mRNA_P-fluviatile_contig15.2473.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig15.2473.1
Unique NamemRNA_P-fluviatile_contig15.2473.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: D7FLC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC2_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 1.190e-88
Identity = 132/158 (83.54%), Postives = 145/158 (91.77%), Query Frame = 1
Query:  178 VFNVGQKAKRTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDNIVVRWRLSGRINLPFNPPIKPYVVTTTFETDSEGLLSTQRDEFSIAGWDILLHAVFPGHPFGAEPAPPV*P 651
            VFNVG+ AKR GM   +MA+A+D  LR NGWFVTGR+D+SLFS+ F FSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEV+G++IVV WRLSGRINLPFNPPIKPY+VTTTFE DS+GLLSTQRDEFSIAGWDILLHAVFPGHPFGA+PAPPV P
Sbjct:   91 VFNVGEDAKRRGMAAGEMASALDEALRSNGWFVTGRIDSSLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPP 248          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: A0A6H5JBW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW5_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 5.450e-84
Identity = 125/146 (85.62%), Postives = 135/146 (92.47%), Query Frame = 1
Query:  214 MKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDNIVVRWRLSGRINLPFNPPIKPYVVTTTFETDSEGLLSTQRDEFSIAGWDILLHAVFPGHPFGAEPAPPV*P 651
            M   +MA+A+D  LR NGWFVTGRVDASLFS+ F FSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEV+G++IVV WRLSGRINLPFNPPIKPY+VTTTFE DS+GLLSTQRDEFSIAGWDILLHAVFPGHPFGA+PAPPV P
Sbjct:    1 MAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSDGLLSTQRDEFSIAGWDILLHAVFPGHPFGADPAPPVPP 146          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: A0A383W0Z3_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W0Z3_TETOB)

HSP 1 Score: 161 bits (407), Expect = 1.140e-42
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 1
Query:  202 KRTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDN--IVVRWRLSGRINLPFNPPIKPYVVTTTFETDSE-GLLSTQRDEFSIAGWDILLHAVFPGHPFGAEPAPPV 645
            K +G    QMA  V+AGL R+ WFVTG VD  LFSD+F+F D  V+ TG+  YA GV KLF+Q  S+ ++IS E   D   +VV WRL GR+NLPF P IKPYVVTTT   D + GL+ +Q DEFS+ GWD+LL ++  G  FGA+PAPPV
Sbjct:   72 KLSGRSIQQMAELVEAGLSRSQWFVTGEVDPRLFSDSFAFKDESVATTGIKAYATGVRKLFDQATSKVELISVEARPDTQALVVVWRLEGRVNLPFKPKIKPYVVTTTLGLDPDSGLICSQLDEFSVPGWDLLL-SILLGEGFGAKPAPPV 221          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: A0A250WW06_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WW06_9CHLO)

HSP 1 Score: 151 bits (382), Expect = 1.290e-39
Identity = 78/150 (52.00%), Postives = 100/150 (66.67%), Query Frame = 1
Query:  202 KRTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDN--IVVRWRLSGRINLPFNPPIKPYVVTTTFETDSEGLLSTQRDEFSIAGWDILLHAVFPGHPFGAEPAPPV 645
            K TG++  Q+A  ++A L  + WFVTG VD SLF+  FSF D  V+  G+  YAEGV K+F+QE SR +V+S + +     IVV WRL G +NLPF P I PYVVTTTFE DS+GL+S+Q DEFS+ GW +L  A+  G   G  PA PV
Sbjct:   46 KATGLEIRQLADRIEAKLSMSEWFVTGMVDPSLFAKEFSFKDDSVATKGIRSYAEGVRKIFDQETSRAEVVSVDTDAAKGIIVVTWRLEGCVNLPFKPRITPYVVTTTFEVDSDGLISSQLDEFSVPGWRLLAGALL-GSWAGPTPALPV 194          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: A0A7J7PWC3_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PWC3_9CHLO)

HSP 1 Score: 153 bits (386), Expect = 1.940e-39
Identity = 78/151 (51.66%), Postives = 103/151 (68.21%), Query Frame = 1
Query:  202 KRTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDN--IVVRWRLSGRINLPFNPPIKPYVVTTTFETD-SEGLLSTQRDEFSIAGWDILLHAVFPGHPFGAEPAPPV 645
            K +G    +MA  V+AGL ++ WFVTG VD  LFSD+F+F D  V+ TG+  YA GV KLF+Q  S+ ++++ E +  +  IVV WRL GR+NLPF P IK YVVTTT   D   GL+++Q DEFS+ GWD+LL  +  G  FGA+PAPPV
Sbjct:   93 KLSGRSIQEMAQLVEAGLSKSQWFVTGEVDPRLFSDSFAFKDESVATTGIKAYATGVRKLFDQATSKVELVTVEPQPADQAIVVTWRLEGRVNLPFKPKIKAYVVTTTLGVDPGTGLINSQVDEFSVPGWDLLLSTLL-GEGFGAKPAPPV 242          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: R1EZP5_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EZP5_EMIHU)

HSP 1 Score: 147 bits (370), Expect = 1.470e-35
Identity = 80/154 (51.95%), Postives = 94/154 (61.04%), Query Frame = 1
Query:  193 QKAKRTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDN-IVVRWRLSGRINL-PFNPPIKPYVVTTTFETDSEGLLSTQRDEFSIAGWDILLHAVFPG-HPFGAEPAPPV 645
            +  K  G+   QMA  +D GLR  GWFVTGR    LFSD+F FSDP V L G + Y   V +LFNQE S  +V+     G   I V WRLSG +NL  F   IKPYVVTTT ETD++GL+S Q D FSI G+DILL A+ P   P     APPV
Sbjct:   65 ESPKARGLSTEQMAGRIDTGLRERGWFVTGRGMPELFSDSFRFSDPDVQLDGYEPYCRQVRRLFNQETSAMEVVCAAATGPRAITVVWRLSGGVNLGAFGVAIKPYVVTTTLETDADGLVSAQEDHFSIPGYDILLSALLPPLRPLLQPEAPPV 218          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: A0A7S3ZJJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJJ4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.690e-31
Identity = 67/135 (49.63%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  205 RTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDNIVVRWRLSGRINLPFNPPIKPYVVTTTFETDSEGLLSTQRDEFSIAGWDILLHAVFP 609
            +T +   ++  A+D GLR   WFVTG+V    FSD F F DP VSLTG+  YAEGVA+LF  E++RC+VI+    G+ I V WRLSG + +     IKPYVV TTF    +GL+  Q D FSI GW ILL  + P
Sbjct:  103 KTPLPLGELVGALDRGLREREWFVTGKVLPEYFSDDFKFEDPDVSLTGIQNYAEGVARLFG-EDARCEVIACAPRGEEIAVDWRLSGSVRVGPGATIKPYVVHTTFRV-RDGLVVFQEDAFSIPGWQILLGVLLP 235          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: A0A6T8H729_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8H729_HEMAN)

HSP 1 Score: 130 bits (327), Expect = 2.960e-31
Identity = 67/152 (44.08%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  196 KAKRTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDNIV-VRWRLSGRINLPFNPPIKPYVVTTTFETDSEGLLSTQRDEFSIAGWDILLHAVFPG-HPFGAEPAPPV 645
            K K +G+   QMAA VD GLR   WFVTG     LF   F F DP V   G+++YA GV +LFNQE S   V+   V  + I+ V+WRL G +N+     IKPYVV T  E   +GL+  Q D FSI  W++L+ A  P   P    P PP+
Sbjct:   92 KPKSSGLSVDQMAARVDQGLRERAWFVTGEALPELFHPDFEFKDPNVKTKGIEEYARGVHRLFNQEASSMQVVECAVSSEKIIGVKWRLEGAVNVGPGLEIKPYVVYTDLEVGQDGLIIAQEDRFSIPAWELLIWAFLPFLRPMLPPPCPPI 243          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: A0A7R9ZLF1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLF1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.200e-31
Identity = 71/146 (48.63%), Postives = 91/146 (62.33%), Query Frame = 1
Query:  223 AQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEGDN-IVVRWRLSGRINLPFNP-PIKPYVVTTTFETDSE-GLLSTQRDEFSIAGWDILLHAVFPG--HPFGAEPAPPV 645
            A +A A+D  L +  WFVTG V+ + F+D F F DP V L G++ YA GV KLFNQ+ +R ++I T V  D  I   WRLSG IN+ FN  PIKPY+  T F  D+E  L++ Q D F I  WDILL ++FP       +EPAPPV
Sbjct:  127 ATLAQALDYELTQREWFVTGDVNPAYFADTFEFQDPDVQLKGIEAYARGVRKLFNQKTARAEIIETVVNADGGITCTWRLSGDINIGFNGLPIKPYICYTDFTVDTETSLITQQEDRFDIPQWDILLSSLFPFLIGTVTSEPAPPV 272          
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Match: B7G0N2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0N2_PHATC)

HSP 1 Score: 129 bits (324), Expect = 1.320e-30
Identity = 72/164 (43.90%), Postives = 99/164 (60.37%), Query Frame = 1
Query:  181 FNVGQKAKRTGMKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVEG---DNIVVRWRLSGRINLPFNPPIKPYVVTTTFETD-SEGLLSTQRDEFSIAGWDILLHAVFP---GHPFGAEPAPPV*P 651
            FN  + + +  +K   +A A+DA L    WFVTG V+   F+D+F F DP V L G++ YA GV KLF+Q  +R ++I+TEV     + +   WRLSGR+ +     IKPY+V T F  D + GL++ Q D FSI  WDILL A+FP   G+   + PAPPV P
Sbjct:   78 FNAPKLSSKLDLKT--LAVALDAELYEKEWFVTGNVNPIYFADSFRFEDPDVKLDGIEDYARGVYKLFDQNTARAEIIATEVSEKTPNTVTCTWRLSGRVKIGPGLTIKPYIVYTDFTVDPNSGLITLQEDRFSIPQWDILLSALFPFLIGN-VASPPAPPVEP 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig15.2473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLC2_ECTSI1.190e-8883.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBW5_9PHAE5.450e-8485.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A383W0Z3_TETOB1.140e-4254.97Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A250WW06_9CHLO1.290e-3952.00Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7J7PWC3_9CHLO1.940e-3951.66Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
R1EZP5_EMIHU1.470e-3551.95Uncharacterized protein n=3 Tax=Emiliania huxleyi ... [more]
A0A7S3ZJJ4_9STRA1.690e-3149.63Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A6T8H729_HEMAN2.960e-3144.08Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7R9ZLF1_9STRA4.200e-3148.63Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
B7G0N2_PHATC1.320e-3043.90Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig15contigP-fluviatile_contig15:1637736..1643928 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score261.2
Seed ortholog evalue3e-67
Seed eggNOG ortholog2880.D7FLC2
EggNOG OGs2D8NW@1,2S4PV@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF2358
Ec32 orthologEc-12_007600.1
Exons5
Model size1465
Cds size435
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815657.8714821-UTR-P-fluviatile_contig15:1637735..16379121622815657.8714821-UTR-P-fluviatile_contig15:1637735..1637912Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1637736..1637912 +
1693562761.3693223-UTR-P-fluviatile_contig15:1637735..16379121693562761.3693223-UTR-P-fluviatile_contig15:1637735..1637912Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1637736..1637912 +
1622815657.8820338-UTR-P-fluviatile_contig15:1638266..16383021622815657.8820338-UTR-P-fluviatile_contig15:1638266..1638302Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1638267..1638302 +
1693562761.3810573-UTR-P-fluviatile_contig15:1638266..16383021693562761.3810573-UTR-P-fluviatile_contig15:1638266..1638302Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1638267..1638302 +
1622815657.9352343-UTR-P-fluviatile_contig15:1643111..16439281622815657.9352343-UTR-P-fluviatile_contig15:1643111..1643928Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1643112..1643928 +
1693562761.4492373-UTR-P-fluviatile_contig15:1643111..16439281693562761.4492373-UTR-P-fluviatile_contig15:1643111..1643928Porterinema fluviatile SAG_2381UTRP-fluviatile_contig15 1643112..1643928 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815657.8919215-CDS-P-fluviatile_contig15:1638302..16384221622815657.8919215-CDS-P-fluviatile_contig15:1638302..1638422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1638303..1638422 +
1693562761.3918161-CDS-P-fluviatile_contig15:1638302..16384221693562761.3918161-CDS-P-fluviatile_contig15:1638302..1638422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1638303..1638422 +
1622815657.9014604-CDS-P-fluviatile_contig15:1639154..16392221622815657.9014604-CDS-P-fluviatile_contig15:1639154..1639222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1639155..1639222 +
1693562761.4028378-CDS-P-fluviatile_contig15:1639154..16392221693562761.4028378-CDS-P-fluviatile_contig15:1639154..1639222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1639155..1639222 +
1622815657.911563-CDS-P-fluviatile_contig15:1639436..16395701622815657.911563-CDS-P-fluviatile_contig15:1639436..1639570Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1639437..1639570 +
1693562761.4212463-CDS-P-fluviatile_contig15:1639436..16395701693562761.4212463-CDS-P-fluviatile_contig15:1639436..1639570Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1639437..1639570 +
1622815657.9245489-CDS-P-fluviatile_contig15:1642998..16431111622815657.9245489-CDS-P-fluviatile_contig15:1642998..1643111Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1642999..1643111 +
1693562761.4371026-CDS-P-fluviatile_contig15:1642998..16431111693562761.4371026-CDS-P-fluviatile_contig15:1642998..1643111Porterinema fluviatile SAG_2381CDSP-fluviatile_contig15 1642999..1643111 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig15.2473.1prot_P-fluviatile_contig15.2473.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig15 1638303..1643111 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig15.2473.1

>prot_P-fluviatile_contig15.2473.1 ID=prot_P-fluviatile_contig15.2473.1|Name=mRNA_P-fluviatile_contig15.2473.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=145bp
MKPAQMAAAVDAGLRRNGWFVTGRVDASLFSDAFSFSDPQVSLTGVDKYA
EGVAKLFNQEESRCDVISTEVEGDNIVVRWRLSGRINLPFNPPIKPYVVT
TTFETDSEGLLSTQRDEFSIAGWDILLHAVFPGHPFGAEPAPPV*
back to top

mRNA from alignment at P-fluviatile_contig15:1637736..1643928+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig15.2473.1 ID=mRNA_P-fluviatile_contig15.2473.1|Name=mRNA_P-fluviatile_contig15.2473.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6193bp|location=Sequence derived from alignment at P-fluviatile_contig15:1637736..1643928+ (Porterinema fluviatile SAG_2381)
CTGGTACGTAATTCCGCCGCAGCCACATGCGAGCTTTCCCCCGAAGAGAA ATTGTGCAGCAATGAGAGGAGCACACAATCTCTGCCTGCTCTGGCTCCTT ATGGGGACCAAACTCTTGGGAAATACCAAGAAACAGCTACAGTCGTCCAG CAAACAAACTTCGGGGGGATGTAACACGTGAAGCGTACAGATTGGGGGGT GATTTGCGCAAAATTATTGGGTAACCACTGGTGGTGTTGCGGATTCTCCC ACACTCCCTAGGGAATCGACCTTTAGCTCCTGTCTCTTGCCAAGTGCTTA TACTTTTTTTATTGCGTCAAGCAGTCACAGATTTTTTTTTTTGCGCTGAG GTTTCCCTTTTGGAATCGTGGCCAACATGAGTCTGCCTTTTCGTTGCGAA ACTGACGGTGGTACCCTCTCCGTTGTTGCGTGCGGCAGGAGGCAAACCCT TGACTAGGTGCAGGAGGCGAGGCATTCGCGTAGAATGTGGTGATCAAAAT TCGAATATCGTCGATACTGCCCATACGACAGGTATTCAACGTAGGACAGA AGGCGAAGAGAACGGGGATGAAGCCGGCGCAGATGGCAGCCGCCGTAGAC GCGGGCCTCAGACGCAACGGTTGGTTTGTTACTGGAAGAGTCGACGCGTC CCTGTTCAGCGATGCATTTTCGTTCTCGGATCCTCAGGTGAACGGGTAGT TGAGCCGCGCATGCCGGCCGGCCAAGAGAAACAAATCAACTTGAGGCTTT TGCCGTGGGTGGATGAAATGAAATTTCCATGCAGATGCTCGAGACCTTGA TGTGGATGACGGGTGTGTAACGCATTTCTCTGCTACTAACACGATTTGGA TTAATTGCCCAAGGAAATTATCGTTGGTTGCGGAAGATATCATACCCCCT GGGTCAGTTCTTGAAGCTCGATGTCTCGACAGCGAGAGGTTGCCTAGCAT CGAACGATGCGTCACTACGAAGCCCTCAACAACTTCCCTCGAAATCCGCT CCGTTTGACGAACTACCTCTTTACCCCGGAACGAATTGAGCGTTGAAAAT AGCCCCGAGTGTACGACATCATATGCGACCTACAGTAGCGCAGTATGACT CAATTTTGTACGCTTACTTGTCGGAGGAAATTATCTCGACGTTTTCATCG GCACGAATTGGTTCATCGGCCGAGTGCAGCAAAGTGCAGAGCGCTAGCCT TTGCGCTTTTTCCTTGTGTAATTGCAAAGCCACATGCGCCGTCGAAGCCT TCAGCAGTCGCGAGTCAGCGCATGATACCGCTGTGCGTTTATTCAGCCCT CGCCCCACGAGGGTCCTCGCAGACGTATCGAAGGCCCCAGGGTGACTTTC CCCGGCGTTTCCCGCGCGTTGAGGCTGAACTTTTGGTTTTCCCCGGCGCG GCCCAATCGCCGGCCCCAGGTATCCCTCACCGGAGTCGACAAGTACGCAG AAGGCGTGGCGAAGCTCTTTAACCAGGAAGAGTCCAGGTGCGTGGGCCCG GTGCAACATAAGTACTTCGGTGGTCGTCGCCGGTCTGGTTTGAGCGATCC GGAGTGAGCTCGCGGTTGCAAAGAAGCGGGCAGAAACAGTGGGCTAGGTA TCTCACTGCGACCCTTTTCTGTTCGACACCCGAAGACCGATCGAGCTCCC CGCATCAGGAGATGGATCCGCTTTAATTGCGATCTCCTGTTCCTTCTGCA GGTGTGACGTTATTTCCACCGAGGTGGAAGGGGACAACATCGTCGTGCGC TGGCGTCTCTCCGGGAGGATCAATTTGCCGTTCAACCCGCCGATCAAGCC GTACGTCGTGACCACCACTTTCGAGACAGACTCAGGTACGGCAGGGGTGG TGCTTTTCGGCGGGGGGCGTACTCATGTTTTGCGTGCCTTAGTTGTTAGA CCATTGACCACGCGTCCTCGAGAGGACGGAGCAGTGTTCCCGCAGGATCG ACCACCGATGGCCAATCGTTTCTTCCTACTTTGCCAAAGGTGGCTCAAAA ATGTTTTCCCTAACCTGTCTACTTTATACCTGTCCTTCCTAGGCCACATC TTACACCCGAGTACCGCTACCGTCTTCTCCTCTTTGTTCCATGCCTCAAA CTTCTCTCTATACCGACTGTCTACTTTTTCCAGCTCAACCATGTACCCTT CTCTCTCCTGATCGTATAACTGGCATTCCGCAACTACATGTACCCGGTCT TCGCATTCGGCGCCGCAGTCACATTTGAACTTGTCTTCGTCGTCGTTTAC CTTCCTAAACCTCCTTCTACGTTCCCTTAGGTCAATGTCGCCCGTTCTAA ATTTGCCCTTCATCTTTGTCCCTTCATCCAATGGTCCGTTCAGGTACTCC TTGAACCCTATTCATTCGTTCAGCCTTCCGTACACTTCTAGAACCTCCTT TTCCTTGGTCTCTTTCCGCAAGCTCTGGTCTTCTCTATTTTCAAAGGCTT CTGAGATGCTCTTCGTGTACCCTTCTAAGCTTTCCGCTCCCCTCGTCTCC CGTTCGTCAATATATAGCCCACTCTACACTCCCTGTACAACCTTAGCCCA CTCAATGGGTTGTCTACCCTTGGCCTTGTTTACCCATCTCGCCTCCCAAG CTATTCTCGGTAACCTCTCCTTTCCCATGTTTTCCAAACGGTATTGCCAT GTCAACTTCCTCCTGTCTCTTCCCGTTCTTAAGGAGTTAATCCCCAAGTC TGCTCTTACTGCTGCGTTACTTGTGCGCTGGGAGCATCCTACAATGATCT TCGCTGCTTTCATCTGTGCTGCCTCTAACTCTGCTACTATTTTCTTGTTC CCTTCCCAAACTTCTCCCGCGTACTCTAGTGGCGGGATGATAGCACTTCT CAGAATGGTCATTTTGACGCGTGTATCATGGTGCCGGTCTGCTAGGATTG GGTGCAACTTCCCTCCCCTTGCTTTGCCCTTGTCCGCCATTTTGTGCATG TGTGTATCCCATTTACAGTCTTTTGCTATCTCTACTCCAAGGTATGTGTA TTTTCCCACTCTTGGCAGCTCCTTGTCCCCCCATGTCCACTTGGTACCTA CTTCCTCGTCACCATCTTCGTTGCATACCATTACGGCACACTTTGGGACG TTGGCCGAGAATCTCCACTTATCAGCATAGGCCTTCGCTGCGTTAATCTG TAGTTGGAGCCCCTCAGGCGTGTCCGACATGCCAACAAAGTCGTCAGCAA ATAGCAGTCCCGATACCGAGGTTTCCCCTACTTCTATCCCTTCCCTACCG CCTCTACCTCTTTCAGTAAGTCGTTGATGAATACCTGGAACAACGTTGGT GACATTGTGTACCCCTGTGGGACCCCCTGCTCAATGTCGAAGAACCTCGA GAGTTCTCCATCTAACATCACGGCGCTTTTCGTGCTCTCTGTCATATTCT TAATCATTCTCCACATCTTCCCGTTTATCCCATACTTCGCCTACTTTTTC CAGAGCCCATTTCTCCATACTGTATCATACGCTTTCTGAACGTCTAGGAA AAAGCAGTATGTCGGCTTTCCCACCCTCTTCCGACCTTGTATGATCCTCC CTGCCGTGTATAGGTGATCTCCACACCCCCTAGCCCTCCTGAAACCTGCT TGGCCCTCACTAATTCTCTTTTCCATCTCCAGTACTCGTACTATTCTGTT GTTGAGGATCTTGAAGAACACTTTCCCTACTGTGCTCAACAGGGTGATTA CCCTATAGTTTCCTGGGTCAGTCTTATCTCCTTTCTTAAAACAGGTTCAC CACCACCCCTTCCCTCCACCTACTCGGTGCGTATTCGTTTTCCCATACCC AGTTGAACAACAGCACCATCATCTGAATCATCCCCTCCCCCCCGAACTAC ATGATTTCGCTCACTATCCCGTCTACCCCTGCGGCCTTGTGACACTGCAG TTTTTTCACACAGCTCTCAACCTCTTCCTCGGTGAACTTCTTTTGGAGCT CTGCATTCCCAACTTCCTCCATCGAGCTCTCACTTCTGCTTGGGCCCATG CGTCTAACTCTTCCTTGAATACTTGGTCGAAGTCTGCCTTTTCCGACGGC ACCTCGAGTCTCCTATAGTGTCCTGCTAGTACCTGCCTTTTGTCCTTGCC ACTGCTGACTAGTTTGCCGTCTACGCCTCGCAATGTTTCTACTCCTGTTT CCCCCCCATTCTCATTCTTATTTACCAATCCATTAATTCCCTGCCACATC TGTTTTACGCTACCCTCCAACCCCCGTTCGCTTCCTGCACCACTTCGTCC CAGTTGCCTTTCTTCTTCTTTTTCACTACTCTATTCACATGTTTCCTCTT GGCTCTGTAGGTTTCCCAACTCTCCTCTGTCTTCTCATCCATGTGCCGCT TAAACAGTTCTCTTCGTTCTCCTACTTCTTCCCTCAACTCTTCGTCCCAC CACTTAACCGCCTGACCACACCGGACCATATTTTTCCATGTCACTTCCTC TGCGGTTGTGTTCACTATGTTTTCCCATCCTGCGATTACTCGTCCCCTGT TACTTGAACGTCCTCTTCCTCTCCCGCTTTCCCCATCAGTTCCCTTACTT GTTCTACGCTGTCTGCATTCCTTTAGTGGAAATCAGCACGTACTCTCTCG TTTCCCAGTCGTTCTACTCTCCATCTGAATACATTCCTCGTCTTCGTACT CTTGACCCTCTTGTTAGGTGTTGTTTTAGCCCAAATAAGGAAGTGGTCAG TTGTGCCTACGTCTACCTTGCTTACTTGCAATCTTGGGATCCGCTTTGTT TCTCTGTCTACCAGGATGTAGTCAAGAATCGAGAATTCCCCGCAACTTGC CCGCTGTCTGGTATACTGCGGGGTGTCCTCCCTTCTCCTATTGTTTGTCG CCATCAGCTCGTTACTGCCTAGGAAATCAAGCGTTTTTTCCCCGTTGGCA TCTACTCGGTTTTCTCCGTATTGCCCTATCACCTGCCCCCCCCGACTAGC TTTCCCAACTCGAGAGTTGAAATCGCCTACCATGACAACGTCTCCCTTCC TCTTGAACTTCTATACATCTTCCCCCACTTGAAATTCTTCTGCGCCTTAT ATGCGACTTTCTTCGACGACGGCGGCAGAGGGGGGGGTAGGGCAGGAGTG ACGGTAGTTAAGACAAAAGTATTGATTGCCCAGTGATCGTCGATGCGCGT ATGGAAAGCTTGCGGTGTTTCTTTTTTTCACTTGGCAATCGCCTCATTTC TTGTCCCGCTGTGCGCCGCTGCCGTGCGCCTGTTTTCCCGCCTGCTAATT TTCGCTGCACCAGAGGGTCTCCTAAGCACACAGCGCGATGAGTTTTCCAT TGCTGGCTGGGACATATTGCTCCATGCCGTATTTCCCGGCCACCCTTTCG GAGCGGAACCTGCCCCTCCTGTCTAGCCTGCGGATATCTGATGAGGCGTG TGGAGTGGCGTTTGCGTCAACAGTTTTTCTGCATTTCGTCTACGTGTTTT TGCGTGGTATTCAGGTTTTCAGCAGTAGTAGAACCGGAATGACATAATTC TGCTCGAAAGGTGCAACCCGCCCCCAGGAGAGATATTTTTTGTGAATCCC TTTTTGAAGGTCAACGCACCGTGAATTAACTTCATTTAACATCAGGCCTT CATTTGGTGCCGTGGAGTTGCCGAGGTTGGATCGTTCCGTTTTCGTCCTG TGCATACAGGACTTGCTTCTGCTTCGGCCCGATTGCAGCAAGATACCGTT GAAGGTGATTTGTCGCTCGCACATATTTTATGTGGTTGTGTATTGATCTT CGAGGACAGCATTTCTATATTGTGTTTTGAAAGGAAAGTCACCTACGCGA AGAGCCGGCTTGTCTTGAGTCGTCGTAGAGGCTGATTATACAACCAGCTC GAAAAGTAGGCACTTGTGGGATCAACGGTGTAGTCTTGTGAGTGCACGGC CGGGCAGCCAGGACAACCGACCAAATCTTAAACATGGAAGATTTCCGCGG GGGAAGGGTTTGAGTGTATGAGGAAACGAATGCGCAGGGCTGCACAGGGC TACTGTTCACGAAAATACATCGGCGCTATGCCACCGCAGACCAGAGGTTT TGAGTAATTGCTTTGAAAATTGATGATGTCGTATGACTGCACCCGACAAG AAGTTCGCGCGTTCAGCGGCTGATTGGAAGGTTACCACGCGTGGCAGCCA CCAGAGCAAGGATATTCGCTGTAATCCGATGTAGCCAACAAGC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig15:1637736..1643928+

>mRNA_P-fluviatile_contig15.2473.1 ID=mRNA_P-fluviatile_contig15.2473.1|Name=mRNA_P-fluviatile_contig15.2473.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=870bp|location=Sequence derived from alignment at P-fluviatile_contig15:1637736..1643928+ (Porterinema fluviatile SAG_2381)
ATGAAGCCGGCGCAGATGGCAGCCGCCGTAGACGCGGGCCTCAGACGCAA
CGGTTGGTTTGTTACTGGAAGAGTCGACGCGTCCCTGTTCAGCGATGCAT
TTTCGTTCTCGGATCCTCAGATGAAGCCGGCGCAGATGGCAGCCGCCGTA
GACGCGGGCCTCAGACGCAACGGTTGGTTTGTTACTGGAAGAGTCGACGC
GTCCCTGTTCAGCGATGCATTTTCGTTCTCGGATCCTCAGGTATCCCTCA
CCGGAGTCGACAAGTACGCAGAAGGCGTGGCGAAGCTCTTTAACCAGGAA
GAGTCCAGGTATCCCTCACCGGAGTCGACAAGTACGCAGAAGGCGTGGCG
AAGCTCTTTAACCAGGAAGAGTCCAGGTGTGACGTTATTTCCACCGAGGT
GGAAGGGGACAACATCGTCGTGCGCTGGCGTCTCTCCGGGAGGATCAATT
TGCCGTTCAACCCGCCGATCAAGCCGTACGTCGTGACCACCACTTTCGAG
ACAGACTCAGGTGTGACGTTATTTCCACCGAGGTGGAAGGGGACAACATC
GTCGTGCGCTGGCGTCTCTCCGGGAGGATCAATTTGCCGTTCAACCCGCC
GATCAAGCCGTACGTCGTGACCACCACTTTCGAGACAGACTCAGAGGGTC
TCCTAAGCACACAGCGCGATGAGTTTTCCATTGCTGGCTGGGACATATTG
CTCCATGCCGTATTTCCCGGCCACCCTTTCGGAGCGGAACCTGCCCCTCC
TGTCTAGAGGGTCTCCTAAGCACACAGCGCGATGAGTTTTCCATTGCTGG
CTGGGACATATTGCTCCATGCCGTATTTCCCGGCCACCCTTTCGGAGCGG
AACCTGCCCCTCCTGTCTAG
back to top