mRNA_P-fluviatile_contig16.2829.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: D7FRT2_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT2_ECTSI) HSP 1 Score: 550 bits (1418), Expect = 6.340e-177 Identity = 326/718 (45.40%), Postives = 419/718 (58.36%), Query Frame = 2
Query: 1139 SMPPRGGAFFGFAIVVAAALVTWGIIALVDYAENNNNDGSVSGGA-SRAADSDLQAELNNASPGDTIFIPVGTHFLSLTTSVDGERDRPITITCA-GSSRGDCVLRGDSNARVLDIRHSYYIIRDFTIDGQVASDEYREQLIFVHGTQSPYRDNGVEVSLTGVTIRGMDLRNAGRECVRLRFFVTDSVVEDNLIGPCGIEDFVLNLSSSSNGEGIYIGTALSQVDRRNDPDERVDECSGIVVMNNLIDTQGSEGVDIKEGCYENVVYNNIIRGQMHPATGGLSIRGDYNVVYKNTIEESEGSCIRIGGNDYDGNDYGANNEVYENILDRCKFAAIVVNDSPQIICENRATPATDPNDDEL-------------YALVRGDAAADFDFSVSTGCPSSLTDISALIEDGNRDFSIQTDDYQVTQDDDDINRSPXXXXXXXXXXXDDE--ILGSDTYVYRGCYRTPPQASDLFESVSFPDNNLSVAKCIGVCVQGLYVFAAIQDGSTCLCGNGDGXXXXXYFAEFGTSLACTTGCTGTDEQLCGGVASFSLYEIYGDGGVPPVQDQGTGD-GNGTPSTPSPTSIPMAGRGDPAPADDDGVPA------------------------VPNGSYLGCYRDSDSDPVLEFQYEDEDSLTPASCIETCRDKSEDISGVMGGSQCWCGTPEDYAKYGSAPSSCTFPCSGDRSQHCGGRGSLDLWTV 3166
+MP RGGAFFGFAIVV ALVTWGIIALV+ AE+NN+ A SR DSDLQA L++ASPGDTI+IP GTH +SLTT VDG D PITI G+S DCVLRGD ARVL++ H++YII+ FTIDG S +Y+EQL+++ G++ P +GV+ S+TGV ++GM L+NAG+EC+R+R+F T+ VV+ N IGPCGI+DF + S SNGEG+YIGTAL+Q+D +N D+ VDEC+GIVVMNN IDTQGSEGVDIKE G+CIR+GG + DG YG +NEVYEN LD C +A+ VN+SPQ+IC+N A DP DDEL YA+VRGDAA +F +VS C T D+ DD+++ + XX +DE ++ SD+Y Y GCY Q S L D+N+SV KCI CV +A I++G+ C CG+ + GT C CTG+DE +CGG +F LYEI+GDGGV V T D G+ T S V G+++GCY D DSDP+L+F YEDED+LTPASCIE+CR++ E+++GV GGSQCWCGT +DY +YG+ +C F CSGD Q CGGR S ++WTV
Sbjct: 8 TMPARGGAFFGFAIVVLVALVTWGIIALVEVAEDNNSSSDSGDFADSRDVDSDLQALLDDASPGDTIYIPAGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDDRARVLEVLHNHYIIQGFTIDGDDGSGDYKEQLLYIEGSRDPSEVDGVDSSITGVNVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIQDFQQD-SDGSNGEGVYIGTALNQIDEKNG-DDVVDECTGIVVMNNEIDTQGSEGVDIKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGTCIRVGGFEEDGVQYGEDNEVYENTLDGCLNSAVKVNESPQLICDNTVILAADPTDDELRGGEGITDGNGQSYAVVRGDAAEEFTDTVSAACTGDKT-------------VFFLPDHYTAPDDEEVETTEDEXXTDDG---EDEAGVVASDSYEYIGCYNDDTQNSLLPVLALDDDDNMSVEKCIAACVSEGSQYAGIKEGNECRCGD------DVDYTLHGTGT-CNFSCTGSDETVCGGEYAFDLYEIHGDGGVDGVVSSDTDDQGDDTGGVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGGTHMGCYEDYDSDPILDFLYEDEDTLTPASCIESCREEGEELAGVQGGSQCWCGTTDDYTRYGTG--TCNFSCSGDSEQTCGGRESANVWTV 698
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE) HSP 1 Score: 408 bits (1049), Expect = 6.910e-126 Identity = 224/342 (65.50%), Postives = 256/342 (74.85%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACKTQEYAPPSPPQNKQF 1017
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R E + + + +E+ + K+ GF +YLH P+DAGTKLKVKFR +G LR RRRR R VD+ED +FKC G + EDRV +E ++Y+T LGK++ YREMFEA +E+T AVLGHR+WVEKAG DI RIDRLGKTF HLWQSR ERLAIG+RSCGNNAPSSRGRVVNGLTAKACKTQ PP PP F
Sbjct: 124 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGML-KEGIGFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTQRVRPPHPPHRTFF 461
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5KMG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG6_9PHAE) HSP 1 Score: 389 bits (1000), Expect = 8.240e-121 Identity = 215/328 (65.55%), Postives = 248/328 (75.61%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACKT 975
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R E + + + +E+ + K+ GF +YLH P+DAGTKLKVKFR +G LR RRRR R VD+ED +FKC G + EDRV +E ++Y+T LGK++ YREMFEA +E+T AV+GHR+WVEKAG DI RIDRLGKTF HLWQSR ERLAIG+RSCGNNAPSS G VVNGLTAKACKT
Sbjct: 38 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKQIKDKEGLEVYGML-KEGIGFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSGGCVVNGLTAKACKT 361
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5KUW5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW5_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 4.180e-119 Identity = 217/328 (66.16%), Postives = 250/328 (76.22%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACKT 975
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R E + + + +E+ + K+ GF +YLH P+DAGTKLKVKFR +G LR RRRR R VD+ED +FKC G + EDRV +E ++Y+T LGK++ YREMFEA +E+T AVLGHR+WVEKAG DI RIDRLGKTF HLWQSR ERLAIG+RSCGNNAPSSRGRVVNGL+AKACKT
Sbjct: 341 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGML-KEGIGFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLSAKACKT 664
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5L4L1_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L1_9PHAE) HSP 1 Score: 394 bits (1011), Expect = 7.640e-117 Identity = 218/328 (66.46%), Postives = 250/328 (76.22%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACKT 975
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R E + + + +E+ + K+ GF +YLH P+DAGTKLKVKFR +G LR RRRR R VDDED + KC G + EDRV + +E ++Y+TG GK++ YREMFEA +E+T AVLGHR+WVEKAG DI RIDRLGKTF HLWQSR ERLAIG+RSCGNNAPSSRGRVVNGLTAKACKT
Sbjct: 461 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGML-KEGIGFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRKVDDEDNELKCD-GFECEDRVHVVAECLWYKKEREVYVTGWGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 783
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5K739_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K739_9PHAE) HSP 1 Score: 382 bits (980), Expect = 9.920e-116 Identity = 211/324 (65.12%), Postives = 244/324 (75.31%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAK 963
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R E + + + +E+ + K+ GF +YLH P+DAGTKLKVKFR +G LR RRRR R VD+ED +FKC G + EDRV +E ++Y+T LGK++ YREMFEA +E+T AVLGHR+W E+AG I RIDRLGKTF HLWQSR ERLAIG+RSCGNNAPSSRGRVVNGLTAK
Sbjct: 196 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGML-KEGIGFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEATGDEERTVAVLGHRRWFEQAGRYIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK 515
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5K4W7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4W7_9PHAE) HSP 1 Score: 395 bits (1014), Expect = 3.960e-115 Identity = 219/349 (62.75%), Postives = 258/349 (73.93%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACKTQEYAPPSPPQNKQFNSHPCLS 1038
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ER+P+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R E + + + +E+ + K+ GF +YLH P+DAGTKLKVKFR +G LR RRRR R VD+ED +FKC G + EDRV +E ++Y+T LGK++ YREMFEA +E+T AVLGHR+WVEKAG DI RIDRLGKTF HLWQS ERLAIG+RSCGNNAPSSRGRVV+GLTAKACK + +PP + + S C+S
Sbjct: 642 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERMPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGML-KEGIGFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRTVDEEDDEFKCDCGFECEDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSSKERLAIGDRSCGNNAPSSRGRVVDGLTAKACKRKNIR--TPPPHDKLISRACVS 984
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5JI54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI54_9PHAE) HSP 1 Score: 372 bits (956), Expect = 3.170e-113 Identity = 213/332 (64.16%), Postives = 246/332 (74.10%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRID-----RLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACK 972
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R + + + + +E+ + K+ GF +YLH P+DAGTKLKVKFR +G LR RRRR R VDDED KFKC G++ ED V + +E ++Y T L KVE RY EMFEA ++EK AVL HR+W +KAGS IGRID RLGKTF HLWQSR ERLAIG+RSCG+NAPSSRGRVV+ LTAKACK
Sbjct: 123 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREQQNLRKESKDKEGLEVYGML-KEGIGFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRTVDDEDDKFKCDCGSECEDGVHVVAEYQLYEKEREVYTTELVKVEGRYWEMFEAW-NREKKVAVLVHRRWFDKAGSYIGRIDIVRIDRLGKTFLNHLWQSRKERLAIGDRSCGHNAPSSRGRVVSSLTAKACK 449
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5JPI9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI9_9PHAE) HSP 1 Score: 383 bits (983), Expect = 7.510e-113 Identity = 211/326 (64.72%), Postives = 238/326 (73.01%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLLRRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLRPPRRRRFRNVDDE-DKFKCGFGNKREDRVRSRIGGRFVVQEGQMYMTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACKT 975
VPPL YAGEVWEGN KV+KELE AQMKAAK ILGCS+RTS AAVRAELGIQSLRSGRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + C +Q F +YLH P+DAGTKLKVKFR +G LR RRRR R VD+E ++FKC G E RV +E ++Y+T LGK++ YREMFEA +E+T AV+GHR+WVEKAG DI RIDRLGKTF HLWQSR ERLAIG+RSCGNNAPSSRGRVVNGLT KACKT
Sbjct: 483 VPPLEYAGEVWEGNKKVVKELEAAQMKAAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVA-------------------CAEREEQNLRFKDYLHGPMDAGTKLKVKFR--TGDIGLRE-RRRRHRTVDEEYNEFKCDCGFVCEHRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTVKACKT 786
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Match: A0A6H5JDR4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR4_9PHAE) HSP 1 Score: 372 bits (956), Expect = 8.240e-113 Identity = 211/334 (63.17%), Postives = 244/334 (73.05%), Query Frame = 1
Query: 1 VPPLGYAGEVWEGN*KVLKELEGAQMKAAKIILGCSKRTSYAAVRAELGIQSLRSGRDARKLTWQYRTGGMGKERLPKIAWEA*WANKKGGRQLTEWVKVVDDVLKKFVTDEDDTLETEGPKGFKER*MLLL--RRENTI*PKQPRRRRVEMCTVC*KQE*GFTEYLHAPIDAGTKLKVKFRLGSGTFDLR-PPRRRRFRNVDDED-KFKCGFGNKREDRVRSRIGGRFVVQEGQMY-----MTGLGKVEERYREMFEACKSQEKTAAVLGHRKWVEKAGSDIGRIDRLGKTFSRHLWQSRNERLAIGNRSCGNNAPSSRGRVVNGLTAKACKT 975
VPPL YAGEVWEGN KV+KELE AQM+AAK ILGCSK TS AAVR+EL IQSLR GRDARKLTWQYR GMG+ERLP+I WEA WANKK GRQ TEWVKVV+DV K DED+TLETEG +GFKE+ + R E + + + +E+ + K+ GF +Y H P+DAGTKLKVKFR G D+R RRRR R VD+ED +FKC G + EDRV VV E +Y +T LGK++ YR+MFEA +E+T AVLGHR+WVEKAG DI RIDRLGK F HLWQSR ERLAIG+RSCGNNAPSSRGRV+NGLTAKA KT
Sbjct: 159 VPPLEYAGEVWEGNKKVVKELEAAQMQAAKTILGCSKCTSIAAVRSELRIQSLRPGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGML-KEGMGFKDYPHGPMDAGTKLKVKFRTG----DIRLRERRRRHRTVDEEDDEFKCDRGFECEDRVH-------VVAECPLYKKERKVTELGKIDRAYRKMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKIFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVINGLTAKAWKT 480 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2829.1 >prot_P-fluviatile_contig16.2829.1 ID=prot_P-fluviatile_contig16.2829.1|Name=mRNA_P-fluviatile_contig16.2829.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=677bp MPPRGGAFFGFAIVVAAALVTWGIIALVDYAENNNNDGSVSGGASRAADSback to top mRNA from alignment at P-fluviatile_contig16:2334243..2353377- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2829.1 ID=mRNA_P-fluviatile_contig16.2829.1|Name=mRNA_P-fluviatile_contig16.2829.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=19135bp|location=Sequence derived from alignment at P-fluviatile_contig16:2334243..2353377- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:2334243..2353377- >mRNA_P-fluviatile_contig16.2829.1 ID=mRNA_P-fluviatile_contig16.2829.1|Name=mRNA_P-fluviatile_contig16.2829.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4062bp|location=Sequence derived from alignment at P-fluviatile_contig16:2334243..2353377- (Porterinema fluviatile SAG_2381)back to top |