prot_P-fluviatile_contig14.2313.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2313.1
Unique Nameprot_P-fluviatile_contig14.2313.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length670
Homology
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BLAST of mRNA_P-fluviatile_contig14.2313.1 vs. uniprot
Match: D7G3V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V0_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.310e-37
Identity = 86/149 (57.72%), Postives = 99/149 (66.44%), Query Frame = 0 
Query:  524 ASGDPPLQPAASSPPRLVEGEQEGIDGELRQQGGG--GQAXXXXXXXXXGDREETGAWPGVAVAGWDKEETRDGLYEEMLKGVVGVSTGLHSYWMEPLMGLSKPETRKVAEQLTIDNKLGYRSQKGGVVSKGSLLYYVLEQKEKHPTKV 670
            AS  PPL   A + P  V G   G+DG  +++GGG  G           G  E TGAW G   AGW+++E  + +YEE LK +VGVSTG H YWM PLM L+KPETRK A QLT DNKLGYRS KGG VSKG+LL YVLEQKEKHPTKV
Sbjct:   95 ASEGPPL---ALASPETVGGAAAGLDGSGQREGGGANGMGGGEGWSGEGGAAETTGAWSGGG-AGWERDEAGEDVYEENLKALVGVSTGPHGYWMGPLMALTKPETRKTAMQLTADNKLGYRSSKGGPVSKGTLLQYVLEQKEKHPTKV 239
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BLAST of mRNA_P-fluviatile_contig14.2313.1 vs. uniprot
Match: A0A6H5K8V0_9PHAE (MutS_I domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V0_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.470e-27
Identity = 62/86 (72.09%), Postives = 70/86 (81.40%), Query Frame = 0 
Query:  585 AGWDKEETRDGLYEEMLKGVVGVSTGLHSYWMEPLMGLSKPETRKVAEQLTIDNKLGYRSQKGGVVSKGSLLYYVLEQKEKHPTKV 670
            A W+++E  + +YEE LK +VGVSTG H YWM PLM L+KPETRK A QLT DNKLGYRS KGG VSKG+LL YVLEQKEKHPTKV
Sbjct:  409 ARWERDEAEEDVYEENLKALVGVSTGPHDYWMGPLMALTKPETRKTAMQLTADNKLGYRSSKGGPVSKGTLLQYVLEQKEKHPTKV 494
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BLAST of mRNA_P-fluviatile_contig14.2313.1 vs. uniprot
Match: A0A484MEN7_9ASTE (AP2/ERF domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484MEN7_9ASTE)

HSP 1 Score: 54.3 bits (129), Expect = 5.090e-5
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0 
Query:  128 FRGVRGGPKGKWQARL--VSKGQLKQLGTFESELDAARAYNKAAQSLHGAAAKLNTLP--DDLPATAPAS 193
            FRGVR    GKW A +   ++G    LGTF + L+AARAY++AA+ L+G +AKLN LP  DD  +++P+S
Sbjct:   14 FRGVRQRTWGKWVAEIREPNRGARVWLGTFNTSLEAARAYDEAARKLYGPSAKLNLLPAADDRSSSSPSS 83
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BLAST of mRNA_P-fluviatile_contig14.2313.1 vs. uniprot
Match: A8JAT5_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JAT5_CHLRE)

HSP 1 Score: 52.8 bits (125), Expect = 9.360e-5
Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:  119 ASSRYVPSEFRGVRGGPKGK-WQARLVSKGQLKQLGTFESELDAARAYNKAAQSLHGAAAKLN 180
            AS + V S++RGV    K K WQA + S G+   LG+F SE DAARA++KAA  L G  AKLN
Sbjct:   32 ASDKPVSSKYRGVCWNRKNKRWQAAINSGGKYVYLGSFLSEYDAARAFDKAAVKLRGLRAKLN 94
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3V0_ECTSI2.310e-3757.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8V0_9PHAE1.470e-2772.09MutS_I domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A484MEN7_9ASTE5.090e-548.57AP2/ERF domain-containing protein n=3 Tax=Cuscuta ... [more]
A8JAT5_CHLRE9.360e-552.38Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availablePANTHERPTHR31677:SF41coord: 102..237
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 102..237
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..670
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 127..188
e-value: 1.3E-10
score: 51.3
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 127..182
score: 13.208
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 126..182
e-value: 1.2E-11
score: 46.2
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 127..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2757154..2760110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2313.1mRNA_P-fluviatile_contig14.2313.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 2757115..2760110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2313.1 ID=prot_P-fluviatile_contig14.2313.1|Name=mRNA_P-fluviatile_contig14.2313.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=670bp
MRLAPLAAVSCSYASCLPSASFSVVIPHRAGAQRAHCVCCGGGKLLCQAR
ASGTPLLPAAPGTTMALLPLRTRQLTLARPTARRMLRQRVMVLMSSKNSE
QQQQQQQQQQAATAAKRRASSRYVPSEFRGVRGGPKGKWQARLVSKGQLK
QLGTFESELDAARAYNKAAQSLHGAAAKLNTLPDDLPATAPASALTIEAP
VAGAAAATAAEEAPTPGADTAPLTVAAGRPQSGQRSDSMPSLAAENGGDN
NGNHGETLMNAAEEEAKGSNESAVTSPAADVQYPDEFHFRDLEEIPGSTN
SPLWGEGDGGGELKSAWAATIEPTTAVGSSGGSGGAVHDVVVHDGKGSGR
AGSVKLAQQVGSGEVSNTGGGSSLVGDVVVAEARREGGTRVPLVGSEESR
PGGDSLRLRQEQEGTAIPTRPVSTPSLDTSAGTGRKASGSALVAGMASVG
GEPGAVVVIGSGHQRRSSTLASSQGEAATPAVAAAAAAAATTPEAPAPTN
IGAVSDAAGAPAGTVAASAATEKASGDPPLQPAASSPPRLVEGEQEGIDG
ELRQQGGGGQAGAGGVVGSGGDREETGAWPGVAVAGWDKEETRDGLYEEM
LKGVVGVSTGLHSYWMEPLMGLSKPETRKVAEQLTIDNKLGYRSQKGGVV
SKGSLLYYVLEQKEKHPTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf