mRNA_P-fluviatile_contig1.160.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI) HSP 1 Score: 258 bits (659), Expect = 3.880e-82 Identity = 138/162 (85.19%), Postives = 150/162 (92.59%), Query Frame = 1
Query: 1 MKFTSTVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
MKFT TV VLACVGSA AFVP+ALP ARMS+ TTMSA++ P+SR DFLK+A GAAA+LGLAAPALAE+DNPVVPFLGGGDKIDVNNANVRAYIKL GMYP+AAGKIVSNGPYSSVSEIY+IKGL+NEEKAAIKKHES+FITMDPQAMYTIDRINNGLYR
Sbjct: 1 MKFT-TVAVLACVGSASAFVPHALPAARMSARTTTMSAES---PASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.830e-54 Identity = 101/163 (61.96%), Postives = 129/163 (79.14%), Query Frame = 1
Query: 1 MKFTSTVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAV-LGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
MK T +V+ A G AQAFV P+A + S+ +M+AQ P R FLK+A AA V + +AAPALAEIDNPVVPFLGGGDK+D+NNANVRAYIK+PGMYP AGK+VSNGPY++V+++YNIKGL+ +EK+ +KK+ES+F+T++PQ MY IDRINNGLYR
Sbjct: 1 MKVTGAIVLAAACG-AQAFVA---PSAGVRSTQLSMTAQ----PVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN) HSP 1 Score: 156 bits (394), Expect = 8.340e-43 Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 1
Query: 139 RADFLKTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
R +FL GA +AAPALA+ D +P+LGG KID+NNAN+R Y KLPGMYP AAGKI SNGPY SVS++YNIKGL + EKAAIKK+ES+FIT++P MY IDR+NNGLYR
Sbjct: 22 RRNFLGKVAGAVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: K0TEZ3_THAOC (PS II complex 12 kDa extrinsic protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEZ3_THAOC) HSP 1 Score: 149 bits (376), Expect = 5.400e-40 Identity = 82/160 (51.25%), Postives = 106/160 (66.25%), Query Frame = 1
Query: 16 TVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAVLGLAA---PALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
T ++ + +A AF PNA P A Q A ++ A ++ +GAAA G AA A A +D V +LGGG +DVNNANVRAY++LPGMYP+AAGKIV++GPY SV+++YNI GLT+ EK IKK+ESKF+ DP A Y IDR+NNGLYR
Sbjct: 3 TAIIATLISTAAAFAPNAQPAA-------------QTALNAEAADRRSFLGAAAAFGAAAIPAAASARVDYENVAYLGGGSTVDVNNANVRAYLRLPGMYPSAAGKIVTHGPYKSVADVYNIPGLTSAEKEVIKKYESKFVAKDPAAEYVIDRVNNGLYR 149
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA) HSP 1 Score: 149 bits (375), Expect = 7.820e-40 Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 28 LACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFLKTAVGAAAV-LGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
LA V +A AFVP + + TT NA + R +F A GAAAV AAPA A +D + +LGG +D+NNANVR Y+K+PGMYP AAGKIVSNGPY SVS++YNI GLT+ EK AIKK+ES+F+ + P A Y IDRINNGLYR
Sbjct: 7 LATVATAAAFVP------QQAGPQTTA----LNAEAGRREFFGKAAGAAAVAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S1XZL8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZL8_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.510e-38 Identity = 68/102 (66.67%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 187 LAAP--ALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
LAAP A+A++D +P+LGG +KID+NNANVR Y KLPGMYPNAA KI SNGPY SVS++Y+IKGL+ +EK+ IKK+ES+ IT++P AMY IDR NNGLYR
Sbjct: 52 LAAPFAAMADVDYAGLPYLGGSEKIDINNANVRVYAKLPGMYPNAAAKITSNGPYKSVSDVYSIKGLSEKEKSVIKKYESRLITLEPSAMYVIDRTNNGLYR 153
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S3L326_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L326_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.130e-37 Identity = 72/116 (62.07%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 139 RADFLKTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
R +FL AV AAA L + ALA D + +LGG D ID+NNANVR Y+KLPGMYP+AAGKI +NGPY+SV +IYNI GLT++EK +KK+ESKF + P A Y IDRINNGLYR
Sbjct: 32 RREFLSAAVVAAAGLAVPGSALAVRDYENLAYLGGSDTIDINNANVRVYLKLPGMYPSAAGKIAANGPYNSVGDIYNIPGLTSKEKEVMKKYESKFTALKPSADYVIDRINNGLYR 147
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S4RBC4_9STRA (PS II complex 12 kDa extrinsic protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RBC4_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.130e-37 Identity = 70/122 (57.38%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 124 NAPSSRADFLKTAVGAA-AVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
NA + R +F TA AA G+AAPA A +D + +LGG + +D+NNANVR Y+K+PGMYP AGKIVSNGPY+SV+++Y IKGLT EK +KK+ES+F T P Y IDRINNGLYR
Sbjct: 47 NAEAGRREFFGTAAAAAIGAFGVAAPASAVVDYEALAYLGGSNVVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVADVYKIKGLTEAEKGVLKKYESRFTTFSPSPDYVIDRINNGLYR 168
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.770e-37 Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 124 NAPSSRADFLKTAVGAA-AVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
NA + R +F +A AA G+AAPA A +D + +LGG +D+NNANVR Y+K+PGMYP AGKIVSNGPY+SVS++YNIKGLT+ EK +KK+ES+F P A Y IDRINNGLYR
Sbjct: 29 NAEAGRREFFGSAAAAAIGAFGVAAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Match: A0A7S2TDD2_PROMC (PS II complex 12 kDa extrinsic protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TDD2_PROMC) HSP 1 Score: 140 bits (352), Expect = 1.030e-36 Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 1
Query: 124 NAPSSRADFL-KTAVGAAAVLGLAAPALAEIDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPNAAGKIVSNGPYSSVSEIYNIKGLTNEEKAAIKKHESKFITMDPQAMYTIDRINNGLYR 486
NA + R +F K A AAV+G AAPA A ID + +LGG +D+NNANVRAY+K+PGMYP AGKIVSNGPY+SV +IY+IKGLT+ E +KK+E +F+ P Y IDRINNGLYR
Sbjct: 10 NAEAGRREFFSKAAAATAAVVGAAAPANAVIDYENIGYLGGSSIVDLNNANVRAYLKMPGMYPTVAGKIVSNGPYASVKDIYSIKGLTSAEADVLKKYEDRFVAKTPSPDYVIDRINNGLYR 131 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.160.1 >prot_P-fluviatile_contig1.160.1 ID=prot_P-fluviatile_contig1.160.1|Name=mRNA_P-fluviatile_contig1.160.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=163bp MKFTSTVVVLACVGSAQAFVPNALPTARMSSSATTMSAQNQNAPSSRADFback to top mRNA from alignment at P-fluviatile_contig1:2102115..2107091+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.160.1 ID=mRNA_P-fluviatile_contig1.160.1|Name=mRNA_P-fluviatile_contig1.160.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4977bp|location=Sequence derived from alignment at P-fluviatile_contig1:2102115..2107091+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2102115..2107091+ >mRNA_P-fluviatile_contig1.160.1 ID=mRNA_P-fluviatile_contig1.160.1|Name=mRNA_P-fluviatile_contig1.160.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=978bp|location=Sequence derived from alignment at P-fluviatile_contig1:2102115..2107091+ (Porterinema fluviatile SAG_2381)back to top |