    L +        RR+   +R R+  N+  PSI P FTEVG++K +  P+ ++ +  +Y    EH+   +EVW + NTY NH++  T M   P    ++  +F  L P +EEWSG+ +LE T+CYG+R Y  GA L  HVDR+ TH IS IINV+Q+ V+ PW L++  H G A  + + PG+++ YESAS  HGRP   +G+ + N FVH+ P+
Sbjct:  252 EHPDWHQKRLGMVKNWDHVYRRQNATDRERIRHNKEHPSIVPHFTEVGFEKVRTPPDVWEMIQTYYHANKEHTA--LEVWDDSNTYTNHFESPTYMIHLPENGRMKPEIFRRLQPYLEEWSGVDELEGTACYGIRVYQEGAELRGHVDRISTHAISVIINVDQD-VEEPWYLHIYDHSGSAHNVTMAPGDMVLYESASCQHGRPFPLKGNYYTNTFVHYRPK 470
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: K0RWS5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RWS5_THAOC)

HSP 1 Score: 169 bits (428), Expect = 1.100e-40
Identity = 89/204 (43.63%), Postives = 122/204 (59.80%), Query Frame = 1 
Query:  295 EAERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYT--REFEHSEPEV--------EVWPEDNTYVNHWKVDTAMTRSPRYIQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTP 876
            ++E  R+ +N  QP     +TE+G+KK +   E    L  ++   R F H +  V        E W + +TYVNHW   T M    + +++L +D   P +EEWSG++L  +S YG+R Y +GAILA HVDR+   V+S +INV QE V  PWPL + G DG A  +  +PGE+I YES S+IHGRP  F GD FAN+FVHF P
Sbjct:  171 KSEAERLSMNLRQPQSMRNYTELGFKKIQAPNELVSRLTKFWNDGRNFRHLQENVVQAPNVNFERWEDGSTYVNHWTSPTMMMNLDQSLRDLTWDTTKPILEEWSGVELVQSSLYGIRIYKKGAILAPHVDRLPL-VLSAVINVAQEGVKEPWPLELIGRDGRAYNVTCQPGEMIMYESHSIIHGRPFPFSGDNFANVFVHFEP 373
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A835YWU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWU1_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.960e-40
Identity = 89/230 (38.70%), Postives = 135/230 (58.70%), Query Frame = 1 
Query:  193 CNVGSSCRDEYNEANGTEHEIWPAAALSLARRRLEAERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTRSPRY--IQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTP 876
            CN+ +    E  E    E EI         R R + E+ RV  N  QP   P+FT+VG+KK ++  + +  L+ +Y +  ++  P++E W + N Y N+ +  + M   P    ++  +F+ L P +EEWSG++L STSCYG+R Y RG+ LANHVD   TH IS IINV+QE V+  WPL +  H G    + + P +++ YESA+ +HGRP  F+G  +AN+F+H+ P
Sbjct:  237 CNIENCGIVERKEVELDEEEI---------RAREQNEKFRVRNNVQQPVGLPRFTDVGFKKIRVPDDVWDMLVTYYRQNKQN--PKIERWGKGNVYTNNLEAPSYMVNLPETGPLKPAIFNGLRPILEEWSGVELVSTSCYGIRAYTRGSWLANHVDTRATHTISAIINVDQE-VNKDWPLNIFDHAGNDHNITMAPRDMVLYESATCVHGRPSTFDGQFYANMFIHYKP 454
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A7S4KHC4_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KHC4_9EUKA)

HSP 1 Score: 162 bits (411), Expect = 2.260e-40
Identity = 87/204 (42.65%), Postives = 120/204 (58.82%), Query Frame = 1 
Query:  289 RLEAERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTRSPRYIQNLLFDELLPEMEEWSG--IKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQTGWDL 894
            R E E+ R+ LN  QP   PKFTEVGY   KL    +  L  +Y  + +H +   E W   + +VNHW+  T M    + ++  + D  +P +E W G    LE T+ YG+R Y   + L NHVDR  TH +S II V+Q+  D  W L V GHDG   +L + PG+++ YESASVIHGRP+   G+ +AN+FVHF P+ GW+L
Sbjct:  153 RKENEKRRIWLNRNQPLKTPKFTEVGYAYSKLSDSLFDDLFNYY-HDNKHRQT-FENWRPADHHVNHWESPTYMLPLTQSLRQRVIDYCVPILETWIGGETPLEFTALYGIRTYSNESYLLNHVDRSATHAVSVIIQVDQKVTDD-WLLEVHGHDGKVEELPMAPGQMVLYESASVIHGRPKPLNGEYYANVFVHFRPKNGWNL 353
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A7S2MSB8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSB8_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.440e-39
Identity = 83/196 (42.35%), Postives = 118/196 (60.20%), Query Frame = 1 
Query:  310 RVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTRSPRYIQNLLFDELLPEMEEWSG-IKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQTGWDL 894
            R+ L++ Q    P  TE G+ K++L P T+  +  +Y   +  S    E   +     N   + T  T  P  +QN +F EL   ME W+G +KL+ TSCYGVR Y  G+ L  HVD   THVISGI+NV QE V  PWPL +  H+G   ++ ++PG+++FYESA ++HGRP+  EG  +ANIFVH+ P+ GWD+
Sbjct:  296 RMALSDVQSHFVPSLTEEGFYKDRLPPTTFARVTKFYEENYNTSMTNEEY--DGGPLYNQRTIPTYHTPLPHRLQNDIFMELKDLMEVWAGGMKLKGTSCYGVRTYSPGSYLHLHVDTAQTHVISGIVNVAQE-VSKPWPLEILDHEGKLHEVNMDPGDLLFYESAKLLHGRPQPLEGQFYANIFVHYVPEKGWDV 488
[Close]
BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A7S2THP0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THP0_9EUKA)

HSP 1 Score: 159 bits (402), Expect = 4.810e-39
Identity = 84/238 (35.29%), Postives = 119/238 (50.00%), Query Frame = 1 
Query:  181 EFMVCNVGSSCRDEYNEANGTEHEIWPAAALSLARRRLEAERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTRSPRY-----IQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQ 879
            +F V   G  C + Y E    E          L         +R   N  QP     FTE+G++K K+  + ++ L  +Y  E       +E WP  N Y+NHW+    M   P        +  +F+ L P +EEWSG +LE T  YG+R Y     L NHVDRV THV+S I+++  +  D PWPL +  H G    + I PGE++ YESA+ +HGRP  F+G+ + N F HF P+
Sbjct:   94 QFSVAQCGHPCHEHYGEEPCLERLDGRIRRAQLQPVWDSQNEDRRQTNRIQPQNLKNFTELGFEKRKIPDDVWELLRSYY--ENNKDSIVLEKWPSTNPYINHWESVPFMIWLPELHTGDETKRKIFEGLRPHLEEWSGTELEHTDLYGMRVYKNNTFLENHVDRVATHVVSAIMHIADKQ-DIPWPLNIYDHYGNEHNITISPGEMVLYESATCVHGRPSLFQGEYYVNAFAHFRPK 328
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A7S1YWR3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWR3_TRICV)

HSP 1 Score: 153 bits (386), Expect = 1.780e-38
Identity = 79/201 (39.30%), Postives = 122/201 (60.70%), Query Frame = 1 
Query:  301 ERNRVMLNEYQPSIAPKFTEVGYKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTR--SPRY------IQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQ 879
            E +R+ +N +QP +   +T +G++K +   + Y+ L  ++      +    E W E +TY+NHW + T M    +PR       ++  ++D     ++EW G  L ++S YG+R Y RGA+LA HVDR+   V S IINV+Q+ V+ PWPL V  HDGVA  + +EPG+++ YES SV+HGRP   +G  +AN+FVHF P+
Sbjct:   17 ESDRISMNLWQPRLMQNYTTLGFRKVRAPEKVYRLLRAFWRAN--RNSRLTEAWSEGDTYLNHWDMPTQMVNVDNPRLSGGGKELEWKIWDATREAIQEWIGKPLSTSSVYGIRIYRRGAVLAPHVDRLPL-VSSAIINVDQD-VNAPWPLEVIAHDGVAYNVTMEPGDMVLYESHSVVHGRPYPLQGSFYANVFVHFEPE 213
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BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Match: A0A553N9C6_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553N9C6_TIGCA)

HSP 1 Score: 155 bits (392), Expect = 2.540e-38
Identity = 82/193 (42.49%), Postives = 117/193 (60.62%), Query Frame = 1 
Query:  322 NEYQPSIAPKFTEVGYKKEKLDPETYKALLVW---YTREFEH----SEPEVEVWPEDNTYVNHWKVDTAMTRSPRYIQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVDTHVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIHGRPEAFEGDRFANIFVHFTPQ 879
            N  QP   PK T+ GY+K K+  E Y+ LL     +   +E+    +    +   + + + +   V    +R P  ++ ++   L P +E+WSGIKL  T  YG R Y RGA L+ HVDR+ THV+S I+ V+Q+ VD PWPLY+  H+ V +K+++EPGE++FYESA + HGRPE F G  F NIFVHF PQ
Sbjct:   90 NLLQPRYVPKLTKTGYRKIKIPDELYEFLLEQRNIFDLSWENCGHGAHQNCDRRLDGDKFESKENVQLVGSRRPNLVKKVVQQTLEPLLEKWSGIKLTPTLVYGFRRYLRGAWLSLHVDRLHTHVVSAILQVDQD-VDQPWPLYLVDHEDVTQKIYLEPGEMLFYESAKLPHGRPEPFNGHYFDNIFVHFKPQ 281
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig17.3088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDK4_9PHAE1.340e-11964.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHL7_ECTSI2.720e-10258.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UT49_9STRA3.410e-4340.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K0RWS5_THAOC1.100e-4043.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A835YWU1_9STRA1.960e-4038.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4KHC4_9EUKA2.260e-4042.65Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A7S2MSB8_9STRA1.440e-3942.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2THP0_9EUKA4.810e-3935.29Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S1YWR3_TRICV1.780e-3839.30Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A553N9C6_TIGCA2.540e-3842.49Uncharacterized protein n=1 Tax=Tigriopus californ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig17contigP-fluviatile_contig17:2728828..2735708 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score171.0
Seed ortholog evalue8.6e-40
Seed eggNOG ortholog159749.K0RWS5
EggNOG free text desc.Ankyrin repeats (3 copies)
EggNOG OGs2DE90@1,2S5PQ@2759,2XEV1@2836
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_004100.1
Exons6
Model size2567
Cds size927
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig17.3088.1prot_P-fluviatile_contig17.3088.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig17 2728894..2734134 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815744.8746424-UTR-P-fluviatile_contig17:2728827..27288931622815744.8746424-UTR-P-fluviatile_contig17:2728827..2728893Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 2728828..2728893 +
1693563158.411235-UTR-P-fluviatile_contig17:2728827..27288931693563158.411235-UTR-P-fluviatile_contig17:2728827..2728893Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 2728828..2728893 +
1622815744.9608233-UTR-P-fluviatile_contig17:2734134..27357081622815744.9608233-UTR-P-fluviatile_contig17:2734134..2735708Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 2734135..2735708 +
1693563158.4742608-UTR-P-fluviatile_contig17:2734134..27357081693563158.4742608-UTR-P-fluviatile_contig17:2734134..2735708Porterinema fluviatile SAG_2381UTRP-fluviatile_contig17 2734135..2735708 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815744.8863118-CDS-P-fluviatile_contig17:2728893..27290101622815744.8863118-CDS-P-fluviatile_contig17:2728893..2729010Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2728894..2729010 +
1693563158.420623-CDS-P-fluviatile_contig17:2728893..27290101693563158.420623-CDS-P-fluviatile_contig17:2728893..2729010Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2728894..2729010 +
1622815744.8963668-CDS-P-fluviatile_contig17:2730429..27306061622815744.8963668-CDS-P-fluviatile_contig17:2730429..2730606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2730430..2730606 +
1693563158.4286215-CDS-P-fluviatile_contig17:2730429..27306061693563158.4286215-CDS-P-fluviatile_contig17:2730429..2730606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2730430..2730606 +
1622815744.9090514-CDS-P-fluviatile_contig17:2731146..27313231622815744.9090514-CDS-P-fluviatile_contig17:2731146..2731323Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2731147..2731323 +
1693563158.4398034-CDS-P-fluviatile_contig17:2731146..27313231693563158.4398034-CDS-P-fluviatile_contig17:2731146..2731323Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2731147..2731323 +
1622815744.9199915-CDS-P-fluviatile_contig17:2731990..27321551622815744.9199915-CDS-P-fluviatile_contig17:2731990..2732155Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2731991..2732155 +
1693563158.449125-CDS-P-fluviatile_contig17:2731990..27321551693563158.449125-CDS-P-fluviatile_contig17:2731990..2732155Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2731991..2732155 +
1622815744.9352934-CDS-P-fluviatile_contig17:2732904..27329761622815744.9352934-CDS-P-fluviatile_contig17:2732904..2732976Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2732905..2732976 +
