prot_P-fluviatile_contig16.2686.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig16.2686.1
Unique Nameprot_P-fluviatile_contig16.2686.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length149
Homology
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: D7FHF7_ECTSI (40S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF7_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 1.470e-85
Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0
Query:   21 EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDC+NPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIG EGEATKIVPCSCAVVTDYGEQTQAL VLLEHLKKGGD
Sbjct:   14 EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGD 141          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A835YYB7_9STRA (40S ribosomal protein S12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB7_9STRA)

HSP 1 Score: 221 bits (562), Expect = 8.780e-72
Identity = 110/148 (74.32%), Postives = 126/148 (85.14%), Query Frame = 0
Query:    1 MVAEDVEMSAEGGEQVAAAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            M +EDV   AE     A A   +V E+SV DALKEVLKKALIFDGLRRGLHEC KALDRG+ARLCCLAKDCENPEYT+LVRALC+EG VH+IMV+TRQ+LGQWAGLCKI  EGEATK+VPCSCAVVTD+G ++ AL VL+EHL+KGG+
Sbjct:    1 MSSEDV---AEAPAAAAPAPAADVAELSVPDALKEVLKKALIFDGLRRGLHECVKALDRGTARLCCLAKDCENPEYTRLVRALCEEGGVHIIMVNTRQQLGQWAGLCKIDAEGEATKVVPCSCAVVTDFGTESPALTVLMEHLRKGGE 145          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A7S2CVX4_9STRA (40S ribosomal protein S12 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVX4_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.520e-63
Identity = 93/124 (75.00%), Postives = 113/124 (91.13%), Query Frame = 0
Query:   21 EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLK 144
            EVEV+E+ VLDALKEVLKKAL+ DGL RGLHECAKALD+ +A+LCCLAKDC+NPEYT+LVRALC+EG V+L+MVDT ++LG+W GLCKI  EGEATK+V CSCAV+T++GE++QALNVLLE LK
Sbjct:   18 EVEVEEMGVLDALKEVLKKALVHDGLSRGLHECAKALDKHTAKLCCLAKDCDNPEYTKLVRALCEEGGVNLVMVDTGKQLGEWCGLCKIDEEGEATKVVRCSCAVITEFGEESQALNVLLEFLK 141          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A7S2CD91_9STRA (40S ribosomal protein S12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CD91_9STRA)

HSP 1 Score: 193 bits (491), Expect = 5.340e-61
Identity = 92/125 (73.60%), Postives = 109/125 (87.20%), Query Frame = 0
Query:   21 EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKK 145
            EVEV+E+ VLDALKEVLKKAL+ DGLRRGLHE  KALDR SA+LCCLAKDC+NPEY +LVRALC+EG V+L+MV+T + LG+W GLCKI   GEA K+V CSCAVVT++GE+TQALN+LLE LKK
Sbjct:   16 EVEVEEMGVLDALKEVLKKALVHDGLRRGLHEGVKALDRHSAKLCCLAKDCDNPEYNKLVRALCEEGGVNLVMVETGKTLGEWCGLCKIDENGEAVKVVRCSCAVVTEFGEETQALNILLEFLKK 140          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: K0T7T2_THAOC (40S ribosomal protein S12 n=2 Tax=Thalassiosira TaxID=35127 RepID=K0T7T2_THAOC)

HSP 1 Score: 180 bits (457), Expect = 7.730e-56
Identity = 92/141 (65.25%), Postives = 110/141 (78.01%), Query Frame = 0
Query:    8 MSAEGGEQVAAAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            MS E G  VA     EV E++VLDALKEVLKKALI DGLR+GLHECAKALDR SARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+  +GE  K V  SCAV+TD+GE+T+AL VLL++L+K  D
Sbjct:    1 MSDEEGAPVAEEVVEEVAEMNVLDALKEVLKKALIHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALTVLLDYLQKQSD 141          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A7S2LXQ0_9STRA (40S ribosomal protein S12 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXQ0_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.590e-54
Identity = 86/128 (67.19%), Postives = 106/128 (82.81%), Query Frame = 0
Query:   21 EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            E EV E++VLDALKEVLKKAL+ DGLR+GLHECAKALDR SARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+  +GE  K V  SCAV+TD+GE+T+AL+VLL++L+K  D
Sbjct:   52 EEEVAEMNVLDALKEVLKKALVHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALSVLLDYLQKQAD 179          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A7S1BMI5_9STRA (40S ribosomal protein S12 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMI5_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.260e-54
Identity = 86/124 (69.35%), Postives = 104/124 (83.87%), Query Frame = 0
Query:   22 VEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKK 145
            VE  E+SVLDALKEVLKKALI DGL++GLHECAKALD+ SARLCCLAKDCEN EY +L+RAL  EG+V+LIMVD+ +ELG W GL K+G + E  K V  SCAV+TD+GE+T ALN+LL++LKK
Sbjct:   11 VETTEMSVLDALKEVLKKALIHDGLKKGLHECAKALDKRSARLCCLAKDCENEEYKKLIRALAAEGDVNLIMVDSGKELGTWCGLAKLGADLEVKKSVRTSCAVITDFGEETHALNILLDYLKK 134          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A6T5YAX8_9STRA (40S ribosomal protein S12 n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T5YAX8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.310e-53
Identity = 83/131 (63.36%), Postives = 105/131 (80.15%), Query Frame = 0
Query:   18 AAAEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            A A VE  E+SVLDALKEVLKK+++ DGLR+GLHECAKALDR +ARLCCLAKDCEN EY +L+RALC EG VH++MV++ +ELG W GL K+  +G   K V  SCAV+TD+GE+T+AL +LL+ L+K  D
Sbjct:   11 APAVVEEVEMSVLDALKEVLKKSMVHDGLRKGLHECAKALDRRAARLCCLAKDCENEEYKKLIRALCAEGEVHVVMVESGKELGAWCGLAKLNDDGSVKKAVRTSCAVITDFGEETRALTILLDFLQKQAD 141          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A7S2KYS2_9STRA (40S ribosomal protein S12 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYS2_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.890e-53
Identity = 88/132 (66.67%), Postives = 108/132 (81.82%), Query Frame = 0
Query:   14 EQVAAAAEV-EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLK 144
            ++ AAA EV E  E+SVLDALKEVLK+AL+ DGL++GLHECAKALDR SARLCCLAKDCEN EY +L+RAL  EG V LIMVD+ +ELG W GL K+   GE  K V CSCAV+T++GE+++ALNVLL++LK
Sbjct:    4 DEAAAAPEVVEEAEMSVLDALKEVLKRALMHDGLKKGLHECAKALDRQSARLCCLAKDCENEEYKKLIRALSAEGKVSLIMVDSGKELGAWCGLAKLDENGEVKKAVRCSCAVITEFGEESRALNVLLDYLK 135          
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Match: A0A7S2HNH8_9STRA (40S ribosomal protein S12 n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2HNH8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.510e-53
Identity = 85/128 (66.41%), Postives = 104/128 (81.25%), Query Frame = 0
Query:   21 EVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            EVE  E+SVLDALKEVLKKALI +GL++GLHECAKALDR +ARLCCLAKDCEN EY +L+RALC EG V +IMVD+ ++LG W GL K+  EG   K V  SCAV+TD+GE+T+AL VLL++L+K  D
Sbjct:   14 EVEEVEMSVLDALKEVLKKALIHNGLKKGLHECAKALDRKTARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDDEGGVKKAVRTSCAVITDFGEETRALTVLLDYLQKQAD 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF7_ECTSI1.470e-8597.6640S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YYB7_9STRA8.780e-7274.3240S ribosomal protein S12 n=1 Tax=Tribonema minus ... [more]
A0A7S2CVX4_9STRA1.520e-6375.0040S ribosomal protein S12 n=1 Tax=Florenciella par... [more]
A0A7S2CD91_9STRA5.340e-6173.6040S ribosomal protein S12 n=1 Tax=Dictyocha specul... [more]
K0T7T2_THAOC7.730e-5665.2540S ribosomal protein S12 n=2 Tax=Thalassiosira Ta... [more]
A0A7S2LXQ0_9STRA1.590e-5467.1940S ribosomal protein S12 n=1 Tax=Skeletonema mari... [more]
A0A7S1BMI5_9STRA2.260e-5469.3540S ribosomal protein S12 n=1 Tax=Corethron hystri... [more]
A0A6T5YAX8_9STRA2.310e-5363.3640S ribosomal protein S12 n=3 Tax=Bacillariophyta ... [more]
A0A7S2KYS2_9STRA2.890e-5366.6740S ribosomal protein S12 n=1 Tax=Leptocylindrus d... [more]
A0A7S2HNH8_9STRA4.510e-5366.4140S ribosomal protein S12 n=2 Tax=Lithodesmiaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000530Ribosomal protein S12ePRINTSPR00972RIBSOMALS12Ecoord: 116..129
score: 57.79
coord: 36..49
score: 68.18
coord: 50..66
score: 52.94
coord: 91..112
score: 51.65
IPR000530Ribosomal protein S12ePANTHERPTHR1184340S RIBOSOMAL PROTEIN S12coord: 18..145
IPR000530Ribosomal protein S12ePROSITEPS01189RIBOSOMAL_S12Ecoord: 32..50
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 14..146
e-value: 1.0E-51
score: 175.6
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 29..144
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 31..125
e-value: 5.4E-23
score: 80.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:861342..864218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2686.1mRNA_P-fluviatile_contig16.2686.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig16 860493..864791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig16.2686.1 ID=prot_P-fluviatile_contig16.2686.1|Name=mRNA_P-fluviatile_contig16.2686.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=149bp
MVAEDVEMSAEGGEQVAAAAEVEVKEISVLDALKEVLKKALIFDGLRRGL
HECAKALDRGSARLCCLAKDCENPEYTQLVRALCDEGNVHLIMVDTRQEL
GQWAGLCKIGPEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000530Ribosomal_S12e
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45