prot_P-fluviatile_contig16.2812.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig16.2812.1
Unique Nameprot_P-fluviatile_contig16.2812.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length728
Homology
BLAST of mRNA_P-fluviatile_contig16.2812.1 vs. uniprot
Match: D7FSE7_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE7_ECTSI)

HSP 1 Score: 374 bits (959), Expect = 4.230e-111
Identity = 361/804 (44.90%), Postives = 403/804 (50.12%), Query Frame = 0
Query:   10 RASNFVPKTTALPPPVCAHCKQTERIWSSVLICDGCEATFHLGCMAFTSQPFGEWFCPRCTSFLLDSDSDIDDDQPAGQQPLSAPAAAVSPSDPXXXXXXXASMDALAG---------------------------ASAGSDHPEGPTRGKGAPKCTGASADPPAPAAAAPSTTASAGSRDDSIDDVADAAKSTEPFSPASPLRTATGGGKDKADAVAAAPPLA-------------------------------------------------------RRQKRWPLKGDVRGCRCPDCVSILLQCGGARPPEASKVLVPSDARCMPAPKIPKEWEEAAVPLRKGGLGVKRRRILRSPRDPYALTEDRSRGRETVPAPRRPGRPLGSKNLRKNSPVTGQPVTRKPIGRPKGSKNRVVAASNALGPPPEKSAMKTELGAGXXXXXXXXVERVALPARRELEISADGGSXXXXXXXXXXXXSPAGGSEGGRTRVRSTRGHSR--FRGGSDDEWSVGGGWGSXXXXXXXXXXXXXXXXNFRVGGDKVRRGRRAAGELSDDSYSVSDDGNSSSGREGRRXXXXXXXXXXXXXXXXXXXXXXXXXXGGASGAIVKRRPGRPRKSDSSLGARSGSKVSGKRTRGGEGSGAKRAKVSIEAREQGEEDGGSSARGSGSRRKRASPRVSRKGVVTACEHTDSVLYSRGQCKPCYMVAFWKRKHAELGIKPRKHRSSEWAEKKRELSEAAASRPHSGAGSSEGLSSS-GSLNASAFPVDTAA--AAEAAGDDGAVAGPAVGDGVRTAQTAPVTG 726
            RAS+FVPKTTALPPP+C  CKQTER W SVL+CDGCEATFHLGC   +SQPFGEW+CPRCTSFLLDSDS+ DD               VS +D                                            +     PE P  G  AP   G S+DP    +                                                                                                               RRQKRW L+GDVRGCRCPDCVSILLQ GG+RPPEAS +LV  +AR +PAPKIP+  E   V  R+GGLG+KRRR  RSPRDPYAL EDR R RETVPAP+RPGRP GS    K  P TG+  T +P+GRPKGSKNRVVA+S A        A++   G+         ++RVALP+RRELE+  +   XXXXXXXXXXXX         R  +RSTRGH+R  FRGGSD+EWS GG      XXXXXXXXXXXXXX  R GGDKV      AG++SD+SYS+              XXXXXXXXXXXXXXXXXXXXXXXXXX                                                     E GE           + RKRASPR SRKGVVTACEHTD  LYSRGQCKPCYMVA+W RKHAELGIKPRKHRSSEW EKKREL EAA+       GSSEGL SS G  NASAFPV T A  AA  +G   A  G     G R A     TG
Sbjct:   94 RASSFVPKTTALPPPICGRCKQTERSWPSVLVCDGCEATFHLGCARMSSQPFGEWYCPRCTSFLLDSDSEADDAXXXXXXXXXXXXXXVSSTDQRPAEASSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVSEPAPEKP-EGVEAPPAPGPSSDPAVEGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQKRWSLRGDVRGCRCPDCVSILLQAGGSRPPEASSLLVSEEARSLPAPKIPEGTEHGVVIPRRGGLGIKRRRQRRSPRDPYALKEDRLRERETVPAPKRPGRPPGSN---KPKPATGRTGTGRPVGRPKGSKNRVVASSPA--------AIRYGFGSSGREGSDS-LQRVALPSRRELEVDTNXXXXXXXXXXXXXXXXXX------RAGLRSTRGHNRRRFRGGSDEEWSFGG------XXXXXXXXXXXXXXXXRFGGDKVXXXXXXAGDVSDESYSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGGE-----------TVRKRASPRTSRKGVVTACEHTDRPLYSRGQCKPCYMVAYWNRKHAELGIKPRKHRSSEWVEKKRELKEAASRSEGGSVGSSEGLPSSVGVNNASAFPVGTPADSAARPSGVAAAATGSISSGGGREATNRKATG 861          
BLAST of mRNA_P-fluviatile_contig16.2812.1 vs. uniprot
Match: A0A6H5L3S5_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3S5_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 3.940e-103
Identity = 350/779 (44.93%), Postives = 394/779 (50.58%), Query Frame = 0
Query:   16 PKTTALPPPVCAHCKQTERIWSSVLICDGCEATFHLGCMAFTSQPFGEWFCPRCTSFLLDSDSDIDDDQPAGQQP----------------------------LSAPAAAVSPSDPXXXXXXXASMDALAGASAGSDHPEGPTRGKGAPKCTGASADPPAPAAAAPSTTASAG----------------SRDDSIDDVADAAKSTEPFSPASPLRTATGGGKDKADAVAAAPPL-------------------------------------------------------ARRQKRWPLKGDVRGCRCPDCVSILLQCGGARPPEASKVLVPSDARCMPAPKIPKEWEEAAVPLRKGGLGVKRRRILRSPRDPYALTEDRSRGRETVPAPRRPGRPLGSKNLRKNSPVTGQPVTRKPIGRPKGSKNRVVAASNALGPPPEKSAMKTELGAGXXXXXXXXVERVALPARRELEISADGGSXXXXXXXXXXXXSPAGGSEGGRTRVRSTRGHSR--FRGGSDDEWSVGGGWGSXXXXXXXXXXXXXXXXNFRVGGDKVRRGRRAAGELSDDSYSVSDDGNSSSGREGRRXXXXXXXXXXXXXXXXXXXXXXXXXXGGASGAIVKRRPGRPRKSDSSLGARSGSKVSGKRTRGGEGSGAKRAKVSIEAREQGEEDGGSSARGSGSRRKRASPRVSRKGVVTACEHTDSVLYSRGQCKPCYMVAFWKRKHAELGIKPRKHRSSEWAEKKRELSEAAASRPHSGAGSSEGLSSSGSLN-ASAFPV 692
