mRNA_P-fluviatile_contig17.3034.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig17.3034.1 vs. uniprot
Match: A0A6H5KYY0_9PHAE (Response regulatory domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY0_9PHAE) HSP 1 Score: 805 bits (2078), Expect = 9.910e-269 Identity = 552/1162 (47.50%), Postives = 672/1162 (57.83%), Query Frame = 1
Query: 406 MWRVLSSEANSSGRXXXXXXXXXXXXXXTPAWVWVDIGVAWAIAPAAGGSLQLSLWESIVPSWLCVTGALAYGLRAEEVAFKGEAAADGAVELFLALGGCALAALSIGYQVLWEQARDARTLMALEDSMALEDHSRRHSRFSELLLRHLVTDPSLQVLEAGVKELFKDTRIFVTHSDALEQIKDGVTLLTDYGERALQGLKNGAAELPAPVLESTDMEEVLDACLRTTAFLAVSRDDHKVQLDLRVAADVSKNVKTHRMWLSQMTRACLINALHPHNEESVILRVSYTKPGWMRVGVEARWRVTGAWPGDAR----GTKAEPARQREGPRTLCGWDRDMPEAAWWVRAAALSLGGEADYDSTKNRAGFHELWFTIPAENIPEDDLVSAGADSSSPAGKKMPAASPGPVYD---------------------------------EVGDAKTRGAGAHE----GEMLPRAGGENTVPLSSAGAAAAXXXXXXXXXXXXXXXXXAQSMAGVSPASVAGPERAGGVGLGAAALPRPGAWRAS------SPPLPGSS-SSHRGSRAANEKGYLLPAIRDPEISRRSGRTGGGGGISETTHVTDFETGDFTGSFLKDGSGSEAAAAAATVRKPNVH-YRSSPGXXXXXXXXXXXXXXXSKSGIRSSINDHVA-TEGTKVSRIETETHLYKWSTGHLFRPSS---DPGPGMEGWSVPTEEG--TAAAG-----------QQPVPGSP---AAGIAAARGRASLVAAVRGALATEDGLENLRASVHRDDAAKGAAAEATRVVRAAMGKSP-GGSGRLAGVARGEAVARAVGQGAVGLVAARLSGALARKRPSSAPFPFAASVPAPATATLSSKASGIAGLVQTLMESNSKSWLGSSTPFGGLTDVKK-ESREDDDDSDQSATKLEILLVDPQGLVRWVIPRLQERNFSVTVAHSAEAALDVLHGGGIQVAVVDLHMPSMIGIDFCRQVRARELETIAAFRSMSVAGVRG--AEGLEIAPTSTKLLLHSTAAGSVKYDELEAFLEEGLVAEYVPHPLDLSTLFDFLKLVEEEDDQHGVRRISALLNGPANEG--------ISLIVLGAAGAAASGPLLAIGRRTHLGEGGGERHGE-KDGPLAFVARFLGITRAPPSPC--VDDVASMFFS 3639
MWR +SSEA S+G TPAW WVD+G+AWAIAPAAGGSLQLSLW SIVPSWLCVT ALAYGLRAEEVA G+ A DGA+ LF +L C L+AL++GYQVLWEQARDARTLMALEDS+ EDH RR + FSELLLRHLVT+PSL VLEAGVKELFKD RIFV HSDALEQI+DGV+LL +YGE+AL GLKNGA+ELP PVLE DMEE+LDACLRTTA+LAVSRD HKVQLDLRVAA+V K+VK +R+WLSQMTRACLI+ALHP ++SVILRVSY +PG MRVG+EA WRV G+ G GT A+ RE PR L GWDRDMP A WWVRAAAL+LGGEADYD +++R GFHELWFTIPAEN+P+DD + + +PAG + A + + + RG G R G + T P ++ ++ + P S A + G G GAAALPRPGA S SP L S+ SS G AA ++G +LPAI+D +IS S+TT V +F++ D GS A T R H YRSS G S G R+S +V E ++SR+ + H R SS DP WS G TAAA + P SP AAG R SL +R L TE GL+ LR S+ D+A G AA A VRAAM K+ GG + + EAVARA GQG G+ AARL+ L KRPSSAP P AA ++ KAS GLVQTL+ESNS +WLG+ ++ K ++ + ++D+++S LE VAHSAE A+D++ G QVAVVDLHMP M G +FCR+VRA ELE AA RS+++ G G EGL STKLLLH+T+AGSVK+D+LEAFLEE LV EYVPHPLDL TL DFLKL EEEDDQ+G R++SALL G A++ +S +AG A SG + ++ + G G + G + GP+ FVAR G RAP ++DV S FFS
Sbjct: 1 MWRGMSSEAESAGTSGSGVEGGDAAG--TPAWAWVDVGIAWAIAPAAGGSLQLSLWGSIVPSWLCVTVALAYGLRAEEVALDGDGA-DGALILFASLVVCGLSALAVGYQVLWEQARDARTLMALEDSIDFEDHRRRQAAFSELLLRHLVTEPSLHVLEAGVKELFKDARIFVLHSDALEQIQDGVSLLAEYGEKALSGLKNGASELPTPVLEKADMEEILDACLRTTAYLAVSRDHHKVQLDLRVAANVDKSVKIYRLWLSQMTRACLIHALHPDEDDSVILRVSYARPGLMRVGIEAVWRVAGSRTGSGGSWGDGTSAD---HREAPRVLSGWDRDMPAAVWWVRAAALALGGEADYDRSRDREGFHELWFTIPAENVPDDDDL----ELETPAGARDTATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEIDKRGEXXXXXXXXGADEERGGLDMTAPRAARRESSRKPT--------------------LEPISSA--PKTGAAGAGAAALPRPGAMAVSPSFVNPSPRLSSSAPSSLHGLPAAKKRGTILPAIQDTQISLEG---------SQTTTVVEFDSDD-----RARGSRKSVGGAGGTDRTTIGHGYRSSLGGTIVGS---------SGRGERASARPNVTHLEDIRMSRVVADCDFNP--DEHANRRSSSAPDPTAAAAAWSGEANSGETTAAASVATTSTPVDRISRSTPNSPKGLAAGGERTSKRRSLSVTIRNLLGTEGGLDKLRESLQEDEANSGKAAAAAEAVRAAMRKTATGGDKGTVSMHKHEAVARAAGQGTAGMAAARLTSGLFLKRPSSAPSPAAA---------VTKKASVFGGLVQTLVESNSMNWLGTGKVASNNSEEKGGDAGDSEEDTEESGQALE-------------------------VAHSAEEAMDMILEGYYQVAVVDLHMPRMSGTEFCRRVRAHELEVAAAVRSVNINGRAGQEGEGLNEPQPSTKLLLHTTSAGSVKFDDLEAFLEEDLVDEYVPHPLDLGTLSDFLKLFEEEDDQYGTRKMSALLEGGADKSNGGDSTSTVSKYCGDSAGQAVSGLVRSLSGKNLAGADLGPQGGPVESGPVTFVARLFGAGRAPXXXXXSMEDVGSTFFS 1071
BLAST of mRNA_P-fluviatile_contig17.3034.1 vs. uniprot
Match: D7FY83_ECTSI (Response regulatory domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY83_ECTSI) HSP 1 Score: 716 bits (1847), Expect = 9.730e-239 Identity = 481/937 (51.33%), Postives = 578/937 (61.69%), Query Frame = 1
Query: 772 MALEDSMALEDHSRRHSRFSELLLRHLVTDPSLQVLEAGVKELFKDTRIFVTHSDALEQIKDGVTLLTDYGERALQGLKNGAAELPAPVLESTDMEEVLDACLRTTAFLAVSRDDHKVQLDLRVAADVSKNVKTHRMWLSQMTRACLINALHPHNEESVILRVSYTKPGWMRVGVEARWRVTGAWPGDARGTKAEP-ARQREGPRTLCGWDRDMPEAAWWVRAAALSLGGEADYDSTKNRAGFHELWFTIPAENIPEDD------LVSAGADSSSPAGKKMPAASPGPVYDEVGDA------KTRGAGAHEGEMLPRAG-----GENTVPLSSAGAAAAXXXXXXXXXXXXXXXXXAQSMAGVSPASVAGPERAGGVGLGAAALPRPGAWRAS------SPPLPGSS-SSHRGSRAANEKGYLLPAIRDPEISRRSGRTGGGGGISETTHVTDFETGDFTGSFLKDGSGSEAAAAAATVRKPNVH-YRSSPGXXXXXXXXXXXXXXXSKSGIRSSINDHVAT-EGTKVSRIETETHLYKWSTGHLFRPSSDPGP--GMEGWSVPTEEG--TAAAG----QQPV-------PGSP---AAGIAAARGRASLVAAVRGALATEDGLENLRASVHRDDAAKGAAAEATRVVRAAMGKSP--GGSGRLAGVARGEAVARAVGQGAVGLVAARLSGALARKRPSSAPFPFAASVPAPATATLSSKASGIAGLVQTLMESNSKSWLGSSTPFGGLTDVKK-ESREDDDDSDQSATKLEILLVDPQGLVRWVIPRLQERNFSVTVAHSAEAALDVLHGGGIQVAVVDLHMPSMIGIDFCRQVRARELETIAAFRSMSVAGVRGAEGLEIAPT--STKLLLHSTAAGSVKYDELEAFLEEGLVAEYVPHPLDLSTLFDFLKLVEEEDDQHGVRRISALLNGPANE 3432
MALEDSM EDH RR S FSELLLRHLVT+PSL VLEAGVKELFKD RIFV HSDALEQI+DGV+LL +YGE+AL GLKNGA+ELP PVLE DMEE+LDACLRTTA+LAVSRD HKVQLDLRVAADV K+VKT+R+WLSQMTRACLI+ALHP ++SVILRVSY +PG MRVG+EA WRV G+ G A QRE PR L GWDRDMP AAWWVRAAAL+LGGEADYD +++R GFHELWFTIPAEN+P+DD VSA ++ GP E+ DA TRG R G GE +V ++AGA +S + ++ + G G GAAALPRPGA AS SP L S+ SS G AA ++G +LPAI+D EIS S+TT+V +F++ D S K G A T R H YRSS G S G S +V E +VSR+ T+ + RPSS P P WS T G TAAA PV P SP AAG R SL VR L TE GL+ LR S+ D+A G AA A VR AM K+ G G ++ + + EAVARA GQGA G+ AARL+ L KRPSSAP P AA ++ KAS GLVQTL+ESNS +WLG+ +++ ++ ++ + ++D+++S LEILLVDPQGLVRW +PRL+ERNF VTVAHSAE A+D++ G QVAVVDLHMP M G +FCR+VRA ELE + RSM+ +G G EG E+ STKLLLH+T+AGSV +D+LEAFLEE LV EYVPHPLDL TLFDFLKL EEEDDQ+G R++SALL G A++
Sbjct: 1 MALEDSMDFEDHRRRQSAFSELLLRHLVTEPSLHVLEAGVKELFKDARIFVMHSDALEQIQDGVSLLAEYGEKALSGLKNGASELPTPVLEKADMEEILDACLRTTAYLAVSRDHHKVQLDLRVAADVDKSVKTYRLWLSQMTRACLIHALHPDEDDSVILRVSYARPGLMRVGIEAVWRVAGSREGGXXXXXXXTSADQREAPRVLSGWDRDMPAAAWWVRAAALALGGEADYDRSRDREGFHELWFTIPAENVPDDDDLELDTPVSARDTATXXXXXXXXTGGEGPPA-ELPDAGASSVLSTRGGSTSGRTRSSRLGEIDKQGEGSVSSTAAGA----DEERGGLDMTAPRAARRESSRNPTLEPLSSAHKTGATGAGAAALPRPGAMAASPTFVNPSPRLSSSAPSSLHGLPAAKKRGTILPAIQDTEISLEG---------SQTTNVMEFDSDDRARSSRKSVGG-----AGGTDRNTIGHGYRSSLGGTIVGS---------SGRGKSVSARPNVPRLEDIRVSRVATDCGFNPDEHANR-RPSSAPDPTAAAAAWSGETNIGETTAAASVATTSTPVDRISRSSPNSPKRFAAGGERTSKRRSLSITVRNLLGTEGGLDKLRESLQEDEANPGKAAAAAEEVRGAMRKTAAAGDKGNVS-MHKHEAVARAAGQGAAGMAAARLTSGLFLKRPSSAPSPAAA---------VTKKASVFGGLVQTLVESNSMNWLGTGKVASNISEEREGDTGDSEEDTEESEQTLEILLVDPQGLVRWALPRLKERNFFVTVAHSAEEAMDMILEGYYQVAVVDLHMPRMSGTEFCRRVRAHELEVATSIRSMNTSGRAGQEGEELNEPGPSTKLLLHTTSAGSVTFDDLEAFLEEDLVDEYVPHPLDLGTLFDFLKLFEEEDDQYGTRKMSALLEGGADK 898
BLAST of mRNA_P-fluviatile_contig17.3034.1 vs. uniprot
Match: A0A4U3AHV6_9BACI (Response regulator transcription factor (Fragment) n=1 Tax=Bacillus wiedmannii TaxID=1890302 RepID=A0A4U3AHV6_9BACI) HSP 1 Score: 60.1 bits (144), Expect = 9.770e-7 Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 2935 KLEILLVDP-QGLVRWVIPRLQERNFSVTVAHSAEAALDVLHGGGIQVAVVDLHMPSMIGIDFCRQVRAR 3141
K IL+VD Q +VR+V L + +F V AH+ E AL++++ IQ+A++D+ MP M GI+ CR++R +
Sbjct: 13 KNSILIVDDDQDIVRFVNANLMQEDFKVFSAHNGEEALEIINNNSIQLAILDIMMPQMDGIELCRRIREK 82
BLAST of mRNA_P-fluviatile_contig17.3034.1 vs. uniprot
Match: UPI001A32F581 (Response regulator transcription factor n=1 Tax=Bacillus sp. OA1 TaxID=2798534 RepID=UPI001A32F581) HSP 1 Score: 57.4 bits (137), Expect = 1.170e-5 Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 2935 KLEILLVDP-QGLVRWVIPRLQERNFSVTVAHSAEAALDVLHGGGIQVAVVDLHMPSMIGIDFCRQVRAR 3141
K IL+VD Q +V+++ L + F V AH+ E AL++++ IQ+A++D+ MP M GI+ CR++R +
Sbjct: 3 KNSILIVDDDQDIVQFIKVNLMQEGFKVFSAHNGEEALEIINNNSIQLAILDIMMPQMDGIELCRRIREK 72
BLAST of mRNA_P-fluviatile_contig17.3034.1 vs. uniprot
Match: A0RCN7_BACAH (Two-component response regulator n=394 Tax=Bacillaceae TaxID=186817 RepID=A0RCN7_BACAH) HSP 1 Score: 58.5 bits (140), Expect = 1.700e-5 Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 2935 KLEILLVDP-QGLVRWVIPRLQERNFSVTVAHSAEAALDVLHGGGIQVAVVDLHMPSMIGIDFCRQVRAR 3141
K IL+VD Q +VR+V L + F V AH+ E AL +++ IQ+A++D+ MP M GI+ CR++R +
Sbjct: 18 KNSILIVDDDQDIVRFVNANLMQEGFKVLSAHNGEEALKIINNNSIQLAILDIMMPHMDGIELCRRIREK 87
BLAST of mRNA_P-fluviatile_contig17.3034.1 vs. uniprot
Match: Q81F07_BACCR (Two-component response regulator vanR n=1 Tax=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) TaxID=226900 RepID=Q81F07_BACCR) HSP 1 Score: 58.5 bits (140), Expect = 1.700e-5 Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 2935 KLEILLVDP-QGLVRWVIPRLQERNFSVTVAHSAEAALDVLHGGGIQVAVVDLHMPSMIGIDFCRQVRAR 3141
K IL+VD Q +VR+V L + F V AH+ E +L++++ IQ+A++D+ MP M GI+ CR++R +
Sbjct: 22 KNSILIVDDDQDIVRFVKANLMQEGFKVFSAHNGEESLEIINNNSIQLAILDIMMPQMDGIELCRRIREK 91 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig17.3034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig17.3034.1 >prot_P-fluviatile_contig17.3034.1 ID=prot_P-fluviatile_contig17.3034.1|Name=mRNA_P-fluviatile_contig17.3034.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1213bp MPFSADGESQTESNGPGDRTADAALPGSRNQQRICRLRATLVEVIARGKQback to top mRNA from alignment at P-fluviatile_contig17:1820779..1839369- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig17.3034.1 ID=mRNA_P-fluviatile_contig17.3034.1|Name=mRNA_P-fluviatile_contig17.3034.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=18591bp|location=Sequence derived from alignment at P-fluviatile_contig17:1820779..1839369- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig17:1820779..1839369- >mRNA_P-fluviatile_contig17.3034.1 ID=mRNA_P-fluviatile_contig17.3034.1|Name=mRNA_P-fluviatile_contig17.3034.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7278bp|location=Sequence derived from alignment at P-fluviatile_contig17:1820779..1839369- (Porterinema fluviatile SAG_2381)back to top |