mRNA_P-fluviatile_contig1.224.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.224.1 vs. uniprot
Match: A0A6H5J9W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W9_9PHAE) HSP 1 Score: 302 bits (773), Expect = 1.710e-84 Identity = 262/570 (45.96%), Postives = 314/570 (55.09%), Query Frame = 2
Query: 572 KRVVSVGGGYSEIADTTCGTSVFAVGSTIYQLSGVD-LGDRQLEVWDMSGSD-CTISGIPSSANCYSGSMEMDLGGGISMTLTNCLCIYDQGLSTFYRSKVSATVMGARSISIPNDEIEVCLEPGFISQLVTAIVGDETYRYNFDLVIPGEPSSADLDVSSAPGSSAQDFSCGELQD---PTPAPVEPV-----PTTPEPXXXXXXXXXXXXXXXXPXXXXXVEPVAQTPGPV------------------------------------AATPRPVSPATEXXXXXXXXXXXXXXXXXX-----------------------------------------LTTPAP---VGGNLTSTLAPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSRQDVEGQECILPLPENDSCTYNTEVAS-TLSGIGSFYDPACKGTAGQG-----IPPGCESSSPRSCRSCLFNTPRWRAQNPGKEPPGFVDCPCCVLDVYNEETAANDDGPRCEVVTPAPTVTTPSPSSVNPITLTGN-LVFEDKTLTIGS----AGLVAFAGLVVLTFFPVFVN 1978
++VVSV G +SEIA+T+CGTSV AVGST+Y+LSG LG R LE +MS SD C+I+G+PS+A CY+G M L G +SM LT CLC Y G T YRS+V A V+GA ++S+P DEIE+CLE GFI QL TA V E Y YNFDLV+PG SS+DL VS+AP AQ F CGEL++ PTP+PV PT P P XXXXXXXXXXXXXXX XXXXX A P P XXXXXXXXXXXXXXXXXX + TPAP V G +S AP + G XXXXXXXX ++EGQEC++P E CT S T G+GSFYDP C A +P GC+ SS SCR CLFNTPRW+ +NPG++ P VDCPCCVLD+Y E+TA N+DG RCE +TPAP +T PS+V P+T+T L+FEDK L +G AG+VA L +LTFFPV V
Sbjct: 143 RQVVSVDGDHSEIAETSCGTSVMAVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTAMALDGDVSMALTICLCYYMDGSRTVYRSQVFAEVVGASAVSVPGDEIEICLEAGFIMQLTTATVEGEDYHYNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEEPTPSPVXXXXXXXEPTEPPPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVLPLPVETPAPSPAVRGLASS--APTSVGVDGGXXXXXXXXVAPTSVATSTGEGEG------NNMEGQECMIP--EGAPCTSTASTFSHTNQGVGSFYDPTCAAAAATASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVLDIYKEDTAINEDGVRCEWMTPAPVASTSEPSTVVPLTITRTELLFEDKPLNLGGGSLDAGVVALGLLALLTFFPVCVK 702
BLAST of mRNA_P-fluviatile_contig1.224.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE) HSP 1 Score: 253 bits (647), Expect = 5.470e-69 Identity = 226/546 (41.39%), Postives = 289/546 (52.93%), Query Frame = 2
Query: 404 RCPALLLLAVFVLLRGGGVEAQFTDGGEVALDCSRCECTGTSDDGDVAVFDNPSTGKRVVSVGGGYSEIADTTCGTSVFAVGSTIYQLSGV-DLGDRQLEVWDMS-GSDCTISGIPSSANCYSG-SMEMDLGGGISMTLTNCLCIYDQGLSTFYRSKVSATVMGARSISIPNDEIEVCLEPGFISQLVTAIVGDETYRYNFDLVIPGEPSSADLDVSSAPGSSAQDFSCGE-LQDPTPAPVEPVPTTPEPXXXXXXXXXXXXXXXXPXXXXXVEPVAQ------------TPGPVAATPRPVSPATEXXXXXXXXXXXXXXXXXXLTTPAP----VGGNLTSTLAPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSRQDVEGQECILPLPENDSCTYNTEVASTLSGIGSFYDPACKGTAGQGIPPGCESSSPRSCRSCLFNTPRWRAQNPGKEPPGFVDCPCCVLDVYNEETAANDDGPRCEVVTPAPTVTTPSPSSVNPITLTG--NLVFEDKTLTIGS---AGLVAFAGLVVLTFFP 1966
R +L LA ++L GGV +QFTDGG V L C C+CTG+SD VFDNPS+G+R+VSV G YSEI DT+CGTS AVGST+Y+LSG DL R LEV DM+ S C + P +A+CYS + + L + + LT + I+ + STFY+S + V G + + C E F+SQ+ V TY+YNF+ +PGEP+S+DL VS A SSA+ F CGE L TP+PV P XXXXXXXXXXXXXXXX XXXXX +A T P AA +P XXXXXXX TT AP VG +T T P G P + EG CILP E+ CT T ++T GIG +YDPAC+ G+ GC + + CR C FNTP + A++P ++ P + DCPCCVLD+Y E+ A N DG RC +PAP+ + V IT G +L F+D + + A L A L LTFFP
Sbjct: 44 RTEGMLALAAGLVL-AGGVSSQFTDGGAVDLSCGLCDCTGSSDGVSFVVFDNPSSGERIVSVDGDYSEILDTSCGTSAVAVGSTVYELSGAGDLDSRVLEVLDMTPSSTCVTADTPDTADCYSAPTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEYEFESF--CYENEFLSQVFLVTVLGTTYKYNFEFALPGEPTSSDLSVSGAASSSAEAFICGEDLPATTPSPVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAAAAXXXXXXXXXXTEAPQAAAAATAAPVXXXXXXXXXPANT--------TTAAPTLPAVGNVMTET--PVGGGGDDLAATPSPTVLVLVNNTQA--------PSFDYEDEGA-CILP--ESKPCTEATSFSNTNEGIGDYYDPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDIY-EQDAFNLDGQRCVSASPAPSSPALTEIPVGEITPRGFDDLSFDDGGWEMNAGEVAALSALGLLAALTFFP 564
BLAST of mRNA_P-fluviatile_contig1.224.1 vs. uniprot
Match: D8LE44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE44_ECTSI) HSP 1 Score: 213 bits (543), Expect = 7.440e-58 Identity = 182/400 (45.50%), Postives = 219/400 (54.75%), Query Frame = 2
Query: 641 AVGSTIYQLSGVD-LGDRQLEVWDMSGSD-CTISGIPSSANCYSGSMEMDLGGGISMTLTNCLCIYDQGLSTFYRSKVSATVMGARSISIPNDEIEVCLEPGFISQLVTAIVGDETYRYNFDLVIPGEPSSADLDVSSAPGSSAQDFSCGELQDPTPAPVEPVPTTPEPXXXXXXXXXXXXXXXXPXXXXXVEPVAQTPGPVAATPRPVSPATEXXXXXXXXXXXXXXXXXXLTTPAPVGGNLTSTLAPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSRQDVEGQECILPLPENDSCTYNTE-VASTLSGIGSFYDPACKGTAGQG-----IPPGCESSSPRSCRSCLFNTPRWRAQNPGKEPPGFVDCPCCVLDVYNEETAANDDGPRCEVV 1816
AVGST+Y+LSG LG R LE +MS SD C+I+G+PS+A CY+G M L G +SMTLT CLC Y G T +RS+V A V+GA ++S+P+DEIE+CLE GFI QL TA V DE Y YNFDLV+PG SS+DL VS+AP XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++EGQEC++P E CT +A T G+GS+YDP C A +P GC+ SS SCR CLFNTPRW+ +NPG++ P VDCPCCV+DVY E+TA ++DG R V
Sbjct: 2 AVGSTVYELSGDGALGSRSLEAVEMSSSDDCSITGVPSTAECYTGDTAMTLDGDVSMTLTICLCYYMDGSKTIFRSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEDEDYYYNFDLVVPGRDSSSDLSVSAAPX------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNMEGQECMIP--EEAPCTSTAATIAHTNQGVGSYYDPTCAAAAATASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVVDVYKEDTAISEDGVRSVAV 321
BLAST of mRNA_P-fluviatile_contig1.224.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.230e-48 Identity = 212/588 (36.05%), Postives = 281/588 (47.79%), Query Frame = 2
Query: 419 LLLAVFVLLRG--------GGV-----EAQFTDGGEVALDCSRCECTGTSDDGDVAVFDNPSTGKRVVSVGGGYSEIADTTCGTSVFAVGSTIYQLSGVDLGDRQLEVWDMSGSDCTISGI----PSSANCYSGSMEMDLGGGISMTLTNCLCIYDQGLSTF-YRSKVSATVMGARSISIPNDEIEVCLEPGFISQLVTAIVGDETYRYNFDLVIPGEPSSADLDVSSAPGSSAQDFSCG----------------------ELQDPTPAPVEPVPTTPEPXXXXXXXXXXXXXXXXPXXXXXVEPVAQTPGPVAATPRPVSPATEXXXXXXXXXXXXXXXXXXLTTPAPVGGNLTSTLAPAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------PLSRQDVEGQECILPLPENDSCTYNTEVASTLSGIGSFYDPACKGTAGQGIPPGCESSSPRSCRSCLFNTPRWRAQNPGK-EPPGFVDCPCCVLDVYNEETAANDDGPRCEVVTPAPTVTTPSPSSVNPITLTGNLVFEDKTLTIGSAGLVAFAGLVV---LTFFPV 1969