            PKTTALPPP+C  CKQTER W SVL+CDGCEATFHLGC   +SQP GEW+CPRCTSFLLDSDS+ DD                                    ++  A A + S+    XXXX    + A +    +     ++G  AP   G S D        P+   SAG                                             GGG+  A +VA AP                                                          RRQKRW L+GDVRGCRCPDCVSILLQ GG+RPPEAS +LV  +AR +PAPKIP+  E   V  R+GGLGVKRRR  RSPRDPYAL EDR R RETVPAP+RPGRP GS N  K  P TG+  T +P+GRPKGSKNRVVA+S A        A++   G+         ++RVALP+RRELE+  +   XXXXXXXXXXXX         R  +RSTRGH+R  FRGGSDDEWS GGGW SXXXXXXXXXXXXXXXX                                        XXXXXXXXXXXXXXXXXXXXXXXXXX                                                          +GG + R      KRASPR SRKGVVTACEHTD  LYSRGQCKPCYMVA+W RKHAELGIKPRKHRSSEW EKKREL EAA+       GSSEGL SSG +N ASAFPV
Sbjct:  331 PKTTALPPPICGRCKQTERSWPSVLVCDGCEATFHLGCAHMSSQPCGEWYCPRCTSFLLDSDSEADDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVALAAEATTASEKARTXXXXXXXXSRAVSEPAPEK----SQGVEAPPAPGPSFD--------PAVEGSAGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGE--AGSVADAPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTDAGGRRQKRWSLRGDVRGCRCPDCVSILLQTGGSRPPEASSLLVSEEARSLPAPKIPEGTEHGVVIPRRGGLGVKRRRQRRSPRDPYALKEDRLRERETVPAPKRPGRPPGSAN--KPKPATGRTGTGRPVGRPKGSKNRVVASSPA--------AIRYGFGSSGREGGDS-LQRVALPSRRELEVDTNXXXXXXXXXXXXXXXXXX------RAGLRSTRGHNRRRFRGGSDDEWSFGGGWASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXGEGGETVR------KRASPRTSRKGVVTACEHTDRPLYSRGQCKPCYMVAYWNRKHAELGIKPRKHRSSEWVEKKRELQEAASRSEGGSVGSSEGLPSSGGVNNASAFPV 1057          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSE7_ECTSI4.230e-11144.90PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L3S5_9PHAE3.940e-10344.93PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 25..70
e-value: 4.5E-9
score: 46.1
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 25..70
e-value: 4.0E-7
score: 29.8
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 23..72
score: 9.383
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..72
e-value: 6.5E-11
score: 44.1
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 26..69
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 17..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:2139595..2143236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2812.1mRNA_P-fluviatile_contig16.2812.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig16 2139593..2143236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig16.2812.1 ID=prot_P-fluviatile_contig16.2812.1|Name=mRNA_P-fluviatile_contig16.2812.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=728bp
TPATAAASTRASNFVPKTTALPPPVCAHCKQTERIWSSVLICDGCEATFH
LGCMAFTSQPFGEWFCPRCTSFLLDSDSDIDDDQPAGQQPLSAPAAAVSP
SDPEPAAGAGASMDALAGASAGSDHPEGPTRGKGAPKCTGASADPPAPAA
AAPSTTASAGSRDDSIDDVADAAKSTEPFSPASPLRTATGGGKDKADAVA
AAPPLARRQKRWPLKGDVRGCRCPDCVSILLQCGGARPPEASKVLVPSDA
RCMPAPKIPKEWEEAAVPLRKGGLGVKRRRILRSPRDPYALTEDRSRGRE
TVPAPRRPGRPLGSKNLRKNSPVTGQPVTRKPIGRPKGSKNRVVAASNAL
GPPPEKSAMKTELGAGGAGGGGGGVERVALPARRELEISADGGSGGGGAG
GAGGEGSPAGGSEGGRTRVRSTRGHSRFRGGSDDEWSVGGGWGSDSDGDG
GGGGGGSGSGNFRVGGDKVRRGRRAAGELSDDSYSVSDDGNSSSGREGRR
RRGRGRGRGGIGTGSGGGGGNGSASAGGASGAIVKRRPGRPRKSDSSLGA
RSGSKVSGKRTRGGEGSGAKRAKVSIEAREQGEEDGGSSARGSGSRRKRA
SPRVSRKGVVTACEHTDSVLYSRGQCKPCYMVAFWKRKHAELGIKPRKHR
SSEWAEKKRELSEAAASRPHSGAGSSEGLSSSGSLNASAFPVDTAAAAEA
AGDDGAVAGPAVGDGVRTAQTAPVTGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD