prot_P-fluviatile_contig1.210.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.210.1
Unique Nameprot_P-fluviatile_contig1.210.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length185
Homology
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.720e-71
Identity = 131/193 (67.88%), Postives = 140/193 (72.54%), Query Frame = 0
Query:    1 MENLYTAQGVGIEQEGDEDEDEVDGN-------VVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVP-NEKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            MENLYT QGVG+E++GD+    VDGN       VVK+ESN RT+ VDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGA D GGLDVP NEKRFPGYDRDTK YD                       EDE K KEHFASYIENE+TF+DIE MYKETHKAIR DPSP  K  FT DKSFKN  KLT+ QRK
Sbjct:  130 MENLYTGQGVGVEEDGDDXXXXVDGNDGTDGLRVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAAD-GGLDVPHNEKRFPGYDRDTKQYDVS---------------------EDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRK 300          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS)

HSP 1 Score: 198 bits (503), Expect = 4.980e-60
Identity = 103/169 (60.95%), Postives = 131/169 (77.51%), Query Frame = 0
Query:   18 EDEDEVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            E  DE+DGNVVKT+    T+ VDEVDE+KRPF+ALLDVG ++T+TG R+FG +KGA D GGLD+P+ EKRFPGYDRD+K YDA++ HR+RI+G HV EY EYL EED TK +  FA Y+ENEV  D +E++Y+  H+ IR DPSP  K+ F+ DKSFK  AKLT ++RK
Sbjct:  120 EGNDEIDGNVVKTQVGKSTYYVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAAD-GGLDIPHSEKRFPGYDRDSKEYDADM-HRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERK 286          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA)

HSP 1 Score: 197 bits (502), Expect = 7.050e-60
Identity = 109/179 (60.89%), Postives = 136/179 (75.98%), Query Frame = 0
Query:    8 QGVGIEQEGDEDEDEVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            Q VG++ E  E   EVDG VV TE N +T+ VDEVDE++RPF+ALLDVG R+T+TG R+FG +KGA D GGLDVP+ EKRFPGYDRD K YDAE+ HR+RI+G HV EY EYL EED TK K+ FASYIE E+  D +E++Y+  H+A+R DPS   K  FT DKSFK  +KL++D+RK
Sbjct:  111 QKVGLD-EVYEGNTEVDGEVVSTEVNKKTYYVDEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAAD-GGLDVPHSEKRFPGYDRDGKEYDAEM-HRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERK 286          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.410e-59
Identity = 102/165 (61.82%), Postives = 131/165 (79.39%), Query Frame = 0
Query:   22 EVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            EVDG VV TE + +T+ V+EVD++KRPF+ALLDVG + T+TG+R+FG +KGA D GGLDVP+ EKRFPGYDRD K YD+++ HR+RI+G HV+EY EYL EED  K KEHFA YIE +V  D +E++Y+  H+AIR DPSP  K+ F+ DKSFK  AKLT+D+RK
Sbjct:  124 EVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAAD-GGLDVPHSEKRFPGYDRDAKEYDSDM-HRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERK 286          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: K0TJ10_THAOC (Ribosomal_L18_c domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ10_THAOC)

HSP 1 Score: 194 bits (494), Expect = 1.100e-58
Identity = 104/169 (61.54%), Postives = 128/169 (75.74%), Query Frame = 0
Query:   18 EDEDEVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            E  DE+DG VVKTE    T+ VDEVDE+KRPF+ALLDVG ++TSTG R+FG +KGA D GGLD+P+ EKRFPGYDRD+K YDA++ HR+RI+G HV EY EYL EED TK +E FA YI   +  D +E++Y+  H+ IR DPSP  K+ FT DKSFK  AKLT +QRK
Sbjct:  120 EGNDEIDGEVVKTEVGKTTYYVDEVDEDKRPFRALLDVGCKTTSTGCRIFGALKGAAD-GGLDIPHSEKRFPGYDRDSKEYDADM-HRERIFGGHVGEYMEYLEEEDNTKYQEQFAGYIAAGIDADGLEELYEGVHEKIREDPSPSEKKSFTPDKSFKRKAKLTLEQRK 286          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: A0A1E7FFB1_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFB1_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.170e-58
Identity = 103/165 (62.42%), Postives = 126/165 (76.36%), Query Frame = 0
Query:   22 EVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            EVDG VV TE   +T+ VDEVDE+KRPF+ALLDVG   T+TG+RVFG +KG  D GGLD+P+ EKRFPGYDRD K YDA+  HR+RI+G HV+EY EYL EED  K KEHFA +IE  V  D +E++Y+  H+ IRADPSP  K+ F+ DKSFK  AKLT+D+RK
Sbjct:  124 EVDGEVVSTEHGKKTYYVDEVDEDKRPFRALLDVGCNPTTTGHRVFGALKGGAD-GGLDIPHSEKRFPGYDRDAKEYDADT-HRERIFGGHVSEYMEYLEEEDNQKYKEHFAKFIEAGVEGDGLEELYESVHEKIRADPSPSEKKAFSPDKSFKRTAKLTYDERK 286          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: A0A7S2JWI3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWI3_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.370e-57
Identity = 100/165 (60.61%), Postives = 127/165 (76.97%), Query Frame = 0
Query:   22 EVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVP-NEKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            EVDG VVKTE + +T+ VDEVD++K+PF+ALLD+G++ T+TG RVFG +KGA D GGLD+P NEKRFPGYDRD K YDAE+ H++RI+G HV EY EYL EED  K +E F  YIEN+V  D +E++Y+E H+ IR DPS   K+ F  DKS+K  AKLT +QRK
Sbjct:   89 EVDGEVVKTEYDGKTYFVDEVDDDKKPFRALLDIGLKPTTTGCRVFGALKGAAD-GGLDIPHNEKRFPGYDRDAKEYDAEM-HKERIFGGHVGEYMEYLEEEDNQKYQEQFKIYIENDVEADGLEELYEEVHEKIREDPSAAEKKAFEPDKSYKRKAKLTLEQRK 251          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: A0A7S1YPP2_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S1YPP2_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.460e-56
Identity = 99/165 (60.00%), Postives = 128/165 (77.58%), Query Frame = 0
Query:   22 EVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            EVDG VVKTE + +T+ VDEVDE+KRPF+ALLDVG ++T+TG R+FG +KGA D GGLD+P+ EKRFPGYDRD K YDA++ H++RI+G HV EY EYL EED  K +E FA YI  ++  D +E++Y+  H+AIR DPSP  K+ F+ DKSFK  AKLT ++RK
Sbjct:  124 EVDGEVVKTEWDKKTYFVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAAD-GGLDIPHSEKRFPGYDRDGKDYDADM-HKERIFGGHVGEYMEYLEEEDNQKYQEQFAGYIAEDIEADGLEELYEGVHEAIREDPSPGEKKDFSPDKSFKRKAKLTLEERK 286          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: A0A7R9ZDP8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZDP8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.670e-56
Identity = 100/165 (60.61%), Postives = 127/165 (76.97%), Query Frame = 0
Query:   22 EVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            +VDG VV TE + + + VDEVDE+KRPF+ LLDVG R+T+TG R+FG +KGA D GGLD+P+ EKRFPGYDRD K YDA++ HR+RI+G HV EY EYL EED  K +E FASYI N+V  D +E++Y+  H+AIR DPSP  K+ F+ DKSFK  AKLT ++RK
Sbjct:  145 DVDGEVVSTEVDGKQYFVDEVDEDKRPFRCLLDVGCRATTTGCRIFGALKGAAD-GGLDIPHSEKRFPGYDRDAKEYDADM-HRERIFGGHVGEYMEYLEEEDNQKYQECFASYIANDVEADGLEELYESVHEAIREDPSPSDKKDFSPDKSFKKKAKLTLEERK 307          
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Match: B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC)

HSP 1 Score: 187 bits (476), Expect = 5.670e-56
Identity = 98/165 (59.39%), Postives = 126/165 (76.36%), Query Frame = 0
Query:   22 EVDGNVVKTESNVRTFDVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPN-EKRFPGYDRDTKSYDAELLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKETHKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK 185
            EVD  +V TE + + + VDEVDE+KRPF+ LLDVG + T+TG+RVFG +KGA D GGLD+P+ EKRFPG+DRD+K YDA++ HR+RI+G HV EY EYL EED  K +EHFAS+I  EV  D +E++Y+  H+ IR DPSP  K+ F+ DKSFK  AKLT D+RK
Sbjct:  124 EVDATIVSTEYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAAD-GGLDIPHSEKRFPGFDRDSKEYDADM-HRERIFGGHVGEYMEYLEEEDNQKYQEHFASFIAAEVEADGLEELYESVHEKIREDPSPSPKKDFSPDKSFKRKAKLTLDERK 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCG3_9PHAE1.720e-7167.88Ribosomal_L18_c domain-containing protein n=2 Tax=... [more]
B5YLN7_THAPS4.980e-6060.95RL5, ribosomal protein 5, 60S large ribosomal subu... [more]
A0A7S2S5W4_9STRA7.050e-6060.89Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A448Z3Q5_9STRA1.410e-5961.82Ribosomal_L18_c domain-containing protein n=1 Tax=... [more]
K0TJ10_THAOC1.100e-5861.54Ribosomal_L18_c domain-containing protein n=1 Tax=... [more]
A0A1E7FFB1_9STRA1.170e-5862.42RL5, ribosomal protein 5 60S large ribosomal subun... [more]
A0A7S2JWI3_9STRA1.370e-5760.61Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1YPP2_9STRA1.460e-5660.00Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]
A0A7R9ZDP8_9STRA2.670e-5660.61Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B7FPQ0_PHATC5.670e-5659.39Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPRINTSPR00058RIBOSOMALL5coord: 52..71
score: 60.62
coord: 72..91
score: 50.94
coord: 115..135
score: 43.45
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPFAMPF17144Ribosomal_L5ecoord: 29..83
e-value: 7.9E-15
score: 55.2
IPR005485Ribosomal protein L5 eukaryotic/L18 archaealPANTHERPTHR23410RIBOSOMAL PROTEIN L5-RELATEDcoord: 22..185
NoneNo IPR availableGENE3D3.30.420.550coord: 14..185
e-value: 1.2E-49
score: 171.3
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 45..160
IPR025607Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminalPFAMPF14204Ribosomal_L18_ccoord: 102..185
e-value: 1.1E-24
score: 87.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:2677738..2678292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.210.1mRNA_P-fluviatile_contig1.210.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 2677738..2678292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.210.1 ID=prot_P-fluviatile_contig1.210.1|Name=mRNA_P-fluviatile_contig1.210.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=185bp
MENLYTAQGVGIEQEGDEDEDEVDGNVVKTESNVRTFDVDEVDEEKRPFK
ALLDVGIRSTSTGNRVFGCMKGATDDGGLDVPNEKRFPGYDRDTKSYDAE
LLHRDRIYGAHVAEYTEYLTEEDETKSKEHFASYIENEVTFDDIEKMYKE
THKAIRADPSPPAKQPFTSDKSFKNDAKLTFDQRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005485Rbsml_L5_euk/L18_arc
IPR025607Rbsml_L5e/L18P_C