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Homology
BLAST of mRNA_P-fluviatile_contig15.2497.1 vs. uniprot
Match: D7FLE5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE5_ECTSI) HSP 1 Score: 206 bits (523), Expect = 5.150e-57 Identity = 179/301 (59.47%), Postives = 202/301 (67.11%), Query Frame = 3
Query: 402 EAATTMESFKDYVEPVAKMALDVKEKLESYEYPPSIVDAYKRGASSLGAEDISPVYVGAGFVAATGVLLLACRSCKAAPQVKV-RGSKKSKAKAKPTANGSVHQSGGNGKGGETSARGAAVNGGSG-ARDLSIDQSKPPVGGAKAATGKPAKKGQAKAPQXXXXXXXXXXPAPEAPPVITEEPEPATKKVSKKAXXXXXXXXXXXXXXXXXXXXXXTPKGSVAANGXXXXXXXXXXXXXXXXXXAGESDPWGAQHVGGEWQTGPIAAQEGEWETVSHKKSKPRKEKAAMDDTNTIPGGLSV 1298
+AA MESFKDY+EPV K+ALDVK+KLE Y+YPP++VDAYK A+++G EDISPVYVG G VAA+G LLLACRSC+AAP+ K RGSK ARDL+ + KP GGA+AA K +KK KAPQX P EAPPVITEEPE XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXAGE+DPWGAQH GGEWQTGP+ +QEGEWETVSHK+SKPRKEKAA+DD N IPGGL +
Sbjct: 5 DAAAWMESFKDYLEPVTKIALDVKDKLEGYDYPPAVVDAYKTTATAIGVEDISPVYVGVGVVAASGFLLLACRSCQAAPKKKKGRGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDLAGKKPKPAAGGAQAAAPKASKKAPTKAPQXQGKGKGKKKPVAEAPPVITEEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEADPWGAQHAGGEWQTGPMGSQEGEWETVSHKRSKPRKEKAAVDDANAIPGGLGL 305
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-12_007850.1 |
| Exons | 3 |
| Model size | 2169 |
| Cds size | 885 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815661.1007657-UTR-P-fluviatile_contig15:1824716..1825132 | 1622815661.1007657-UTR-P-fluviatile_contig15:1824716..1825132 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig15 1824717..1825132 + |
| 1693562787.243584-UTR-P-fluviatile_contig15:1824716..1825132 | 1693562787.243584-UTR-P-fluviatile_contig15:1824716..1825132 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig15 1824717..1825132 + |
| 1622815661.154241-UTR-P-fluviatile_contig15:1829264..1830132 | 1622815661.154241-UTR-P-fluviatile_contig15:1829264..1830132 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig15 1829265..1830132 + |
| 1693562787.2858498-UTR-P-fluviatile_contig15:1829264..1830132 | 1693562787.2858498-UTR-P-fluviatile_contig15:1829264..1830132 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig15 1829265..1830132 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815661.113129-CDS-P-fluviatile_contig15:1825132..1825195 | 1622815661.113129-CDS-P-fluviatile_contig15:1825132..1825195 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig15 1825133..1825195 + |
| 1693562787.2533267-CDS-P-fluviatile_contig15:1825132..1825195 | 1693562787.2533267-CDS-P-fluviatile_contig15:1825132..1825195 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig15 1825133..1825195 + |
| 1622815661.1257982-CDS-P-fluviatile_contig15:1827756..1828212 | 1622815661.1257982-CDS-P-fluviatile_contig15:1827756..1828212 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig15 1827757..1828212 + |
| 1693562787.2696784-CDS-P-fluviatile_contig15:1827756..1828212 | 1693562787.2696784-CDS-P-fluviatile_contig15:1827756..1828212 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig15 1827757..1828212 + |
| 1622815661.1423283-CDS-P-fluviatile_contig15:1828898..1829264 | 1622815661.1423283-CDS-P-fluviatile_contig15:1828898..1829264 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig15 1828899..1829264 + |
| 1693562787.2776911-CDS-P-fluviatile_contig15:1828898..1829264 | 1693562787.2776911-CDS-P-fluviatile_contig15:1828898..1829264 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig15 1828899..1829264 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig15.2497.1 >prot_P-fluviatile_contig15.2497.1 ID=prot_P-fluviatile_contig15.2497.1|Name=mRNA_P-fluviatile_contig15.2497.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=295bp
MESFKDYVEPVAKMALDVKEKLESYEYPPSIVDAYKRGASSLGAEDISPV YVGAGFVAATGVLLLACRSCKAAPQVKVRGSKKSKAKAKPTANGSVHQSG GNGKGGETSARGAAVNGGSGARDLSIDQSKPPVGGAKAATGKPAKKGQAK APQPQGKVKGKGKPAPEAPPVITEEPEPATKKVSKKAARKAKAAAAIAAA AAPAAASKKTPKGSVAANGSGSSGAGSRQAQHNGGGGAGESDPWGAQHVG GEWQTGPIAAQEGEWETVSHKKSKPRKEKAAMDDTNTIPGGLSV* back to topmRNA from alignment at P-fluviatile_contig15:1824717..1830132+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig15.2497.1 ID=mRNA_P-fluviatile_contig15.2497.1|Name=mRNA_P-fluviatile_contig15.2497.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5416bp|location=Sequence derived from alignment at P-fluviatile_contig15:1824717..1830132+ (Porterinema fluviatile SAG_2381) GAGCGGGTCATCTTTCTGTGAAGCCGAGCAAGCAAACAGGTGTACCAAGA
GGTGATATTGGGTTGATAATGCGTTGTACAATAGAGGTTGGATTCACGTG
CGTATGAAGAAAAGGGCTTGTCAATACGGAAAGAAACGCATGATGGTGAT
CGTTTTTGCTCACTCGGACTCTCCCCCTCCCTCTCGTCCTCGTCGGGCAA
TTACCTACCGGCCACCTCGAAGTCATGCGCACCCTCCCCCGTGTCTCTTC
CCTTGGATATACTTTTCACCCCAGTCAATTGCGCCTGGCCTTCACACTGG
CGTAGCTCTCTGGCGCCGGAACCAACAGCAAACGCAGTGCACAGATACAC
CTTACACACACGCAGATACAGAGCTCCGTGCCGGAGGCGTGCGGCCGGTT
CGAAGCTGCCACGACGATGGAGAGCTTTAAGGATTATGTGGAACCTGTGG
CAAAGATGGCTCTCGACGTCAAAGAGAAGGTGGGTGAAAATAGACGTAAA
TCCTGTTCTGCCTTGTCCTTTTTTCTCCCCGAGTCTTTGCAGACCGCGGA
TGCTTTACATTACCCCGACAGAGTTGCTCTCTCTCCCCCAACACGTGTTT
CTCGTCTGGCTATCACCCCTTCCCACCATTGTACGCCGCTTATTTCACAC
ACACAAACATGCACACGAGTGAAGGGAATCGACGTTCCAAGAAATCGTAT
TTCCTACAGGAAAAGGTGATGGTGCCGCTCGCGGCTGTGCCGGTGCGGGG
CCAGTGGGGAGAAGGATAAACCAGGCACAAGTTGGCCATTGAGCGGAGCT
ACCTGGGCAATCAGCCAACGGACGCGCTTCCATCGAGTGCATACTTTGCT
TCCGCACTTTCTTCGCAAATCTCTACCGGAATCGACGACAGTGTAGCAAA
ACTGAATCGCTATCGATCAGAGACACAAAATCGCACTTGCGGGCAACTGC
TGTGGACGAGGATAGGTGTCACCGAGATTTGCACCGTGAAGAAATCATCA
TTATCACATGATCACGTGTGTCCAACCTGCTCTCTTGAGGTTGATTTCTA
GTTCAAGAGTGTTCGTTTGTTCACATCAATGTGTCTTCTGGGTTGATTTT
TCTTCGTCCTAATTGCCTCTGATTAATTTTTGTGCAAGAGAGTGGTCAGA
TGTACCGTGTACCAGGTATGTCTAAGGGGGATCCGCCATTAGGACTTGAC
CTGGCCTTATCATCAGCCAGGGCTCCACAGTACTAACGGTATAGTGCAAC
ACTCACCCACGTCCCTTTTAGCTTTGGAAAAATCATCCATGTATATAGGA
CAGCGAAAGGTTGACGGTCACATGAGGTTGAAATGTATGTGTGGTTCCAG
AGGAGGGTGGTGCAAGGACCTGGGTTGACGTGCGAGGTTACCCGTAGCGT
GCATATCACGGACTCTTTTTGACAGAGAAGCTGATGCCGTTTTTTCGTCG
GAAAGCCACAGGGTATTAAAACCTCTTTGGCTGGGGCTGGAACGGAAATC
TTTCCGAAAAAAAACACCTGCGCCGCCTCTCTCGGCGGAGCTTTCATCTC
TCATGGAACAAGAGCGTGCACGCGGTGGATGGGACCCGCGCGTTTAGCGT
ACCTTGCACAAGTTTAAGGACACCCCGCGGAGGTCGCCTGCTATTTTCTG
ATTCTCGCAGATTTCCTCTTGTACTTGGTGTTTCAAAGACATCTTTTCGG
TACGAATCTCCGTACCGGGGAATCAATCCGCGCGCTCTGTTGCATAATAT
GAGATGCTGAGACCGAGGCCCTTGACGCAAACCACAGATTAGCGTTTGAA
ACATCTCCTTCGTCGAGTGCTTCAAGCACACCGTGTTCGAAAAGCGGAGC
TTACGTGAATGGCTGCGCCCGCATGGCTCCGTCCTCATGTATTATCTCCA
GGGTGTGTGCGTGTGGCTCTACCCATCTGTCAATTAGTAGTCACCATGAA
GATTTGGCCGCAACAGCAGCATCTATGTTAATGCTAACTTTTGCAACTTG
ATGAAAAATTTCCCAGACGCTGCGAGATTCTACTCTGGTTACGTATATGC
CAACGGCGTTGACATCGGTGGCTGACATTATACGTAAGCGACTGAAGCGG
ATTGATGTACCGCAATGATATCTAGGGTCAGATTCGTATCGAAAGAGTTT
GGAAACCATATTTGCATCAGGAGCTCTGCCATAAGTCAGAGGAAACTTGC
GATCTCTTTGTTCAGGACCTGACGAATCCAAGTGTAAAACAGGTTTACAA
GCGACGAGGGGGAAGAGAAAATGGCCCGTGCTCCGAAAGCCAATGGCATT
TTTTCGACTGTGTTCATGAGAGACCACGCCGCACTCCACGCAATAAACCC
CATCCCGCATTATTTCTTCACGATGGCGGGATATTTGGCGTGGCGGTGAT
ACATGCTCCCGAATCTCAACTCATGCCAGACACATGGTGGACTTAGTGAT
ACGCGCAGGGGAGACAGGCGCGGGGGAGGGGGATAAGGGGAACAAGGACC
AAAACATCTCGCAGGTTATGGCGATTTCATGATGTAAACAGACAGCCGGG
CCGCGGATTGTTGCAGAGTCTGCCCCTCGGGTGACCGGAAACTCAGGTCC
AAGGGGCAGTGAGAAATGACTAGGTTCGAAACTTGATCACTTGCTTTGTA
AAGTTTGTGCACGTGTCTGTGTGATGAAAGGTTATCGTGTCAAAGAGTAA
TTTCTCGTAAACAGCAGCAGCATCAGCCTATCAGCGTCTGCGATTCATTA
TAGGTCTTTCAATTTGATATCACACACACTTCCTCTCGGGGTATTCATTC
GCGTGTTGTTTCACATATCAATGCCGTTCGCTTGCGCAAGTGATGTGCAT
CAAACAAGCTGAATTCGATTGTTCGCTCAAATCATATCGGGAAGCCGTAG
CAATTGCTGCGCTCATGTGAACATGTCGCAATTTTCTTTTTTGTGGTGCC
GGCTGTGCATCCCGCCATTGCACCAACGTTTGTTTTTCGCGGCCCCGATT
CCCATCGATTCCTTCCGCTTCAAATGTTAAACGCATGTAGCTGGAGAGCT
ACGAGTACCCGCCATCAATCGTCGATGCGTACAAGCGCGGGGCGTCTTCG
CTCGGGGCCGAGGACATTAGCCCGGTCTACGTCGGCGCTGGATTTGTTGC
TGCAACGGGTGTCCTCCTCTTAGCCTGCCGCAGCTGCAAAGCCGCTCCAC
AAGTGAAGGTTCGCGGATCGAAAAAGTCCAAGGCCAAAGCCAAACCAACG
GCAAACGGAAGCGTGCATCAGAGCGGTGGTAATGGAAAGGGTGGGGAAAC
TTCGGCACGAGGGGCTGCGGTGAACGGTGGATCGGGGGCCCGCGACCTCT
CTATCGATCAGTCAAAGCCTCCTGTAGGGGGCGCGAAGGCCGCTACTGGT
AAGCCTGCCAAAAAGGGGCAGGCTAAGGCACCCCAGCCCCAGGGAAAGGT
CAAAGGGAAGGGGAAGCCTGCACCAGAAGCTCCTCCTGTGATAACGGTGA
GTGCGATAGACATCGACGTGTTTTTGGTCTATTTTCAGCAGTCACGCTTG
CGGGCTTTCCCCAAGGGCTTCTGATTGTGTTGATCTCTTGAGGGGGAAGA
TTGGCTTCATGTTGAATTAGCGTCGGAATGCATAAGTTTTTCAATCACAA
GTGGCAGGATGGCTTCATTTTTTTGTCTGTTTCTTCCCTCCTACGCCGCC
TCACGGTACTCTTTCTTGGGGTAACACTTCGTTTCGTTGGGGACGTTGCC
ATTTTACGAAGATACGTTTGTTGACCCCAGCTAAGAAATTGCGTAGCAAG
CAAGTCCCGTGGCGCATCAAACGGTCAGCGAATCGCCGGCGTATTTGTGT
GCATGGCGTGCATGCTTTGCGTCGTACATTTTCTGCGAGGCTTTCAGGAA
CTACAGCCACCATTCGATTTTTCAAAAAATAAATCCACAAGAGAAGCCGG
CCCTGCTTTCCTCTTTCTTTTCAAGGCAGGTTCCACGATCGAAGTACCCA
CCACAAATTCAAACAGAGCCGGAGCACAATGTGCAGAGTTTTTCAAGGTG
CTGCCATACTATCCTCTCGCTCTACCTTCCTCCAACGCGGTGGTGAAATC
TCAGCACTGTGCACGCGAAATATCCACATACCGATCTCTCCGCCATCTAT
TTGTGTTCCTGGACCATTCGTCTGCCCTGCAGGAGGAGCCCGAACCGGCT
ACGAAAAAGGTCAGCAAAAAGGCAGCAAGGAAGGCCAAAGCGGCCGCCGC
CATCGCGGCGGCAGCAGCTCCGGCAGCGGCCTCGAAAAAGACGCCGAAGG
GTTCGGTGGCGGCAAACGGTTCCGGGTCTAGCGGGGCAGGATCCCGACAG
GCACAGCACAACGGGGGTGGGGGTGCTGGAGAATCCGACCCCTGGGGGGC
GCAACACGTCGGAGGCGAGTGGCAGACGGGCCCCATAGCCGCGCAAGAGG
GAGAGTGGGAAACGGTTTCCCACAAGAAGTCCAAGCCTCGGAAGGAGAAG
GCGGCGATGGACGACACGAACACCATCCCCGGCGGGCTCAGTGTCTAAAT
CGATGTCACTAGTATGGTTTTGCAGGCGGTCCTTAGGCTGCCAGACTGAC
CGCAGCAATTGCATGCGGCGTCTGATTTGCGACTTTTGTGGTGGTTCGCT
GCTTTTTTTTCCAGCCCAACCGGTTGCTGTGTGAGATGATTCTTCCCAAT
TCCCTCGTCCGGCCGGACCGTCGGCTAGGTAAATTTGATACATGCAACGC
AAACAGGGGTTAACTTCGAGCTGAACGCCGACAGAGGCAGCCTCGATAGG
GTGTTCAGGTTTGAGTCAGGTATACACGCTCGCGCGTTTGGCGAGCACGA
TACATCGTCGCTGCGCAAAAATTGTGGCCACAAAACTGGTGCGGTGTTCT
GTTGCGTGGGAGTTAGCTAATTGTGGCAATGGCCGCGGGGGGATACATTT
AGGAGAAGATTGGGGGGCCACGTGCGTTCGAACGTGGTGGTCGAGGGTCG
GCTTTCGACACGGTTCATGGTCGTTGACCTGTATGTCAAAACCATACAAG
TTGAATTGTGCAAAAGCTGTTGAGGGCAGGTGTCATGAAGAGAATCAAAG
CGAGCGAACTTTACGTGATTCTTATTATTTGGCCTGTGTGACTACAAACA
CGGTCCAGAGCTGCCCGGAGCTGATTGACCCTCTCGCCGATTCCGCCGGT
GGAATTTCGTAATATCTGTTGCTCGACGCACTCGCGTTCTTGGCATCATC
GCCATTTTGTTTTGAGTTCTCGACGTCCAACGCGAACTACGCGAGGGCCA
TGAAAGGACCCTGGGTTTATTGGAACATGCTGTTATGCTAACCTTGGAAA
CACACCACGGCAGAAACGGTAGAAATATGACTGATGCATCCCACGTCATT
GTGGTGCTCACCGTCG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig15:1824717..1830132+ >mRNA_P-fluviatile_contig15.2497.1 ID=mRNA_P-fluviatile_contig15.2497.1|Name=mRNA_P-fluviatile_contig15.2497.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1770bp|location=Sequence derived from alignment at P-fluviatile_contig15:1824717..1830132+ (Porterinema fluviatile SAG_2381) ATGGAGAGCTTTAAGGATTATGTGGAACCTGTGGCAAAGATGGCTCTCGA CGTCAAAGAGAAGATGGAGAGCTTTAAGGATTATGTGGAACCTGTGGCAA AGATGGCTCTCGACGTCAAAGAGAAGCTGGAGAGCTACGAGTACCCGCCA TCAATCGTCGATGCGTACAAGCGCGGGGCGTCTTCGCTCGGGGCCGAGGA CATTAGCCCGGTCTACGTCGGCGCTGGATTTGTTGCTGCAACGGGTGTCC TCCTCTTAGCCTGCCGCAGCTGCAAAGCCGCTCCACAAGTGAAGGTTCGC GGATCGAAAAAGTCCAAGGCCAAAGCCAAACCAACGGCAAACGGAAGCGT GCATCAGAGCGGTGGTAATGGAAAGGGTGGGGAAACTTCGGCACGAGGGG CTGCGGTGAACGGTGGATCGGGGGCCCGCGACCTCTCTATCGATCAGTCA AAGCCTCCTGTAGGGGGCGCGAAGGCCGCTACTGGTAAGCCTGCCAAAAA GGGGCAGGCTAAGGCACCCCAGCCCCAGGGAAAGGTCAAAGGGAAGGGGA AGCCTGCACCAGAAGCTCCTCCTGTGATAACGCTGGAGAGCTACGAGTAC CCGCCATCAATCGTCGATGCGTACAAGCGCGGGGCGTCTTCGCTCGGGGC CGAGGACATTAGCCCGGTCTACGTCGGCGCTGGATTTGTTGCTGCAACGG GTGTCCTCCTCTTAGCCTGCCGCAGCTGCAAAGCCGCTCCACAAGTGAAG GTTCGCGGATCGAAAAAGTCCAAGGCCAAAGCCAAACCAACGGCAAACGG AAGCGTGCATCAGAGCGGTGGTAATGGAAAGGGTGGGGAAACTTCGGCAC GAGGGGCTGCGGTGAACGGTGGATCGGGGGCCCGCGACCTCTCTATCGAT CAGTCAAAGCCTCCTGTAGGGGGCGCGAAGGCCGCTACTGGTAAGCCTGC CAAAAAGGGGCAGGCTAAGGCACCCCAGCCCCAGGGAAAGGTCAAAGGGA AGGGGAAGCCTGCACCAGAAGCTCCTCCTGTGATAACGGAGGAGCCCGAA CCGGCTACGAAAAAGGTCAGCAAAAAGGCAGCAAGGAAGGCCAAAGCGGC CGCCGCCATCGCGGCGGCAGCAGCTCCGGCAGCGGCCTCGAAAAAGACGC CGAAGGGTTCGGTGGCGGCAAACGGTTCCGGGTCTAGCGGGGCAGGATCC CGACAGGCACAGCACAACGGGGGTGGGGGTGCTGGAGAATCCGACCCCTG GGGGGCGCAACACGTCGGAGGCGAGTGGCAGACGGGCCCCATAGCCGCGC AAGAGGGAGAGTGGGAAACGGTTTCCCACAAGAAGTCCAAGCCTCGGAAG GAGAAGGCGGCGATGGACGACACGAACACCATCCCCGGCGGGCTCAGTGT CTAAGAGGAGCCCGAACCGGCTACGAAAAAGGTCAGCAAAAAGGCAGCAA GGAAGGCCAAAGCGGCCGCCGCCATCGCGGCGGCAGCAGCTCCGGCAGCG GCCTCGAAAAAGACGCCGAAGGGTTCGGTGGCGGCAAACGGTTCCGGGTC TAGCGGGGCAGGATCCCGACAGGCACAGCACAACGGGGGTGGGGGTGCTG GAGAATCCGACCCCTGGGGGGCGCAACACGTCGGAGGCGAGTGGCAGACG GGCCCCATAGCCGCGCAAGAGGGAGAGTGGGAAACGGTTTCCCACAAGAA GTCCAAGCCTCGGAAGGAGAAGGCGGCGATGGACGACACGAACACCATCC CCGGCGGGCTCAGTGTCTAA back to top
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