1693563158.45808-CDS-P-fluviatile_contig17:2732904..27329761693563158.45808-CDS-P-fluviatile_contig17:2732904..2732976Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2732905..2732976 +
1622815744.9458344-CDS-P-fluviatile_contig17:2733915..27341341622815744.9458344-CDS-P-fluviatile_contig17:2733915..2734134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2733916..2734134 +
1693563158.4662993-CDS-P-fluviatile_contig17:2733915..27341341693563158.4662993-CDS-P-fluviatile_contig17:2733915..2734134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig17 2733916..2734134 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig17.3088.1

>prot_P-fluviatile_contig17.3088.1 ID=prot_P-fluviatile_contig17.3088.1|Name=mRNA_P-fluviatile_contig17.3088.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=309bp
MRLVAALLGCGALVAAVRGEDACLAESCPVTANAFADDEFMVCNVGSSCR
DEYNEANGTEHEIWPAAALSLARRRLEAERNRVMLNEYQPSIAPKFTEVG
YKKEKLDPETYKALLVWYTREFEHSEPEVEVWPEDNTYVNHWKVDTAMTR
SPRYIQNLLFDELLPEMEEWSGIKLESTSCYGVRHYYRGAILANHVDRVD
THVISGIINVEQENVDTPWPLYVRGHDGVARKLFIEPGEIIFYESASVIH
GRPEAFEGDRFANIFVHFTPQTGWDLTAFDVRAAASEGDRKKRREARMVR
PPQAPEVA*
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mRNA from alignment at P-fluviatile_contig17:2728828..2735708+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig17.3088.1 ID=mRNA_P-fluviatile_contig17.3088.1|Name=mRNA_P-fluviatile_contig17.3088.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6881bp|location=Sequence derived from alignment at P-fluviatile_contig17:2728828..2735708+ (Porterinema fluviatile SAG_2381)
CTCCGCGGACACGATCGAGGCTAGCTGGACACAGCCTCCCGCTCTCCAGC
AGTTTGGCAGTTGAAGATGCGCCTGGTGGCAGCCCTCCTTGGATGCGGAG
CCCTTGTAGCAGCAGTGAGGGGTGAGGATGCTTGTCTGGCGGAGTCTTGC
CCAGTGACAGCCAACGCCTTCGCGGACGATGAGGTGTGTGTGTGTGGCGC
CTCGCGTAGCCGTAGCTTTGCTTTCCAAGGCACTTTCGAAATTTGCGCAA
TGAAGAGCAGTGAAGTTAAGCCCGTCAAGAGGTCCGTGGCGTTATGTTTC
TCCCTGCTGTAACCATACGCTCTCGCTTGGTCGGTCGCCACAATCTTCCC
GAATCCCGTGTGCGGATACTCCGCGGGTTTTAGGGGCTTTGTAGGACTCA
ACCAAGAGGTAGGAAGCCCCTCCCACTTCCCCGCCGCCGCCCCGAAACAG
CTGCAGGGCAGGTCGGATAGTCCATTGAATCTCACCGACGATGGCATGGA
TCAGCGGTAGTCCCGTTCCAAGCGTAAGGCGATCCCCTTTTCCAGGTTTT
TGAGTTTTTGCAATGACACTCGCACAACTTCAGCGAACCAAATTCCGCGA
TGTACTTCGATCTGAAAGTGTGTGGAAAGCGGCGACAGCGGTTATGTCCT
TCCAAGTGCAATTTAAAGTCCAAACAACTATTCAGATGGGGAACAAGCAA
ATGATTGTGGTGTTCCTTCGGTTCTCGGCGTGAGCCTCTCGTGATGAGTA
TCGTCGGCCCCAAATGTCTTCCTCCATGTCTGCCTCCGGACACTCATCTT
GAGCATGTAAGAAGTGTACCCTTGATACGACTGAACTTGGTCCCTATCAT
CTCTCACGGAAGGACGGCAGCGTGAGCGGCCTCGACCCCACCCGCAAAAA
TGATAGTGGTTTCCGCATACATGCGATTTCCAAGCGAGACGACTGCTGTC
TTCGGATATCTGGACGACGGCAGAGCAAACGAAGGATCCCATTCCAAACC
CCACCCTTGCGCTGGCTCTATTTTTTCTGCTCATTTGTTAGAAAGAGGGC
ATGCATTCATTCCGCAGTTGGAGTCCCGACCCTCTGTGACCATGCCACCA
TTGGCCGCGACTTGCGTCTTGGCGTGCTCAGAACTGCTGCTGGGGTGGAG
GTAGTGTAACAAATTGAACGACGCTGCTTTTCCCCCCATGATCATTGATC
TTGTGCCCTTTGTGGTGGTCATTCCAGGCAGCTGGGGTGGCATGAACTAC
TGCTGTCGCCTCGTAGTTCCAGGGGATGCGGGTTTGTGGCGGCGAGCGCA
GCAGTGCGGTGTTGGTCCAGGTTGCGCACTTTTTGAGCCACTGATGCCGC
GCCCTTCCATGTCTTGAGCCCCAGCATCAGGCATAGAGCGTTTGGGGTGG
TGCGCATAAACGCCGCGGCTTGAGTCGAGGCACAAGAGATGAAGAGGCGG
GATATTGTTCGGTGCGTATGCCAGGTTGATCTCAACCAACATGCGGACTG
TCTTTCATCTCTCATATCGCTGCCGCCGCTTTTTCTAACACGGCCGCCGT
TCATCTTTGCTACTTTAAAACCTTCAAAACCAACCTTGCACAACCACACC
AGTTCATGGTGTGCAACGTCGGGTCCTCGTGCCGGGATGAGTACAACGAA
GCCAATGGCACGGAGCACGAGATTTGGCCGGCCGCGGCCCTCAGCCTGGC
GAGAAGACGGTTGGAGGCAGAGCGGAACCGGGTGATGCTCAACGAATACC
AGCCAAGCATAGCGCCGAAGTTCACCGAGGTGAGGCGACCGCCAGTTGGA
GATATAATGGAGGAGAGGGAGAAATCGCAGGAGAGCGGAGAGATAGACTA
TGAGAGGGGGGATGGAGAGGAGAACGGAAGGAAGGAGAGGAAAGGAGCGG
AGAGGAGCGCGGGCGGGGTCCCAGGAGGAGAGAGAGGCGATCAAGAGAAA
AGAGAGTAGAGAAGAGCAGCGGAGAGGGCAAAAGGGAGCGGAGGGGAGAG
CACGAAAGCAGAGATGCCGATGACGGGATATGGGCATTCACTTTTTGTTC
GGTTCATGTTTTGTCGTGATGGCGAGAGCCTGCGTTCGGTGGGGAGCGCA
TTATTGCGTATTCGCAGGGTGCAACACTCCCGTTGCCTCTGATGTTCTAT
CGTCGTGTCCGTACTTTTTCGCGCTCATGCACCAGTGCTTTTGCGGGGGT
TCGTGTTGTGCTATTGAAGCGCGTGCTGCGAACTGCCGTCCCCTTGTTGT
AAACTCCTGAACCACCCGTACGCTGATAGTCAACGGCGATGACGCCACGA
TTGACCTGATCAAGGACAGGTCGGATACAAGAAGGAGAAGCTCGATCCTG
AGACCTACAAGGCCCTCCTGGTCTGGTACACTCGAGAGTTCGAGCACAGT
GAACCAGAGGTCGAGGTGTGGCCGGAGGACAACACGTATGTCAACCACTG
GAAGGTCGACACCGCCATGACGCGCTCTCCGCGTTACATCCAAAATGTAA
GTTGAGAGTGAGACTTAGAGGGCGGGCAAGGTTAAAGTGGGAGACCCTCT
CAAGTGCCGGGGTGGGACGGGAAAATCGCCCGAAGCGGGCACCCGTAACA
GTTGGCTTAAGTGTGTGAAAGAGATGTCGTGCTTCGTGTCAATCGACCTC
ACTACACCGGGGACCCGCACTACTCAACTCGCGCTATGCGCGGGGGCCCA
CTGTTTTGGACGGGCCTTTTGTTTGGCCCGCGTCGGCTTAGGTGCTGAGA
CCTGACCCCGGAAAATGGAGGTTCATCGATTCACACGGCCTCTCGACCCT
TGAGGGAAAGGATGGACATCAAATTTCATTCCAACTGCCCTTTCCCGGTT
CAGTGGGACCTCATTTGCCCCAAGAGCGTGGCACCTCGTCGCTTCTCACT
ATATAACAAAAGCACGATGATCTCTTGACGAGTCAGAGGCTGACTGGTAG
TTCAATGGTCGTCGCGCATCTTCACGAAGGCTTGCGCCGAAATCCGTTCA
CAACTGATCCTGTCTCACCTCAATATCATCTTGTGCACCCGAAGTCAGCT
TACTGCTTTATCGGGTGGGGCGGACTGTTGGACTCGCCTCGACGCGGCGG
CGCGCTCTCCCTTGTTTGTGCTTTGTCTCTCGTCTTTCCGCGGAACTTGG
TTGGAAACTTCAGCTCCTTTTTGACGAGCTGCTGCCCGAGATGGAGGAGT
GGTCGGGCATCAAGCTGGAGTCGACTTCGTGTTACGGCGTGCGGCACTAC
TATCGGGGCGCCATTCTAGCCAACCATGTTGACCGCGTCGACACTCACGT
GATATCCGGCATCATCAACGTGGAGCAGGTGTGTGTGCACAACAAGCGGC
CCAATACGAGATCTCTCCGTGGCGCGGCTTCGTACTGTGCCCTGGTGGTA
TTGGTTGGGCAAGTCTGAGGCGTGTTGATATTCCGTGCACCATCTTAGCC
GGAAAACGCCCAAGCTGCTCATGTTGGGGGAGGTATACGTGGTACGGCAT
TGATGTCGATCGTAGTGGATGGGTTGATTTATTTTGTCTGGACACTCCTG
AAATGATGGCGAGCTGGGCAATCTCACCCCGCCTTGGCCTTCGTCTTTTC
CATTATTCACCCGAACAGCCGGCGCCTATGCCTTCCTAGCATGGCCATGC
AGCCCCGGCAAGTTCTCATTCCGCCGAGCCGGAAGACAAAGCGGTTGAGG
CATAAATTTGTGTCTCTGTTTTGCTAATTTTCAAACAAGACGTCGAAAAT
TTGTTCGTGTTTGTGGGGGTAATGCTGACACTGTGATAGCGCAGGAATTC
GCGATGCGGTGCGCTTTGTCTCGGTTTACGAGTCGCGTGTGCACGGGTAG
TGAACGTGTGCAATTGAATGATTTTTTTTCATGAATAGATGTCCTTTATA
GATGTTGTTCCTGCAGAAACAGACAAAAAACGAGCGCTTCGAGTCACGAG
TTCAAGCGCCCACGTTGGCAATCAGCTTGTCGACTGGAACACTCCGGTGC
CATTCGAAGAACCTACTTCCTCGATTCAAATCGAGTGGCTTGTTCGTTTG
TGCTCCGATGACATTGCTTCATGGCAGGAAAACGTGGACACCCCTTGGCC
CTTGTACGTTCGTGGACACGACGGTGTTGCGAGGAAGCTGTTTATTGAGG
TAAGCATCGGATCGTTCCTGGAGGAATCGTCCCTCGTCAATCGCGGGTTT
TTTGCCTTGGATGCAACTGCTGCGATGGCTCTTACCCTTGCTTCTCCCAT
TCGCAGTTTCTCAGAACTTTCCCAGCGACTGGACACCTGTCGGTGAGATG
CATGAGATTAAGATTCGCGGTGTGTCTGGTGGTGTATTGCATGGTGATTT
GGTGATTCGGTGATTTCTTTTTGCGCTGTCTAGGTCAGCAAGTGTCCTAC
TTCGGGTGTGAACCAACAAGTCGCCGAAGCGCATGTGCGGCTCACCCACC
AACGTGTCTCTGAAGCATGCTTGAATTATGAGATGGCATTATTGGAAGGG
AGCGTTCCCCAATCCGAGGTGCTATTGGTGAATGTGGCCGCGCGAAAAGC
CTCCACCGAAATTTACCGACCTACGATCAAGCATTCGCGTTAGATGTGTC
AAAAAGGTGATGATAATAGCAGTGCATCGTGATCATCCTCGAATTCGGTA
CCACAGGATGTAGCGGGTGGCTGCAGCTGAAGAGTTTTCACAGGCTCTAA
ACAGATTCGTTTCGTTATTGTATTGCGTGAAGGGGTTGAAGCATTTCGGC
TACTGCGGTTACTGTGCATGTACCAAGGGGGGTGAGACACTCTAGCTAGT
GCGATCGGCACTACGCTGACTTTGCGCCGAGTGACTGAGGTGCTGGCTGG
CTTCCTCACAGCCATGAAACGTCATGCATGGAGAAGACCACGCGGAAGAA
ACGCCAGTATTTTGTCCCAACACAAACCATCCTCTCCTGCCATTAGTGTG
TAACCTTGCTTGAGCCCCTAGCATCTCATATCGCCATACCACCGCCCTCT
GTTTCTCGCACCGCACTGACGTACAACAAACCAAAACTCCCCCGGCCTCC
CGCCTCCCTCCCGCTCTCCCCCCCCAAAAAATAAACAGCCCGGAGAAATC
ATCTTCTACGAGAGCGCGAGCGTTATCCATGGTCGCCCGGAGGCCTTCGA
GGGGGACAGGTTCGCCAACATCTTCGTGCACTTCACGCCTCAGACGGGAT
GGGACTTGACCGCTTTCGACGTCCGCGCCGCCGCCTCAGAAGGCGACCGG
AAGAAGCGTCGGGAGGCGAGGATGGTCAGGCCTCCGCAGGCTCCGGAGGT
CGCATGAGGTGGAGGAAGGAAAGGATGGGGCGACGCGCCGACTTTTCAAG
GAAGGGATGGAAGGGGCGACGTGCTGTCTTCGTAATAGAGGGAAGGGAGG
GAGGAGGTGCGCTGGCTTTATGAAGTAGGGAAGGGAGGGAGGAGGTGCGC
TGGCTTTATCAAAGAGGAAAGGGAGGGAGGTAACGCTGGCTCAATGGAGG
AGGACCGTAACGCGGTGCGCTTTCTTTCTTGCTCTTCTTTCTAGCTTCTA
GATCCTTCTAGATCCTTGTAGATGTGTATTTTTGCGTATGCCGGCTCGGG
GCCATGTTTGCGGAACTTGTGAAGCGTGCCGCAGGTGCTTTTGCCCCGTT
GTGTTGTATCCGATGTGTGGTTGTCACTAACCCGAACCCGAACCTCCCTA
CTGCATCACCCTTCGTCGCGGTTTCCAACCGGGATCTCTGAAAACTAGGC
ACGCCCCAGAGATGATAATTCCATCGTATTCCGAGCCGGGAGTGATGTTG
GAATGGCTTGGCTGGGGTCTCCCCCTGAGTTTGTACAGTGCAACTCCAAA
CGTTTTTGCCACTTTTTGTCTTCAAATGTCTGTGCTGTTACGGTTAGGAA
AGGAAGAATCCGGTTTTATGGAAGTTAGCTTGCACCGAGGGTTGAGCTCT
TTCTTTTTTTTGTCTTGTGCGAAGGGTTCGGGTAAGGGTTAGGTCATGGT
TTGGTGCGGCTAGGCCCTTCGTGAGCTTGTGTATCGCACCGCACCTGAAG
AAGTACCTAAGTGCGTTCGTTGCCGCGCGTCTCCAACTGTATGGTTATTG
TTTTTTTCTAATCGCGCCAAGAAATGGATGCAGCCTTCGCGCCCGCGTAG
AGTTCCTGAGTAGAGTTCGGGCTAAGACAAGTGGTCGTAAGGCACGAATT
GCTTCAAACTATTTTGTCACAATATTCGAACATTTTGTTGGATGCATAGC
GCGCTGCGCCGTGGCGTGCTTAATCAGAGCGCCGCAACGAGAACGTCGGG
TGCACGTATTATTCTTCGCGGCGTCAAACGATGCACTCGTCTTGAGGGCG
TCGGAAAGTCCTCATATACTCGGCAGCCTTTTGTCATGTATCACTCTCTT
CTTGAGGCGCGCCTAGGATCGTCCAAGGGGCAGGCGGTGCAACAGCACCT
GAGGACCGTCCTGTCGGAGTCGGCAGTGCGGACCTGCCGGCCCTCCTGGG
CGTGATGTTCGTGAAGTCGGTTGTTTTTTCTCTCGCGATGGCTTTCCGCC
CAACACCAAGGAATGGAGGACGGTGCACCGGGGTCTTTTTTGGCTTGTTG
GAGAATCTGTGGTGGTGGTCTGCACCGATCGTTAAGGAAGTGCAAGATAT
CTTCACCCTGAAACCTGTTGGATTTCGAGAACTTTGAGCGAACTCGTGCG
TTGAAGTGATCCGCCTGGGTGTGCAGGAATGTTGGCGTGTTAATTTCATT
CAAAGGTGAAGGAGGAGCGCCGATACGATCGCACCGTCCGCCGTTTCTAA
TTGAAGCGGTACTTTTTACTCCGTAGAGTCGACGCGAAAACATCCAAATT
TCAAGTTTCGGCCAATGAATTATTATGAGCT
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Coding sequence (CDS) from alignment at P-fluviatile_contig17:2728828..2735708+

>mRNA_P-fluviatile_contig17.3088.1 ID=mRNA_P-fluviatile_contig17.3088.1|Name=mRNA_P-fluviatile_contig17.3088.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1854bp|location=Sequence derived from alignment at P-fluviatile_contig17:2728828..2735708+ (Porterinema fluviatile SAG_2381)
ATGCGCCTGGTGGCAGCCCTCCTTGGATGCGGAGCCCTTGTAGCAGCAGT
GAGGGGTGAGGATGCTTGTCTGGCGGAGTCTTGCCCAGTGACAGCCAACG
CCTTCGCGGACGATGAGATGCGCCTGGTGGCAGCCCTCCTTGGATGCGGA
GCCCTTGTAGCAGCAGTGAGGGGTGAGGATGCTTGTCTGGCGGAGTCTTG
CCCAGTGACAGCCAACGCCTTCGCGGACGATGAGTTCATGGTGTGCAACG
TCGGGTCCTCGTGCCGGGATGAGTACAACGAAGCCAATGGCACGGAGCAC
GAGATTTGGCCGGCCGCGGCCCTCAGCCTGGCGAGAAGACGGTTGGAGGC
AGAGCGGAACCGGGTGATGCTCAACGAATACCAGCCAAGCATAGCGCCGA
AGTTCACCGAGTTCATGGTGTGCAACGTCGGGTCCTCGTGCCGGGATGAG
TACAACGAAGCCAATGGCACGGAGCACGAGATTTGGCCGGCCGCGGCCCT
CAGCCTGGCGAGAAGACGGTTGGAGGCAGAGCGGAACCGGGTGATGCTCA
ACGAATACCAGCCAAGCATAGCGCCGAAGTTCACCGAGGTCGGATACAAG
AAGGAGAAGCTCGATCCTGAGACCTACAAGGCCCTCCTGGTCTGGTACAC
TCGAGAGTTCGAGCACAGTGAACCAGAGGTCGAGGTGTGGCCGGAGGACA
ACACGTATGTCAACCACTGGAAGGTCGACACCGCCATGACGCGCTCTCCG
CGTTACATCCAAAATGTCGGATACAAGAAGGAGAAGCTCGATCCTGAGAC
CTACAAGGCCCTCCTGGTCTGGTACACTCGAGAGTTCGAGCACAGTGAAC
CAGAGGTCGAGGTGTGGCCGGAGGACAACACGTATGTCAACCACTGGAAG
GTCGACACCGCCATGACGCGCTCTCCGCGTTACATCCAAAATCTCCTTTT
TGACGAGCTGCTGCCCGAGATGGAGGAGTGGTCGGGCATCAAGCTGGAGT
CGACTTCGTGTTACGGCGTGCGGCACTACTATCGGGGCGCCATTCTAGCC
AACCATGTTGACCGCGTCGACACTCACGTGATATCCGGCATCATCAACGT
GGAGCAGCTCCTTTTTGACGAGCTGCTGCCCGAGATGGAGGAGTGGTCGG
GCATCAAGCTGGAGTCGACTTCGTGTTACGGCGTGCGGCACTACTATCGG
GGCGCCATTCTAGCCAACCATGTTGACCGCGTCGACACTCACGTGATATC
CGGCATCATCAACGTGGAGCAGGAAAACGTGGACACCCCTTGGCCCTTGT
ACGTTCGTGGACACGACGGTGTTGCGAGGAAGCTGTTTATTGAGGAAAAC
GTGGACACCCCTTGGCCCTTGTACGTTCGTGGACACGACGGTGTTGCGAG
GAAGCTGTTTATTGAGCCCGGAGAAATCATCTTCTACGAGAGCGCGAGCG
TTATCCATGGTCGCCCGGAGGCCTTCGAGGGGGACAGGTTCGCCAACATC
TTCGTGCACTTCACGCCTCAGACGGGATGGGACTTGACCGCTTTCGACGT
CCGCGCCGCCGCCTCAGAAGGCGACCGGAAGAAGCGTCGGGAGGCGAGGA
TGGTCAGGCCTCCGCAGGCTCCGGAGGTCGCATGACCCGGAGAAATCATC
TTCTACGAGAGCGCGAGCGTTATCCATGGTCGCCCGGAGGCCTTCGAGGG
GGACAGGTTCGCCAACATCTTCGTGCACTTCACGCCTCAGACGGGATGGG
ACTTGACCGCTTTCGACGTCCGCGCCGCCGCCTCAGAAGGCGACCGGAAG
AAGCGTCGGGAGGCGAGGATGGTCAGGCCTCCGCAGGCTCCGGAGGTCGC
ATGA
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