L +A F+LL G GG+ ++ DGG+V++ C C+C G+SD G + VF+NP+T V V G YSE+ +T+CG+S VGST+Y+LSGVD G R L V D+S DC G+ PS A+CYSG +D+ G LT C C +++G + Y + V A+V IS+P+ + +C + G SQLVT + D ++ Y FDL +PG S+ DL VSS P S AQ +C E PT A E TTP P XXXXXXXXXXXXXX X ++P + T G A + + E L TP + + AP XXXXXXXXXXXXXXXXXXXXXXXXXXXXX PL+ +++E C PL + CT T + G+G++YDP C G GC CR+C FN N + P + +CPCCV+D Y+ RC TP+P T + + FEDK L + A A L + LTF P+
Sbjct: 47 LFVAGFLLLGGRRGDEGDWGGLLLAVTGQEYIDGGDVSMACDECDCRGSSDSGTIVVFENPATESLVAKVEGEYSEVVETSCGSSAILVGSTVYELSGVDFGGRSLGVADLSADDCAGDGVIPTAPSDADCYSGESPIDVEGSTGAELTFCHCKWNEGENVAKYATNVRASVKDYVDISVPDSGLVMCQDQGVFSQLVTVLADDSSFYYLFDLDVPGYESAEDLVVSSGPSSDAQALACSVDEEGXXXXXXXXXXXXXXXXXETPSPTTAVEEEPQTTPAPVTXXXXXXXXXXXXXX----XSLQPDSSTAGQGATSSSTTAAPVEVDTPAPTPASRG------LGTPXXSSAAVDAPPAPTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVTPGPTVVLYSETLAPLTEEELEQVACTWPL--DGPCTTETLFSDINRGLGAYYDPGCSGA-------GCGVGDSGLCRTCYFNLTMGEEGNDDDVDMPDYPECPCCVMDEYDRSAD------RCVGATPSPAQGTGTEALET-------YSFEDKPLDMSGGEGFAVAALALFGLLTFLPL 602
BLAST of mRNA_P-fluviatile_contig1.224.1 vs. uniprot
Match: D8LE46_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE46_ECTSI) HSP 1 Score: 101 bits (251), Expect = 4.000e-21 Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 2
Query: 575 RVVSVGGGYSEIADTTCGTSVFAVGSTIYQLSGV-DLGDRQLEVWDMS-GSDCTISGIPSSANCYSGSME-MDLGGGISMTLTNCLCIYDQGLSTFYRSKVSATVMGARSISIPNDEIEVCLEPGFISQLVTAIVGDETYRYNFD 1000
++VSV G YSEI DT+CGTS AVGST+Y+LSGV DL R LE+ DM+ S C + P +A+CYS S + L + + LT + I+ + STFY+S + V G + + C E F+SQ+ V D TY+YNF+
Sbjct: 2 KIVSVDGDYSEILDTSCGTSAVAVGSTVYELSGVGDLDSRGLELLDMTPSSTCVTADTPDTADCYSASTTTVTLTDDVYVELTFNIGIWTEDGSTFYKSFTNTKVFGTTVVEYEFESF--CYENAFLSQVFFVTVLDTTYKYNFE 144 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.224.1 >prot_P-fluviatile_contig1.224.1 ID=prot_P-fluviatile_contig1.224.1|Name=mRNA_P-fluviatile_contig1.224.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=566bp MLAAAKGRKRGRERGTYWAKSEKERLHEQLHERLHERQLNRCPALLLLAVback to top mRNA from alignment at P-fluviatile_contig1:2799228..2813919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.224.1 ID=mRNA_P-fluviatile_contig1.224.1|Name=mRNA_P-fluviatile_contig1.224.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14692bp|location=Sequence derived from alignment at P-fluviatile_contig1:2799228..2813919+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2799228..2813919+ >mRNA_P-fluviatile_contig1.224.1 ID=mRNA_P-fluviatile_contig1.224.1|Name=mRNA_P-fluviatile_contig1.224.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3396bp|location=Sequence derived from alignment at P-fluviatile_contig1:2799228..2813919+ (Porterinema fluviatile SAG_2381)back to top |