mRNA_P-fluviatile_contig14.2264.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2264.1
Unique NamemRNA_P-fluviatile_contig14.2264.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI)

HSP 1 Score: 1268 bits (3280), Expect = 0.000e+0
Identity = 671/845 (79.41%), Postives = 708/845 (83.79%), Query Frame = 1 
Query:  112 AGAVDEEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYKDVADGEKQDAVISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLPNTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEETGAPQSTSRGLEMAPPFSASPXXXXXVA-SYPAVFANGSSLLDGVDLASMAGIQKLEGLLKGKSFLAGPRPGAEDACVHAAASSLPAAVLEAAPAVKGWLHTVGFFSPSMRASW---------------------------------CGVGGAAAPAGASARD----------GKKAEAPAAPVAAARSVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMAAAKAAKDANKKVDRSQIVFEVKPWEAEADLKGLFEKITQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIESFGEEVQSVDMTTMNRL 2514
            AGA DEEELDPTQYFANRSRAIAQLE+EGTNPYPHKFH T SIP+FVAK+KDV  GEKQ+ V+SLAGRIV KREQGKLLFYG+KADGA+VQVMASL DYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTT+VLL+PCLHMLPN+R GLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDL+LDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADY+DLM+MTE+MISGMVKKICGSFKIKYQLNPGE+PLEVDFTPPFRRVSM+DGLEEVLKVKLPALDDPEID KLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCV+PTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNP+VQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEET A QSTSRG+ MAP  +   XXX   A SYP +FA+GSSLL  VDLAS  GIQKLEGLLKGKSFL GPRPG+EDACV+AAASS+P  +L  +PAVKGWL+TVGFFSPSMRASW                                   VGG     G    D          G++ EAPA+    +R+                                          QMAAAK+AKDANKKVDRSQIVFEVKPWEA ADLKGLF+KI +TEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIE F +EVQSVDMTTMNRL
Sbjct:   51 AGAADEEELDPTQYFANRSRAIAQLEEEGTNPYPHKFHVTISIPEFVAKFKDVEVGEKQEDVVSLAGRIVKKREQGKLLFYGMKADGASVQVMASLSDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTMVLLSPCLHMLPNSREGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLNLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYEDLMSMTEQMISGMVKKICGSFKIKYQLNPGEDPLEVDFTPPFRRVSMMDGLEEVLKVKLPALDDPEIDGKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVHPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPMVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEETAAQQSTSRGIGMAPAAAXXXXXXAKAAVSYPPLFASGSSLLKDVDLASTTGIQKLEGLLKGKSFLGGPRPGSEDACVYAAASSVPPPLLATSPAVKGWLNTVGFFSPSMRASWGXXXXXXXXXXXXXXXXXXXXXXXXXXXDKSRAVEVGG-----GDEGDDVDSLFGDDEAGEEGEAPASGAGMSRA-----------------------------------------EQMAAAKSAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRKTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIEKFEDEVQSVDMTTMNRL 849
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A835Z3J2_9STRA (Lysine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J2_9STRA)

HSP 1 Score: 953 bits (2464), Expect = 0.000e+0
Identity = 513/801 (64.04%), Postives = 598/801 (74.66%), Query Frame = 1 
Query:  121 VDEEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYKDVADGEKQDAVISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLPNTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEETGAPQSTSRGLEMAPPF---SASPXXXXXVASYPAVFANGSSLLDGVDLASMAGIQKLEGLLKGKSFLAGPRPGAEDACVHAAASSLPAAVLEAAPAVKGWLHTVGFFSPSMRASWCGVGGAAAPAGASARDGKKAEAPAAPVAAARSVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMAAAKAAKDANKKVDRSQIVFEVKPWEAEADLKGLFEKI-TQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIESFGEEVQSVDMTTMNR 2511
             +EEELDPTQY ANR +AI  +E +G NPYPHKF TTTS+P FVA Y  +  G      +SLAGRI TKR QGKL FY +  DGA+VQ+M+SLGDYE  EEAFW+ + LLRRGD++GVTG PGKSKKGELS+FPT I LL+PCLHMLP    GLKNQE RYRQRYLDL+ ND+ RRVF+VRSKVV+ IR+FL+ERGFLEVETPMMNM+ GGATA+PFVTHHN+L LD+FMR+APELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADY DLM MTE MISGMVK ICGS+KIKYQ +P EE +E+DFTPPF+RVSM+ GLEE+LKVK+PALDDP  DT L+ L+ EH +E  PP TTAR+LD LVG+FLEDKC++PTFI DHPEIMSPLAKYHRS PG+TERFELFVCGRELCNAYTELN+P VQR RF  Q+ AS  GDDEAQVHDE+FC AMEYGLPPT GWGVGVDRLTMFLS+KNNIKEVLLFPAMKP+E  A  +  R  +   P    +A       VA      A GS    GVD A+ +G+++LE  L G  FLAG  P AEDACV+   + +PA +L+   AVKGWL+T   F+P+ R++W G   +A PA           + A   A    +                       XXXXXXXXXXXXXXXXXX MAAAKAAKD  KKV+RSQ+V EVKPW++E DLK L+ KI  +   DGLVW E   + PVAFG+ KLV+SCV+ D KVG++DITD IE   + VQS  + +M R
Sbjct:   56 AEEEELDPTQYHANRVKAITAMETKGLNPYPHKFTTTTSLPAFVAAYSSMEAGAHGTDTVSLAGRIKTKRVQGKLYFYDMSGDGASVQIMSSLGDYES-EEAFWEVHDLLRRGDIVGVTGSPGKSKKGELSIFPTRITLLSPCLHMLPKGHSGLKNQEVRYRQRYLDLIMNDDVRRVFEVRSKVVDGIRTFLNERGFLEVETPMMNMIPGGATARPFVTHHNELKLDMFMRIAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYNDLMDMTEAMISGMVKNICGSYKIKYQPSPNEEEVEIDFTPPFKRVSMVSGLEEILKVKMPALDDPNADTVLRGLIKEHAIELPPPHTTARMLDALVGEFLEDKCIHPTFICDHPEIMSPLAKYHRSLPGMTERFELFVCGRELCNAYTELNHPGVQRSRFEAQAAASAQGDDEAQVHDEDFCVAMEYGLPPTGGWGVGVDRLTMFLSNKNNIKEVLLFPAMKPDENAAAAAAQRAAKAHRPAVHTAAQVQAQAAVAKCAPAIATGSQKFQGVDFATESGLKQLEAALIGSRFLAGHSPSAEDACVYVVVAKVPAQLLKGYHAVKGWLNTCALFAPAARSAWAG---SATPAXXXXXXXXXXTSKAKAAADDDDI---------------DDMFGDDDXXXXXXXXXXXXXXXXXXXMAAAKAAKDKKKKVERSQVVLEVKPWDSETDLKALWAKIMAEVTADGLVWAEGFNIAPVAFGIMKLVISCVIEDEKVGLDDITDPIEDMSDLVQSTQLVSMQR 837
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A6S9HA25_HETAK (Lysine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HA25_HETAK)

HSP 1 Score: 827 bits (2136), Expect = 2.310e-284
Identity = 481/803 (59.90%), Postives = 563/803 (70.11%), Query Frame = 1 
Query:  127 EEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYKDVADGEKQDAV-ISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLPNTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEETGAPQSTSRGLEMAPPFSASPXXXXXVASYPAVFANGSSLLDGVDLASMAGIQKLEGLLKGKSFLAGPRPGAEDACVHAAASSLPAAVLEAAPAVKGWLHTVGFFSPSMRASWCGVGGAAAPAGASARDGKKAEAPAAPVAAARSVAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMAAAKAAKDANKK------VDRSQIVFEVKPWEAEADLKGLFEKITQTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIESFGEEVQSVDMTTMNRL 2514
            +EELDPTQYFANR+ AI  +E  G NPYPHKF  T+S  +F+  +    DG     V +SLAGRI T R QGKL FY +KADG  VQVM+SL DY  GEEAF   N  LRRGDLIGV G PGKSKKGELS+FP+ IVLL+PC HMLP    GLKNQE RYRQRYLDL+ N +TR VFQ R+KV+NYIR FLD R FLEVETP MNMVAGGATA+PFVT+HNDLD+ L+MR+APELYLK L++GGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADY DLMAMTEE++SGMV  I G++ I+Y   PG EP+ +DFTPPF+R+SMI+GLEE + V LPAL DP     L AL  +H + C  P + ARLLDKLVG FLED   NPTFI DHPE+MSPLAKYHRS+PGLTERFELF+C RE+CNAYTELNNP VQR+RF +Q++ + AGDDEAQV DE+FCTA+EYGLPPT GWG GVDR+TMFLSDKNNIKEVLLFPAMKP++    Q      +     S S       A+           ++GVDL +      LE  L    FLAG  PG  DA V A  + +    L A P V  W  T G F+P+  A     G AA          +K                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + A AKA  DA KK      V+R+QIV E+KPWEA+ DL  L E+I + + DGL WGE  KLVPVAFG+KKL++SCVV D KV  +D+T+ IE+  + VQSVD+ TM+++
Sbjct:   49 DEELDPTQYFANRTAAIQAMEAAGINPYPHKFRVTSSFAEFIEAHGGCEDGAHLTGVRVSLAGRIDTARGQGKLYFYNLKADGLKVQVMSSLADYAEGEEAFRAINTALRRGDLIGVEGSPGKSKKGELSIFPSKIVLLSPCFHMLPKGFTGLKNQEVRYRQRYLDLIMNPDTRGVFQTRAKVINYIRRFLDSRDFLEVETPNMNMVAGGATARPFVTYHNDLDMFLYMRIAPELYLKELIVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYHDLMAMTEELMSGMVLAIRGTYVIQYTPEPGAEPVTIDFTPPFKRISMIEGLEEAMGVTLPALGDPAFAPTLSALCEQHEVLCPEPRSAARLLDKLVGHFLEDNITNPTFIMDHPELMSPLAKYHRSKPGLTERFELFICQREVCNAYTELNNPAVQRERFAEQARQAAAGDDEAQVLDEDFCTALEYGLPPTGGWGCGVDRITMFLSDKNNIKEVLLFPAMKPQDDA--QKPKPPADFVKLCSKSAANLGEAAAAXXXXXXXXXXVNGVDLPA------LEARLAAGRFLAGAAPGPADAEVLAQLAGVSVRALRAYPRVNAWYQTAGLFTPAALAR----GPAAXXXXXXXXXXEK-----------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVDPAAAKAARAKALADAKKKKEKAKPVERTQIVVEIKPWEADTDLNALAEEIKKIQKDGLNWGEGIKLVPVAFGIKKLIMSCVVEDEKVCADDVTEPIEALEDFVQSVDIATMSKI 822
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A448YVM4_9STRA (Lysine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVM4_9STRA)

HSP 1 Score: 744 bits (1920), Expect = 4.680e-254
Identity = 376/626 (60.06%), Postives = 464/626 (74.12%), Query Frame = 1 
Query:  124 DEEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYKD-VADGEK-QDAVISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLPNTRG-----GLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEETGAPQSTSRGLEMAPPFSASPXXXXXVASYPAVFANGSSLLDGVDLASMAGIQKLEGLLKGKSFLAGPRPGAEDACVHAAASSLPAAVLEAAPAVKGWLHTVGFFSPSMRASW 1980
            +EE  DP Q+  NR  AIAQ+EKEG NPYPHKFH    IPDF A+++     GEK +D V+S+AGRIV+ R QGKL FY +  DGA VQ+M+    YE  EE F K + +L+RGD++GVTGYPGKSK G+LSVFP T++LL+PCLHM+P ++G     G+ N ETRYRQRYLDL+ N+E R +F++R+ ++  +R +LD+R FLEVETPMMNM+ GGATAKPF+T+HNDL +DL++RVAPELYLKMLV+GGLDRVYEIGRQFRNEGIDLTHNPEFTT EFYQAYADY DLM M EE++SG+VKKICGS+KIKY   PG + +E+DFTPPF+R+SMI+GLEE +   LP +DDPEI+TKL ALL EH LEC PP TTARLLD LVG+FLED  ++PTFIT+HP+IMSPLAKYHRS+  LTERFELF  GREL NAYTELNNPVVQR+ FL+Q+KA  AGDDEA V D+ F TA+E+GLPPT G+G+G+DRLTMFLS+K NIKEVLLFPAMKP +       +   +    FS              + A  SSL  GVD+ S   + KL+  L GKSFL G  P  +DA +         A + +   V  W   +G F+P +RA+W
Sbjct:   66 EEEITDPNQFLENRRNAIAQMEKEGMNPYPHKFHVDFRIPDFNAEFETKTTAGEKIEDKVVSIAGRIVSVRHQGKLFFYDLNGDGAKVQIMSDPKTYED-EEEFAKIHRMLKRGDIVGVTGYPGKSKNGQLSVFPKTMILLSPCLHMVPFSKGDSCLGGITNMETRYRQRYLDLIVNEEVRDIFEIRAGIITEVRKYLDDRHFLEVETPMMNMIPGGATAKPFITYHNDLSMDLYLRVAPELYLKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTLEFYQAYADYNDLMDMCEELVSGLVKKICGSYKIKYAPKPGMDEVEIDFTPPFKRISMIEGLEERMNTTLPKMDDPEIETKLLALLKEHNLECTPPHTTARLLDTLVGEFLEDNIIHPTFITEHPQIMSPLAKYHRSKNFLTERFELFAAGRELANAYTELNNPVVQRELFLEQAKAGSAGDDEAMVLDDSFVTALEHGLPPTGGFGLGIDRLTMFLSNKANIKEVLLFPAMKPSDEQMALIAANAPKSDSDFS--------------LMALMSSLSLGVDVTSDDALDKLDETLNGKSFLXGTAPSKDDAELLEKVLKADEAAIASRSNVAAWCKLLGMFTPEVRATW 676
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A7S2A0E2_TRICV (Lysine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0E2_TRICV)

HSP 1 Score: 733 bits (1891), Expect = 3.910e-251
Identity = 354/525 (67.43%), Postives = 431/525 (82.10%), Query Frame = 1 
Query:   88 ARSKAKARAGAVDEEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYKD-VADGEK-QDAVISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLP-----NTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEE 1641
            A  K K  AG  ++E+LDPT Y ANR   +A ++KEG NPYPHKFH    IPD+V++++  V+ GE   ++ +S+AGRIV+ R QGKL+FY +  +GA VQVM+ L  ++G E+AF+K +  ++RGD+IG+ GYPGKSK GELS+FPT I LL+PCLHMLP     +++GG+ N ETRYRQRYLDL+ N + RR F++RSKV+N IR +LDER F+EVETPMMNM+ GGATAKPF+T+HNDL +DL++RVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADY+DLM MTEEM+SGMVK I G +KIKY   PG   +E+DFTPPF+R+SM++GLEE + VKLPALDDP+ID KL  LL +H LEC+PP TTARLLD  VG+FLED  ++PTFIT+HP+IMSPLAK HRS+PGLTERFELF  GRELCNAYTELNNPV+Q QRFL+Q+ A   GDDEA V D+ F TA+E+GLPPT GWG+GVDRLTMFLS+KNNIKEVLLFPAMKP +
Sbjct:   45 APKKKKFVAG--EDEDLDPTAYKANREAMVASIQKEGGNPYPHKFHVDYRIPDYVSEFEPKVSPGESLTESQVSIAGRIVSARGQGKLIFYDLHGEGAKVQVMSDLKTFDGDEDAFFKIHSTIKRGDVIGLKGYPGKSKNGELSIFPTEIQLLSPCLHMLPFAKGGSSQGGITNMETRYRQRYLDLIVNHDVRRTFEIRSKVINSIRKYLDERHFIEVETPMMNMIPGGATAKPFITYHNDLSMDLYLRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYEDLMNMTEEMVSGMVKDITGDYKIKYSPKPGAPEVEIDFTPPFKRISMMEGLEEAMGVKLPALDDPDIDAKLVELLEKHQLECSPPHTTARLLDTFVGEFLEDDIIHPTFITEHPQIMSPLAKDHRSKPGLTERFELFAAGRELCNAYTELNNPVIQYQRFLEQAAAGKEGDDEAMVLDDSFVTALEHGLPPTGGWGLGVDRLTMFLSNKNNIKEVLLFPAMKPTD 567
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A6S8QE04_9STRA (Lysine--tRNA ligase n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8QE04_9STRA)

HSP 1 Score: 728 bits (1880), Expect = 1.430e-249
Identity = 348/531 (65.54%), Postives = 427/531 (80.41%), Query Frame = 1 
Query:  127 EEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKY-KDVADGEK-QDAVISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLPNTRG-----GLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKP-------EETGAPQSTSRGLE 1677
            +E+LDPTQY ANR  A+  +EK+G NPYPHKFH    +PD+  ++     DG + +++ +++AGRI + R QGKL FY ++ DGA VQVM+ L  Y  GEEAF+K +  ++RGD+IGV G+PGKS+KGELS+FPT I LL+PCLHMLP  +G     G+ N ETRYRQRYLDL+ N + R+ F++R+K++N +R +LD+R FLEVETPMMNM+ GGA A+PF+T HNDL++DLF+R+APELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADY DLM MTEEMISG+VK + G +KIKY   PG   +E+DFTPPF+R+SM++GLEE +  KLP LDDPEIDTKL ALL EHG+EC+PP TTARLLD LVG++LED  ++PTFIT+HPEIMSPLAKYHRS+ GLTERFELF  GREL NAYTELNNPVVQ QRFL+Q++A   GDDEA V D+ F TA+E+GLPPT GWG+G+DRLTMFLS+KNNIKEVLLFPAMKP       ++  AP + S G E
Sbjct:   47 DEDLDPTQYKANREAAVVAMEKDGINPYPHKFHVDYRLPDYNTEFGPKTEDGARIEESQVTVAGRIHSVRGQGKLFFYDVRGDGAKVQVMSDLKTYAAGEEAFFKIHRTVKRGDIIGVKGFPGKSRKGELSIFPTEITLLSPCLHMLPFAKGDSQMGGITNMETRYRQRYLDLIVNTDVRKTFEIRAKIINGVRKYLDDRHFLEVETPMMNMIPGGAVARPFITFHNDLNMDLFLRIAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYNDLMDMTEEMISGLVKDVTGGYKIKYSPKPGAPEVEIDFTPPFKRISMMEGLEEAMNTKLPELDDPEIDTKLSALLEEHGIECSPPHTTARLLDTLVGEYLEDNIIHPTFITEHPEIMSPLAKYHRSKKGLTERFELFAAGRELANAYTELNNPVVQYQRFLEQAQAGKEGDDEAMVTDDSFVTALEHGLPPTGGWGLGIDRLTMFLSNKNNIKEVLLFPAMKPTDEQMQAQKKNAPSAVSEGEE 577
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A7R9VIV5_9STRA (Lysine--tRNA ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VIV5_9STRA)

HSP 1 Score: 719 bits (1855), Expect = 1.510e-245
Identity = 344/511 (67.32%), Postives = 418/511 (81.80%), Query Frame = 1 
Query:  127 EEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKY--KDVADGEKQDAVISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLP----NTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEE 1641
            +++LDPT Y ANR   +A ++K+G +PYPHKFH    +PD+ A++  K  A    ++  +S+AGRIV+ R QGKLLFY ++ DG+ +QVM+ L  ++G EEAF+  +  +RRGD+IGV G+PGKSK GELS+FPT I LL+PCLHMLP    +++GG+ N ETRYRQRYLDL+ N + RR F +R KV+  +R +LD+R FLEVETPMMNM+ GGATAKPF+T+HNDL +DL++RVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADY DLM MTEEM+SGMVK I G +KIKY   PG   +E+DFTPPF+R+SMI+GLEE + VKLPALDDPEID KL  +L E  LECAPP TTARLLD+LVG++LED  V+PTFIT+HP+IMSPLAK HRS+PGLTERFELF  GREL NAYTELNNPV+Q QRFL+Q+ AS  GDDEA V D+ F TA+E+GLPPT GWG+G+DRLTMFLS+KNNIKEVLLFPAMKP +
Sbjct:   79 DDDLDPTAYKANREAMVAAMQKDGVDPYPHKFHVDYRLPDYCAEFDPKTKAGERIEETQVSVAGRIVSSRGQGKLLFYDLRGDGSKLQVMSDLKTFDGDEEAFFAIHRSIRRGDVIGVKGFPGKSKNGELSIFPTHIQLLSPCLHMLPFPKGDSQGGISNPETRYRQRYLDLIVNHDVRRTFVIRDKVIKSVRKYLDDRHFLEVETPMMNMIPGGATAKPFITYHNDLSMDLYLRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYNDLMDMTEEMVSGMVKDITGGYKIKYSPKPGVPEVEIDFTPPFKRISMIEGLEEAMGVKLPALDDPEIDAKLVKILEERELECAPPHTTARLLDELVGEYLEDNIVHPTFITEHPQIMSPLAKNHRSKPGLTERFELFAAGRELANAYTELNNPVIQYQRFLEQAAASKQGDDEAMVLDDSFVTALEHGLPPTGGWGLGIDRLTMFLSNKNNIKEVLLFPAMKPND 589
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A8K1CEE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEE6_PYTOL)

HSP 1 Score: 720 bits (1859), Expect = 2.970e-245
Identity = 375/640 (58.59%), Postives = 458/640 (71.56%), Query Frame = 1 
Query:   88 ARSKAKARAGAVDEEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYKDVADGEK-QDAVISLAGRIVTKREQG-KLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLPNTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPE-IDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDK---CVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEE---TGAPQSTSRGLEMAPPFSASPXXXXXVASYPAVFANGSSLLDGVDLASMAGIQKLEGLLKGKSFLAGPRPGAEDACVHAAASSLPAAVLEAAPAVKGWLHTVGFFSPSMRASW 1980
            A  K KA   AVD+E+LDPT YFANR + +  LEKEG NPYPHKFH +TS+PDF AKY  V  G++  D V+S+AGR+ +KR  G KL+FY ++ADG  +QVM+S  +YE  E+AF+K + +LRRGD++GV GYPGKSKKGELS+FPT +VLL+PC+HMLP    GLK Q+TRYRQRYLDL+ NDETR VFQ R+K++N++R FLD + FLEVETPMMNM+ GGATAKPFVT+HNDL ++L+MRVAPELYLK LVIGGLDRVYEIGRQFRNEGIDLTHNPEFT+CEFY AYADY DLM MTE++ S MVK+I GS+ I  Q  P EEP+ +DFTPPFRR+ M+  +EE   VK+P +DDPE     L  L+T++G++C+PP + ARLLDKLVG F+ED       P FI D P   SPLAKYHR  PGLTERFELF+ G E+CNAYTELNNP VQR+RF++Q + + AGDDEAQ HDE FCTAMEY LPPT GWG G+DRLTMFL++K NIKEVLLFPAMKP+E   T A  + S                        + A GS     VDL      ++LE  L+  +FL G +P  EDA V      +   VL     V+ W + VG F   +RA W
Sbjct:   50 AGPKKKAPGIAVDDEDLDPTAYFANREKMLVALEKEGINPYPHKFHVSTSLPDFHAKYSSVEAGKQLDDVVVSVAGRLHSKRASGAKLVFYDLRADGVKIQVMSSADNYES-EDAFFKIHSVLRRGDIVGVKGYPGKSKKGELSIFPTELVLLSPCMHMLPKAHYGLKLQDTRYRQRYLDLILNDETRNVFQTRAKIINFVRKFLDNQHFLEVETPMMNMIVGGATAKPFVTYHNDLHMNLYMRVAPELYLKQLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTSCEFYMAYADYNDLMEMTEKLFSDMVKEITGSYAITIQREPEEEPITIDFTPPFRRIKMVPAVEEATGVKIP-IDDPEKCRPLLDELVTKYGIDCSPPRSIARLLDKLVGHFIEDNREYWTKPFFIMDQPVYNSPLAKYHRETPGLTERFELFLAGAEICNAYTELNNPKVQRERFIEQMEQAAAGDDEAQPHDEAFCTAMEYALPPTGGWGAGIDRLTMFLTNKFNIKEVLLFPAMKPDEQVNTAAEGAAST-----------------------LTATGS-----VDL------EELESRLEKLTFLGGAKPSKEDALVFEKVKVIGKDVLAKHTNVEKWCNFVGAFPNELRAKW 653
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A7S0CF35_9STRA (Lysine--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CF35_9STRA)

HSP 1 Score: 717 bits (1852), Expect = 4.270e-245
Identity = 345/514 (67.12%), Postives = 414/514 (80.54%), Query Frame = 1 
Query:  121 VDEEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYK-DVADGEKQDAVISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLP------NTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEE 1641
            V+EEELDPT+Y ANR   I QLEK G NPYPHK+     IPDF   +   +ADGE+ D  +S+AGRI + R QGKL FY ++ +G+ +Q+M+ +  Y   +E F K + L++ GD+IG+TGYPGKSK+GELS+FPT I LL+PCLHMLP      +  GG+ N ETRYRQRYLDLM N   R  F VRSK+++ +R +L+ER FLEVETPMMNM+ GGA AKPF+THHNDL+LDL++R+APELYLKMLV+GGLDRVYEIG+QFRNEGIDLTHNPEFTTCEFYQAYADY+DLM MTEEM+ GMVK I G +KI Y   PG   +EVDFTPPF+R+SM+ G+EE L  KLPALDDPEID KL+A+L +HG EC+PPLTTAR+LD+LVG+ LE   V+PTFIT+HPEIMSPLAKYHR++ GLTERFELF  GREL NAYTELNNPVVQ QRFLDQ+KAS  GDDEA V D+ F TA+E+GLPPT GWG+G+DRLTMFL++K NIKEVLLFPAMKP E
Sbjct:   74 VEEEELDPTKYKANREATILQLEKSGVNPYPHKYSVDYRIPDFCTTFSPQIADGERLDVSVSVAGRITSVRGQGKLYFYDVRGEGSKIQIMSDVKTYSDPDE-FAKIHKLIKPGDIIGITGYPGKSKRGELSMFPTAIQLLSPCLHMLPFAKGGGSNSGGITNMETRYRQRYLDLMVNHGVRDTFIVRSKIISSVRQYLNERHFLEVETPMMNMIPGGAVAKPFITHHNDLNLDLYLRIAPELYLKMLVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYQAYADYEDLMDMTEEMVGGMVKDITGGYKIMYSPKPGMPEVEVDFTPPFKRISMMSGIEEALNEKLPALDDPEIDEKLKAILDKHGYECSPPLTTARMLDELVGELLESNIVHPTFITEHPEIMSPLAKYHRTKKGLTERFELFAAGRELANAYTELNNPVVQYQRFLDQAKASSMGDDEAMVMDDSFVTALEHGLPPTGGWGLGIDRLTMFLTNKANIKEVLLFPAMKPSE 586
[Close]
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Match: A0A7S3QG11_9STRA (Lysine--tRNA ligase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QG11_9STRA)

HSP 1 Score: 706 bits (1823), Expect = 1.210e-240
Identity = 345/516 (66.86%), Postives = 408/516 (79.07%), Query Frame = 1 
Query:  118 AVDEEELDPTQYFANRSRAIAQLEKEGTNPYPHKFHTTTSIPDFVAKYKD-VADGEKQDA--VISLAGRIVTKREQGKLLFYGIKADGANVQVMASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVLLAPCLHMLPNTRG-----GLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIRSFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLKMLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTEEMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKVKLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNPTFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQRQRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLSDKNNIKEVLLFPAMKPEE 1641
            A +EE LDPT Y ANR + + QLEKEG+  YPHKFH    +PDF  ++ +   DGE+ +   ++S+AGRI + R QGKL FY I+ DGA +Q+M+ L  Y  GEEAF K +  ++RGD+IGV G  GKSKKGELS+FP  + LL+PCLHMLP  +G      L N ETRYRQRYLDL+ N E R  F+VR+KV+N +R +L++R FLEVETPMMNM+ GGA A+PF+T+HNDL +DL++R+APELYLKMLV+GGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADY DLM MTEEM+SGMVK I G  KIKY   PG+  +E+DFTPPF+R+SM+DGL E +K  LPALDDP+I  KLQALL  H LECA P T ARLLD  VG+FLED  VNPTFIT+ PEIMSPLAK HRS+ GLTERFELFV GREL NAYTELNNPVVQ QRFLDQ+K   +GDDEA V DE F TA+E+GLPPT GWG+G+DRLTMFLS+KNNIKEVLLFPAMKP +
Sbjct:   55 AKEEEILDPTAYKANREQTVKQLEKEGSTAYPHKFHVDYRLPDFATEFMEKTTDGERLEGATIVSVAGRIESVRGQGKLFFYDIRGDGAKLQIMSDLKTYATGEEAFKKIHRTIKRGDVIGVRGIAGKSKKGELSIFPVEMQLLSPCLHMLPQNKGDSAQAALTNPETRYRQRYLDLIVNHENRNTFEVRAKVINGVRKYLNDRHFLEVETPMMNMIPGGAVARPFITYHNDLSMDLYLRIAPELYLKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYNDLMDMTEEMLSGMVKDITGGHKIKYSPKPGDPEVEIDFTPPFKRISMMDGLNEAMKTTLPALDDPDIIPKLQALLEIHELECAAPQTAARLLDTFVGEFLEDNIVNPTFITEQPEIMSPLAKNHRSKKGLTERFELFVAGRELANAYTELNNPVVQMQRFLDQAKDQASGDDEAMVMDESFVTALEHGLPPTGGWGLGIDRLTMFLSNKNNIKEVLLFPAMKPND 570
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM77_ECTSI0.000e+079.41Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z3J2_9STRA0.000e+064.04Lysine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A6S9HA25_HETAK2.310e-28459.90Lysine--tRNA ligase n=1 Tax=Heterosigma akashiwo T... [more]
A0A448YVM4_9STRA4.680e-25460.06Lysine--tRNA ligase n=1 Tax=Pseudo-nitzschia multi... [more]
A0A7S2A0E2_TRICV3.910e-25167.43Lysine--tRNA ligase n=1 Tax=Trieres chinensis TaxI... [more]
A0A6S8QE04_9STRA1.430e-24965.54Lysine--tRNA ligase n=4 Tax=Ditylum brightwellii T... [more]
A0A7R9VIV5_9STRA1.510e-24567.32Lysine--tRNA ligase (Fragment) n=1 Tax=Pseudictyot... [more]
A0A8K1CEE6_PYTOL2.970e-24558.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0CF35_9STRA4.270e-24567.12Lysine--tRNA ligase n=1 Tax=Proboscia inermis TaxI... [more]
A0A7S3QG11_9STRA1.210e-24066.86Lysine--tRNA ligase n=1 Tax=Chaetoceros debilis Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2277856..2288930 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1121.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LM77
Preferred nameCARS
KEGG rclassRC00055,RC00523
KEGG koko:K01866,ko:K01868,ko:K01873,ko:K01875,ko:K01883,ko:K03232,ko:K04567,ko:K15410
KEGG ReactionR02918,R03650,R03658,R03662,R03663,R03665,R08218
KEGG Pathwayko00970,ko05168,map00970,map05168
KEGG ModuleM00359,M00360
GOsGO:0000049,GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005853,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006414,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008135,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.lysyl-tRNA aminoacylation
EggNOG OGsCOG1190@1,COG2092@1,KOG1668@2759,KOG1885@2759
EC6.1.1.1,6.1.1.11,6.1.1.16,6.1.1.3,6.1.1.6,6.1.1.9
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03012,ko03016,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionLysyl-tRNA ligase
Ec32 orthologEc-01_005790.1
Exons16
Model size3523
Cds size2130
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2264.1prot_P-fluviatile_contig14.2264.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2278951..2287924 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815627.1964297-UTR-P-fluviatile_contig14:2277855..22780251622815627.1964297-UTR-P-fluviatile_contig14:2277855..2278025Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2277856..2278025 +
1693562541.715494-UTR-P-fluviatile_contig14:2277855..22780251693562541.715494-UTR-P-fluviatile_contig14:2277855..2278025Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2277856..2278025 +
1622815627.2106829-UTR-P-fluviatile_contig14:2278391..22785091622815627.2106829-UTR-P-fluviatile_contig14:2278391..2278509Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2278392..2278509 +
1693562543.4044876-UTR-P-fluviatile_contig14:2278391..22785091693562543.4044876-UTR-P-fluviatile_contig14:2278391..2278509Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2278392..2278509 +
1622815627.2224402-UTR-P-fluviatile_contig14:2278851..22789501622815627.2224402-UTR-P-fluviatile_contig14:2278851..2278950Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2278852..2278950 +
1693562545.7468455-UTR-P-fluviatile_contig14:2278851..22789501693562545.7468455-UTR-P-fluviatile_contig14:2278851..2278950Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2278852..2278950 +
1622815627.4115443-UTR-P-fluviatile_contig14:2287924..22889301622815627.4115443-UTR-P-fluviatile_contig14:2287924..2288930Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2287925..2288930 +
1693562548.3175223-UTR-P-fluviatile_contig14:2287924..22889301693562548.3175223-UTR-P-fluviatile_contig14:2287924..2288930Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2287925..2288930 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815627.2372463-CDS-P-fluviatile_contig14:2278950..22789981622815627.2372463-CDS-P-fluviatile_contig14:2278950..2278998Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2278951..2278998 +
1693562545.7597783-CDS-P-fluviatile_contig14:2278950..22789981693562545.7597783-CDS-P-fluviatile_contig14:2278950..2278998Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2278951..2278998 +
1622815627.2561533-CDS-P-fluviatile_contig14:2279856..22800151622815627.2561533-CDS-P-fluviatile_contig14:2279856..2280015Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2279857..2280015 +
1693562545.7739418-CDS-P-fluviatile_contig14:2279856..22800151693562545.7739418-CDS-P-fluviatile_contig14:2279856..2280015Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2279857..2280015 +
1622815627.2689886-CDS-P-fluviatile_contig14:2280732..22807951622815627.2689886-CDS-P-fluviatile_contig14:2280732..2280795Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2280733..2280795 +
1693562545.7846482-CDS-P-fluviatile_contig14:2280732..22807951693562545.7846482-CDS-P-fluviatile_contig14:2280732..2280795Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2280733..2280795 +
1622815627.2814257-CDS-P-fluviatile_contig14:2281790..22818501622815627.2814257-CDS-P-fluviatile_contig14:2281790..2281850Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2281791..2281850 +
1693562545.797074-CDS-P-fluviatile_contig14:2281790..22818501693562545.797074-CDS-P-fluviatile_contig14:2281790..2281850Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2281791..2281850 +
1622815627.293809-CDS-P-fluviatile_contig14:2282584..22828151622815627.293809-CDS-P-fluviatile_contig14:2282584..2282815Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2282585..2282815 +
1693562545.8083248-CDS-P-fluviatile_contig14:2282584..22828151693562545.8083248-CDS-P-fluviatile_contig14:2282584..2282815Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2282585..2282815 +
1622815627.307146-CDS-P-fluviatile_contig14:2283087..22833031622815627.307146-CDS-P-fluviatile_contig14:2283087..2283303Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2283088..2283303 +
1693562545.821145-CDS-P-fluviatile_contig14:2283087..22833031693562545.821145-CDS-P-fluviatile_contig14:2283087..2283303Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2283088..2283303 +
1622815627.3194287-CDS-P-fluviatile_contig14:2283664..22837511622815627.3194287-CDS-P-fluviatile_contig14:2283664..2283751Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2283665..2283751 +
1693562545.8320842-CDS-P-fluviatile_contig14:2283664..22837511693562545.8320842-CDS-P-fluviatile_contig14:2283664..2283751Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2283665..2283751 +
1622815627.3302722-CDS-P-fluviatile_contig14:2284134..22842751622815627.3302722-CDS-P-fluviatile_contig14:2284134..2284275Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2284135..2284275 +
1693562545.84014-CDS-P-fluviatile_contig14:2284134..22842751693562545.84014-CDS-P-fluviatile_contig14:2284134..2284275Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2284135..2284275 +
1622815627.342438-CDS-P-fluviatile_contig14:2284683..22848841622815627.342438-CDS-P-fluviatile_contig14:2284683..2284884Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2284684..2284884 +
1693562545.8481557-CDS-P-fluviatile_contig14:2284683..22848841693562545.8481557-CDS-P-fluviatile_contig14:2284683..2284884Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2284684..2284884 +
1622815627.355102-CDS-P-fluviatile_contig14:2285257..22854731622815627.355102-CDS-P-fluviatile_contig14:2285257..2285473Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2285258..2285473 +
1693562545.8563113-CDS-P-fluviatile_contig14:2285257..22854731693562545.8563113-CDS-P-fluviatile_contig14:2285257..2285473Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2285258..2285473 +
1622815627.3660989-CDS-P-fluviatile_contig14:2285914..22863571622815627.3660989-CDS-P-fluviatile_contig14:2285914..2286357Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2285915..2286357 +
1693562546.479297-CDS-P-fluviatile_contig14:2285914..22863571693562546.479297-CDS-P-fluviatile_contig14:2285914..2286357Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2285915..2286357 +
1622815627.3790874-CDS-P-fluviatile_contig14:2286845..22870231622815627.3790874-CDS-P-fluviatile_contig14:2286845..2287023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2286846..2287023 +
1693562547.3238177-CDS-P-fluviatile_contig14:2286845..22870231693562547.3238177-CDS-P-fluviatile_contig14:2286845..2287023Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2286846..2287023 +
1622815627.3889341-CDS-P-fluviatile_contig14:2287587..22876351622815627.3889341-CDS-P-fluviatile_contig14:2287587..2287635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2287588..2287635 +
1693562548.285531-CDS-P-fluviatile_contig14:2287587..22876351693562548.285531-CDS-P-fluviatile_contig14:2287587..2287635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2287588..2287635 +
1622815627.3986168-CDS-P-fluviatile_contig14:2287885..22879241622815627.3986168-CDS-P-fluviatile_contig14:2287885..2287924Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2287886..2287924 +
1693562548.306269-CDS-P-fluviatile_contig14:2287885..22879241693562548.306269-CDS-P-fluviatile_contig14:2287885..2287924Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2287886..2287924 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2264.1

>prot_P-fluviatile_contig14.2264.1 ID=prot_P-fluviatile_contig14.2264.1|Name=mRNA_P-fluviatile_contig14.2264.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=710bp
MASLGDYEGGEEAFWKTNGLLRRGDLIGVTGYPGKSKKGELSVFPTTIVL
LAPCLHMLPNTRGGLKNQETRYRQRYLDLMTNDETRRVFQVRSKVVNYIR
SFLDERGFLEVETPMMNMVAGGATAKPFVTHHNDLDLDLFMRVAPELYLK
MLVIGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYQAYADYQDLMAMTE
EMISGMVKKICGSFKIKYQLNPGEEPLEVDFTPPFRRVSMIDGLEEVLKV
KLPALDDPEIDTKLQALLTEHGLECAPPLTTARLLDKLVGDFLEDKCVNP
TFITDHPEIMSPLAKYHRSRPGLTERFELFVCGRELCNAYTELNNPVVQR
QRFLDQSKASVAGDDEAQVHDEEFCTAMEYGLPPTAGWGVGVDRLTMFLS
DKNNIKEVLLFPAMKPEETGAPQSTSRGLEMAPPFSASPPAAASVASYPA
VFANGSSLLDGVDLASMAGIQKLEGLLKGKSFLAGPRPGAEDACVHAAAS
SLPAAVLEAAPAVKGWLHTVGFFSPSMRASWCGVGGAAAPAGASARDGKK
AEAPAAPVAAARSVAPAPPAAAAVDEDDDVDNLFGDEEEEEEEGPASGAG
ESRREQMAAAKAAKDANKKVDRSQIVFEVKPWEAEADLKGLFEKITQTEI
DGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIESFGEEVQS
VDMTTMNRL*
back to top

mRNA from alignment at P-fluviatile_contig14:2277856..2288930+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2264.1 ID=mRNA_P-fluviatile_contig14.2264.1|Name=mRNA_P-fluviatile_contig14.2264.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11075bp|location=Sequence derived from alignment at P-fluviatile_contig14:2277856..2288930+ (Porterinema fluviatile SAG_2381)
CTGAAGGCGGAGGCAGCCGCGAAGAAGAAAGCGGCGAAAGATGCGGTCAA
GGCCAGCGCCGCGGCCGCCGCACCCCCCGCCTCCTCCGCCCGCTCAAAGG
CCAAGGCCAGGGCCGGCGCGGTCGACGAGGAGGAACTGGACCCGACCCAA
TACTTTGCGAACCGCTCGAGGTGCGCGCTGCATGCCGCGTGTGCGTTTTG
TCATGAAACCTGTGCTTCGGCGGCGCCTCGCCCGGCACTGCTGCTGCTGC
TGCTGCTGCTGCTTTCCATGGTTGTTTGAGTTTCTTCTCTTGCGTTTAAT
TGGTTGTTAATATGTAGCACGCGTCCTGTTTCTGTTCTTTCATGAGCATG
TTCTTTTCCGCGGTTCTTGTGCAGCGCTCCGGCTGGTGCTGGTGTGCCGT
CGGCCCCCATGTGCGTTCATTCCGCTCCCCCCCTAGCGGGAACAATGCTC
CGTGCTCTCGAGGACGCGTGGTCAATGGTCTAACAACGAAGGCATGCAAA
ACATGAGTACGCCCCCCTCGCGCTTCTCTTTCGCAGGGCGATCGCGCAGC
TGGAGAAGGAAGGGACGAACCCGTACCCCCACAAGTTCCATACGACCACC
AGCATCCCGGATTTTGTCGCCAAGTACAAGGACGTGGCGGACGGAGAGAA
GCAGGTGGGGGAGGGGGGGGGCGACTCATCACGGGGAATCACGGGGCGGT
CCGCTTCTTGACACGTGACGATCGGTATCGGTTTTGCTTCTTTTGGGAAC
CCTATCCCAGTCTTCGCTTCGCACGGTAAACTCAACCAGGGCGTTGCTTG
TGGCGGTAATCAAGTTGGTTGCGAATGCCACTTTCCATTAACAATTGCGA
ATTCACTTGATCATGTCTTGTTGTTCCAACGAGTTTGTTCACTACATGTG
GGTGGTATCCGAGGAGGGAGATGAGCAAGTTCGAATTCGGACGTTTTGTT
TTTTAGTTCTTTTCATGTAGTTTTGTTGTTCGTCTGCTTTTCGCAGGACG
CGGTCATCTCCCTGGCCGGACGGATCGTGACCAAGCGCGAGCAGGGCAAG
CTCTTGTTCTACGGCATCAAGGCGGACGGCGCCAACGTGCAGGTCATGGC
CTCGCTCGGCGACTACGAGGGAGGAGAGGAGGCGTTCTGGAAGGTGAGAT
GGGCTCCTTTTATGTGATCGACGCGGGGCGCAAGCTCGGATGGGTTAGGG
TGGGGGAAAAGGGGCTGGAGGGGGGGAGCGGAGGCAGGTTTGGCAGGTGC
ACAAATGTTGCGGCGTGGTCTACGCTCAAGGCATGGAGGTGCATAGGTAT
GGCGCGGATGGGATGGGTTACACAACGGCGCGAAGGCGCTACCGCTCGGC
GGCATCTTGTGCTCGGTTGCGTGGGGCGTCGGAGATCGGGTGCGTGCAAG
GAACACCCCGTCCTTGGTTTTCAATGTCCGGAGAGCGCCCGCAGGTTTTG
TGGTCTGTGAGTGGAGACGATGCCCAACCCTTGGAGAAACGTGCCTGTCT
TCGAATAGTGAAAAGAGCGGAAGAATGGATCAGTGGCCGGAGGCCAAGTA
CAAGCAGGCTAAAGTGCAAGCATGTTCAATATGCCCCCCCCGTCACGCGC
TTGCGGTTGTACCGCTTATCTCGCACCACCCTCCCCGTCATCAGTGACCG
CCGCtTTTTTTTTTTTCCCTTGCGATAAATGTGTGTCCCCAAGGATCATA
ACCGACGACAACTTGCCATGAACAACAACGTCGACCGAACGAAGGAAACT
CAAGCTCGTCCGTTCGCACGCAGAATAATGTCCGATCAGACCGAAGCACA
CCGGATCAAGCAAGCACATGAAAGACAACAAAATATCGAATCCTTTTGGA
CTGAACCGAATCAAGTTTTCCAGCGCCAAATCAATCAAACCAAACCAAAC
CAACCAAACCAAACTAAACCGGACCGAACCGAATAGAACAAACCAAACTA
AAAAACAATAACCCGAACAGAACCGAATCGAACCGAACCGAACTGAACCA
GACGAACGGGCTGCTGCGAAGAGGCGACCTGATCGGAGTCACGGGGTACC
CCGGCAAGTCCAAGAAGGGGGAGCTGTCCGTGTTCCCCACGACCATCGTG
CTCTTGGCGCCGTGTCTCCACATGCTCCCCAACACAAGAGGAGGGCTCAA
GAATCAGGAGGTGTGCGCATATGTTTTTGCGATGGGGCAGAGAGGGCGTG
GCTAGTTCTTTGCCCTACCGGAATTGGGGAGGGAGAGATAAAACGGAGTT
AGGCTGGCGCATTGATGAGGACCGGGTTTCGAGAGGGCGTGACGCAGGAG
CAGGTTTCCCGGGTATCCGTGTCCATCGCCGGCGGGAACTGTCACAGTGG
CAGAACTGTCTCAGTGGCTGACGGTCATGTTCCACCAACTGATGATTGTG
TGTCGCGTGGGCCTGATCAGCGCACTCCGCCTAGGCGAAGGGCAAGGATC
CTTCAGAGGAAGGAGGGGAGACGTCGGGCGAGGAAATGCGGGAGGGGGGG
TGCTGGCCAGGTGTGTGCCACGGCACCCTTGACTCGCCCTCCTCCAATCT
TGTCGCGAAGGATTGGCGCTGGTGTGGTGTGGGGCGGAAACCGGTGCGCT
TGAGACGCCCAAGCATTAGTCGCGGGTTGATTAACGTCAGGCGAAATCGT
TGCCTTGCCGTTGTGAGGCGGGGTCGCGGGGATCGATCACACTGTTGAAA
CGACACAGTCCCTTGCCTGGCAACGATCAACCGTTGCGCCTGGCTGCTTC
TGCTGCCCCTTGATCCGTTTGTTTGCTTCTCTCTCTATTCCGTTCACCGC
GGCGGCGAACGGTGTGCCGTTGTCTGCTACTTCGTTATCGATGACCTCGC
GGTCCGGCCGACACTCTCCTCCTGCAGACGCGCTATCGGCAGCGGTACCT
GGACCTCATGACTAACGATGAGACAAGACGGGTTTTCCAGGTTTGTACTT
GCTGTGCTAGCCGCGCGCATATGCGTTTGAGTGGCTGTGTGTGGAGGTGT
GAGAGAGCGAGAAATTTGAGATAGACAACCATACAGAGACGGGGTCGCGC
GGGCGCTgggggGGGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTA
GACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTC
TCACCGGACCAGGCTCTCACACCACCAAGCGCGAAGCGCCGTGAGGTATT
CGGCGAGTCGCATGAAGGGTGCGCTGCATCCTGCTAAGGGTGTTCGGCAT
CTTGTGCTTACTTCCTTGCATACGGATGACAACTGCGTATGGCTTTTTGT
ATTTTTCTGGTGCTTTCATTTCCAGAGACAGTTGTAAGCACTGTGTAACT
GCCTCGAGGGTGCTTGACCATTTTAACACAACGTGGTGCGATCATCCCCC
TTGCGCGGAGTGAGAGTTCTCCACTCCGCACAACATGATCTTCTCGACCA
CCATTATGGTTACCGCCAAAAAAAACAGAGGAAAAAAAAAGACGGTAACC
TGGCTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTACAACGTCGTTGCG
AAGCGACGAAAACCCAATCCCGATGGCAAACACCGAGGTGAGAGCCAACG
GGAGGGGCGCTGGGGGGGGGTGCATGTACTCAGATCAAGCTGAACTAACG
AGGTGACCGATTCACGACTTGAATCGGCGTCGGAAATCTGTATTATTGGT
CGCTGTAACGGTCGGATTGTATGTGGTCGCTGCTAAGGCTTCTCGGCCCA
TCTCTCCATCGTGTTGCTCCGTTCGACACATGCGATGGTCATGGCTTTTC
ATGCTCTTGCATGTGCGGCATCATACCGCAACAATGGCACCCGCACATCA
ACTTTGAACACATTCTTGTTCATCTATACTCCCCCTTCCCCGACGTTCGT
CGGCCCACCTTAACCCCCCGATTCCCGCCCCGCAGGTTCGCTCCAAGGTG
GTGAACTACATCCGCTCCTTTTTGGACGAGCGAGGCTTCCTAGAGGTGCG
TTTTCTTTATTGCATGTTTCTCCGGCTCAGGGAAGGCTTTGTGGAGAGAT
AGATGGCTTTTGGATCTCGATGTCGGACTTCAGACCTTGTTTCGGGTGGG
GGGTGCTGTGTGTGCTTGGGTGGAGGGGAGCGGAGCTTCGTGGTGTACTC
GGAATCATGCGTGCCGTAGTCGTTCGACACATGAAATGGTATTCTGCGAA
GCCGGTAAGAAGCGCGCCGTTTTTTTTGCCAAACCAGGCTTGCACTACCA
AGCTCTAAGCGCCGTGGCGAACTCGGCGAGGCGCATAAAGAGCGAGCTGC
ATCCTAGTAATATTGTTTGACTCAAGGTGTCCGAGGCTTGTGAATGGAAC
AAGAGGAGGGGGGAGAAATGAGAATCGTTGTTGGCCGCGGTCGGAGAGGA
GGAAGAAAAATTGTTTTCGGAATCGACGAGCTTTGTGCGCGACAAACCGC
ACCATTTTTCAAAAGAGCATGCCCCTTGTTTCTCCTTTTCATCTTGACAG
CCGCCACGTACGCTTCCTCGGTGCCCTTCAGGCGGCGTGCGAGGTCGAGT
CGCGATCACCAAGACATGATTTTTGTTTTTTTATCCCAATGCGTTTTTCG
TGCACGACACCTCATATCCCTACCTCTTCTAGGCACGACTCATTCCTCTT
CTTCTCACTTTCGATCCCTACTTCATCAGTCTGTGATCAATTCCTCTCCT
TCTTATGTCCTAATCCGATTTACTTTCAGGTTGAAACGCCCATGATGAAC
ATGGTGGCGGGAGGTGCCACGGCCAAACCGTTCGTGACGCACCACAATGA
CCTCGATCTGGACCTCTTCATGCGCGTGGCGCCCGAGCTGTACCTCAAGA
TGCTGGTCATCGGGGGGCTTGACCGTGTGTACGAGATCGGTCGGCAGTTC
CGCAACGAGGGGATCGACCTCACGCATAACCCGGAGTTCACCACTTGCGA
GTTTTACCAGGTACATTTGGATGGGATGGGATGGGATGGGATGGGGAAAT
GCAATCTACCGCTCATGTTACTGGGTTGGTTGGAATAGGACCGGACAACA
TTTTTTTCTCCGCTTTTGCCAACAGCCATTCAAAGTTTCGTTCTCTTCCC
AGCGTTGTAGCCACTGCTCCGCCCACCCTCGCGAGACTTACCCAAGACCA
CCAAGCTGAAGATGGTTACGTATTTCACGGATCTCGCCGTTCACGAAATC
CGCGGATGGGACGCGACGGGACGGTGCGGCAGGCGTACGCGGACTACCAG
GATCTGATGGCGATGACAGAGGAGATGATCTCCGGCATGGTGAAGAAGAT
CTGCGGCTCCTTCAAGATCAAGTACCAGCTCAACCCTGGGGAGGAGCCGC
TGGAGGTGGACTTCACGCCGCCGTTCCGACGTGTGAGCATGATCGACGGC
CTGGAGGAAGTGCTGAAGGTCAAGCTGCCCGCGCTCGATGACCCGGAGGT
ACGGGTTTCAGCCGGATGGATGGGCGGGAAGAGTGGGCCAGACAGAAGGG
GCGGGAGAAGGAGCGATGAGGGAGGAAAATGGATTCGGAAGTCTCAACGA
TGTGCGGAACACCTCGAATTTCGTTGTGCTAGGCGATGCGCGTACAGGCG
CGAGGGCGATGAGTCGTGCGTAACGGCTGCTGTGCTTGCGTGTGTTTATT
TCGCCTCGTGGTCTTTTCTTCGGCTTCCCGACGTCCTGGCGGCGTCGAAA
TTTCCGTCGATGTTTCCATCTGATTCTTGCCATTCTGGCGGCGACGTGGT
GCTGGTCAGCTTCCCTACCTCCTCGAACCCCCCCTGCCCCCGCTTTACAC
TCCCCGTAGATCGACACTAAGCTACAGGCCCTACTGACGGAGCACGGCCT
GGAGTGCGCGCCTCCGCTCACTACGGCGCGCCTGCTGGACAAGCTGGTGA
GTGGCAGTCCGCTTCTCTGCGGATGGAAATGAAGAGAGATCGGGGAGAGG
GATTAGAAAAAGCCATCAGGCGCAAATCGACATGAGTTCTGGGAATGGGG
GGAAGGGGGCACTGACAGAGGTATGCACTGAGAGAGAAGAGAGTAAGCGT
CACGAGACAGAGGGGTTCAGCCACACGCAAAAGATGTATTTGAATCAGTA
CGCCTGCGTGCTCGCGGGCACCTATCGTCGAAATTGTTGTTTTTGGAGCG
TTAGACCCTTTACCCCCCGCGATCTTCCACTCGGTACGTAAAACATGTCC
TCGGACAGCTCAGGCCCAAACAAACACACACTCCGCGTGTCTCTTAACAT
TCGGCTGATTGCGTGACCTCTCGACAAAGGTGGGCGACTTCTTGGAGGAC
AAGTGCGTGAACCCCACCTTCATAACGGACCACCCGGAGATCATGTCTCC
CCTAGCCAAGTACCACCGCTCGAGGCCCGGCCTCACCGAGCGTTTTGAGC
TGTTCGTTTGCGGCCGAGAGGTAAGACAGGGCATGCTGCTGCTGCGCCGC
AAGAAATGTCCGTACTCCCAGTGCCGCCTCCCGTCGCTCCATACCATCTT
TTTGTGCATTGACTGTTCTACCGCTGGGACGTGCAAGTGCGCTCAGCAGG
CGCATTTGCTTTCGCCGCGCTTGCAGTCTCGGTTGCGGCGGGAAACGGGC
GGTTGTCAAATCGGGGCACTGCGAGTGAGCTCATGGTGTGATTCCCCCCG
CTCTTAAACCCACTAGAGGACAAGAGGGGGGTAGAACGACGGGCCAACTT
GTTATGCACCTTGTTACGGTTTGGATGCGCTTTGGCCAACGACCTACCAC
GCCCATAGCCGCTACCGTCGCCGCCACCGTTGCCATCCCCTCCTCCTTTC
CTCTCGGTCCGTCTCCCGATCGCCGCAGCTCTGCAACGCGTACACGGAGC
TGAACAACCCAGTTGTGCAGCGGCAGCGCTTCCTGGACCAGTCCAAGGCC
TCCGTGGCCGGCGACGACGAGGCTCAGGTGCACGACGAGGAGTTCTGCAC
GGCGATGGAGTACGGCTTACCTCCGACCGCCGGCTGGGGCGTGGGCGTTG
ACCGCCTCACCATGTTCCTCTCGGACAAGGTGACTTGCTGCTGCTGTTTT
TGCCGCCGCTACTGCTGCTGCTGCCGCTGCTGCTACTGTCTTTGGTTTTT
GTTGTTTGTTTTCGTCCTTGCGTCTGTCATGGTCAAACGCTGCGGAGGCT
GCAAGTCGTCGAAAATCGTGGCTGTCGAAGCCGGACCCGTGGAGAGGAGA
ACAGAAGTTCACGAACGGAGTTCGAAGATTCGACGGCAGTCTCGGTAACT
TGCTGCGGAGCGAATGCCCTCTCCGCCCGCTCCCTCTTCATCTACCCTGC
TGCCGTCACCTCTTCTCCCTGTCGTGACCTCTCTGGTAACCCCAAAATAA
AACCGCCGCGCCCGGTGCCTGCCCCTTGACGGAAACGACCCCGCCCATGC
AGAACAACATCAAGGAGGTCCTTCTGTTCCCGGCCATGAAGCCAGAAGAG
ACGGGGGCCCCGCAGTCGACGTCACGGGGCCTAGAAATGGCGCCACCATT
CTCCGCCTCCCCCCCCGCTGCCGCCTCGGTAGCGTCCTACCCTGCGGTGT
TCGCGAACGGATCGAGCCTGCTGGATGGCGTTGACCTGGCGTCGATGGCC
GGGATTCAGAAGCTCGAGGTATGTGAGGCGCAACATTAGGACATCAAAGC
AGAGCAGAGCAGTGCAGTGCAGTGCGTCCCCGCCACCTGATTTTGTACCG
GCTTTCGTCGTCAGTGTTGACCACAACATGTTTAGTTGCGCGTGTGAAAT
GTTGCTTTTATTTTGTTCCCTTTGCACAGATGTGAAAAGCCGCGTAGCGC
AGCTCCAACTCAGGAACGTCGCTCGGTGTTTGCGAAACGTGAACACAAAG
CCTGCGGGGTTGCTGCCTTTTCAGCGGGTCGAATCCTCATCCCAACTACG
GAATCGCCGTGGTTCGTTCCTCTTTTCGGTGTTCGAGCCTTTGGGCTCAC
CCCCCTTAGCACAATCTCTGCCATTCGCTCTCGCTTCTTGAGCCCTTCGC
CATGTGTACGTGCGTTCGAAAAACTGTCGGTCGCCGTGATTTTGCTTGTG
TTCACGTAGGGACTGCTGAAGGGAAAGTCTTTCCTCGCGGGACCCCGCCC
GGGCGCGGAGGACGCGTGCGTGCACGCGGCGGCCTCCTCCCTGCCCGCCG
CGGTGCTCGAGGCCGCCCCGGCCGTGAAGGGCTGGCTCCACACGGTCGGC
TTCTTTTCCCCCTCCATGCGAGCGAGCTGGTGCGGCGTCGGTGGTGCTGC
GGCCCCGGCTGGTGCGAGTGCTAGGGATGGGAAGAAGGCGGAGGCGCCGG
CTGCTCCGGTAGCGGCCGCCAGGAGCGTCGCCCCCGCCCCTCCCGCCGCC
GCTGCCGTCGATGAGGATGATGACGTTGACAACTTGTTTGGAGACGAGGA
GGAGGAGGAGGAGGAGGGGCCGGCGAGCGGTGCCGGGGAGAGCCGGAGGG
AGCAAATGGCGGCGGCCAAGGCTGCCAAGGACGCCAACAAGAAGGTCGAC
AGGTGAGCCGCTGATGCTGCCGCTGGTGCTGCTGCTGCTGCTGCTGATGC
AGCCGCCCATCAGTTCGGCTGTTTGCTTTCCTTACATCCCTCAAAGGTTG
GGAGCGGTCCGCAGGGACGGGTAGCTTCGTCTCACGGTGTCTCATGGAAA
GTCGAAAGTTGCTCACACCAGCAGGGAAACAAGCATGCCACTTGTTCATC
GAAGGATGTTTCGGAATTTGCGAACGCCGAAAGTAGTCGTGTGTTCTCCA
GCGCTTTGAAATGCAGGCCAATCTGTGCCGTGAAAGTTGCACCCACGGTG
GTGATTTTGCTTGGGATGTTGCGGGGTTCTGCCAGGTGGGAACGTCCCAA
GAAGCCGACACCAGGTTTCGCTGAAGACTAGTTCAGGTTGAGGACCCCCC
TCTTCTCTCACATGCACACACACAAACGGATTCGCCAGGCTTCAGCAGCA
TACTCTAGTTTTTCCTCCAAACAAATATCGGGAAACCCAGGTCCCAGATC
GTATTCGAGGTGAAGCCGTGGGAGGCCGAAGCTGACCTCAAGGGTTTGTT
CGAGAAGATCACGCAGACGGAGATCGACGGCCTCGTGTGGGGAGAGGCCC
ACAAGCTGGTGCCAGTGGCCTTCGGCGTGAAGAAGCTGGTCTTGTCGTGT
GTGGTTGTTGACTCCAAGGTGAGGGGGCTCTGGGGTTTATCGCCGGCGGG
GGGTAGGGGCGGGGACCGGCTTCTGTTTTTCTTCGCTCGCAGCCTGTGTT
GTGGGGCTTGGCACAAGGACATACTCCTTCGACGTGAGTACAAGTATGGC
ACGCGTTTTCTTGTTCGGTGGTACTATCTTGCTGGTTCCATTTTTGTCAC
CCTACAAATCGGCGGGGTCTGTTTTGGAGATCGACGCCGCCACACTGTGT
ACGCCACGCTTCTCGTCATCGCCCCTCGCTACTGGGACACAGGACACGGG
AGGTCGAGCCTTCCGTTCCAAAACACTGTATTTTGTACTGTAATACGAGG
AAAACGCGTCGGACTTGTGAAGGGCTGGCGTCAAAACGTTTCTGCCGCCG
AACATGTTTCTCGAAAAACGAAACAGCAAGCACGACGTCATCAATTCTTC
CTCCCCCGTCGGCTTGAACGTTTGTTTATGTTGTATTCCCCATCGGCATC
TTAATGTCTTGCAACGTGCACGATACTTTTCTTCGTCTGTCGCGCCGCGA
ACGGCTTCTTCTCATCTCGTGCCATAACACAGGTCGGCGTTGAAGACATC
ACGGACGTGATCGAGTCTTTCGGGGAAGAGGTGCGCCTCAAGTGTTGCAA
TATGTCGATTGAAGTTCATTTAGCATCGATGTAGAAAACAACGCTGGACA
TAAAGCACCATCAGCAGGCAGGTCCATGTGTATGCTGTGGTTGTTGTTAT
CAGATACCAAATTGCAGAGGCCACAGATGGCGATGATCACATACGAGTAA
ACCTTCCCTGACTCCCGCTTGCCCCCCCCCCCCGAACCCCCTCCGGCGTC
TTGATTCTGCTCTCCTATCGACTCCCGCAGGTTCAGAGCGTAGATATGAC
GACGATGAACCGATTGTAACGCTCCGCGTAGGAAAGGTCGCATCGGCTGC
AGGAGTAGCAACTGGCGTCCACTACCGATTTTGTTTGGCTGCCACTTGTA
CGAGAGAATTGACGAAGAGCAACGGGGGCTTGGACGCTATAACCACGGCG
GCGCGATGGCGATACGGCGAGCAAGTCAGCAAAGCAAAGGTGCTGATCTT
TGTGGCCCTAAGCCTTAGGAGAGTGTTGCACTTACTCACGACTTCGTGTA
ATTTGACTGGCTGTGGAGTAACCTCGGTGCGAGAGGGCACGTACGCTCAC
GTGCTCTCGTTGGGGGAAGGGGAGTTCGTGGCGGTCTTGATTTTGTGTTA
GCACTCTATGTACGGTGTAGGTGCCCCTGTTTTTGTTTCGCTATCTTTTG
AGTTGAGACTGACGACGGTAGAGATAGATGTTGCTGGTGCGGCCGTGTGC
CGTTGTGTAGGGGACGACACTAACCAGCGGAGGAAACAAGAAAATTCGTT
TGGTTCGAAGGTCCTTTCGGCCGAGTCGCGCGCTCGACTGGAAGGCTGTC
GGAGGCCCCTGAATGCTTGCCTTCCTGTGGTTTGTTCGCAGCTGGGTGGT
TATTGGCCTCGTGAAAGAATTGCTTGCCGTCGACACGATAGCCACGACCC
AGATAACAACTCGTAGTAAGGAAGATACGTAATATCTTATCGCCGCTGAG
GAAATCCGGAAGTATGACGAGCCTTCCACAAATGGGCCACCGAGCAACGC
TAGATACCACATTCCAGTGTCATTTTGAAGCCTACATGCTACTGTGAAGT
GTCTTTACGACCGTTTTGCCGTTTCCCACTGTTTTGTTGTTTTTTGGGTA
GGAGGCGGAACGCGTCTATTTCTCAGTCTATCGTTGCGGACATGTAGCCG
CGCCACCTATCGCCGACGTGCGTCGAACAAGACAACAACACATACGGGGC
ACGCGAGTGCAGAGCGGGATGCTTGATCCTCAAGGTGGTGTACTCAACAA
CCGTGGTAAAACACATAAATGGCTG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig14:2277856..2288930+

>mRNA_P-fluviatile_contig14.2264.1 ID=mRNA_P-fluviatile_contig14.2264.1|Name=mRNA_P-fluviatile_contig14.2264.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4260bp|location=Sequence derived from alignment at P-fluviatile_contig14:2277856..2288930+ (Porterinema fluviatile SAG_2381)
ATGGCCTCGCTCGGCGACTACGAGGGAGGAGAGGAGGCGTTCTGGAAGAT
GGCCTCGCTCGGCGACTACGAGGGAGGAGAGGAGGCGTTCTGGAAGACGA
ACGGGCTGCTGCGAAGAGGCGACCTGATCGGAGTCACGGGGTACCCCGGC
AAGTCCAAGAAGGGGGAGCTGTCCGTGTTCCCCACGACCATCGTGCTCTT
GGCGCCGTGTCTCCACATGCTCCCCAACACAAGAGGAGGGCTCAAGAATC
AGGAGACGAACGGGCTGCTGCGAAGAGGCGACCTGATCGGAGTCACGGGG
TACCCCGGCAAGTCCAAGAAGGGGGAGCTGTCCGTGTTCCCCACGACCAT
CGTGCTCTTGGCGCCGTGTCTCCACATGCTCCCCAACACAAGAGGAGGGC
TCAAGAATCAGGAGACGCGCTATCGGCAGCGGTACCTGGACCTCATGACT
AACGATGAGACAAGACGGGTTTTCCAGACGCGCTATCGGCAGCGGTACCT
GGACCTCATGACTAACGATGAGACAAGACGGGTTTTCCAGGTTCGCTCCA
AGGTGGTGAACTACATCCGCTCCTTTTTGGACGAGCGAGGCTTCCTAGAG
GTTCGCTCCAAGGTGGTGAACTACATCCGCTCCTTTTTGGACGAGCGAGG
CTTCCTAGAGGTTGAAACGCCCATGATGAACATGGTGGCGGGAGGTGCCA
CGGCCAAACCGTTCGTGACGCACCACAATGACCTCGATCTGGACCTCTTC
ATGCGCGTGGCGCCCGAGCTGTACCTCAAGATGCTGGTCATCGGGGGGCT
TGACCGTGTGTACGAGATCGGTCGGCAGTTCCGCAACGAGGGGATCGACC
TCACGCATAACCCGGAGTTCACCACTTGCGAGTTTTACCAGGTTGAAACG
CCCATGATGAACATGGTGGCGGGAGGTGCCACGGCCAAACCGTTCGTGAC
GCACCACAATGACCTCGATCTGGACCTCTTCATGCGCGTGGCGCCCGAGC
TGTACCTCAAGATGCTGGTCATCGGGGGGCTTGACCGTGTGTACGAGATC
GGTCGGCAGTTCCGCAACGAGGGGATCGACCTCACGCATAACCCGGAGTT
CACCACTTGCGAGTTTTACCAGGCGTACGCGGACTACCAGGATCTGATGG
CGATGACAGAGGAGATGATCTCCGGCATGGTGAAGAAGATCTGCGGCTCC
TTCAAGATCAAGTACCAGCTCAACCCTGGGGAGGAGCCGCTGGAGGTGGA
CTTCACGCCGCCGTTCCGACGTGTGAGCATGATCGACGGCCTGGAGGAAG
TGCTGAAGGTCAAGCTGCCCGCGCTCGATGACCCGGAGGCGTACGCGGAC
TACCAGGATCTGATGGCGATGACAGAGGAGATGATCTCCGGCATGGTGAA
GAAGATCTGCGGCTCCTTCAAGATCAAGTACCAGCTCAACCCTGGGGAGG
AGCCGCTGGAGGTGGACTTCACGCCGCCGTTCCGACGTGTGAGCATGATC
GACGGCCTGGAGGAAGTGCTGAAGGTCAAGCTGCCCGCGCTCGATGACCC
GGAGATCGACACTAAGCTACAGGCCCTACTGACGGAGCACGGCCTGGAGT
GCGCGCCTCCGCTCACTACGGCGCGCCTGCTGGACAAGCTGATCGACACT
AAGCTACAGGCCCTACTGACGGAGCACGGCCTGGAGTGCGCGCCTCCGCT
CACTACGGCGCGCCTGCTGGACAAGCTGGTGGGCGACTTCTTGGAGGACA
AGTGCGTGAACCCCACCTTCATAACGGACCACCCGGAGATCATGTCTCCC
CTAGCCAAGTACCACCGCTCGAGGCCCGGCCTCACCGAGCGTTTTGAGCT
GTTCGTTTGCGGCCGAGAGGTGGGCGACTTCTTGGAGGACAAGTGCGTGA
ACCCCACCTTCATAACGGACCACCCGGAGATCATGTCTCCCCTAGCCAAG
TACCACCGCTCGAGGCCCGGCCTCACCGAGCGTTTTGAGCTGTTCGTTTG
CGGCCGAGAGCTCTGCAACGCGTACACGGAGCTGAACAACCCAGTTGTGC
AGCGGCAGCGCTTCCTGGACCAGTCCAAGGCCTCCGTGGCCGGCGACGAC
GAGGCTCAGGTGCACGACGAGGAGTTCTGCACGGCGATGGAGTACGGCTT
ACCTCCGACCGCCGGCTGGGGCGTGGGCGTTGACCGCCTCACCATGTTCC
TCTCGGACAAGCTCTGCAACGCGTACACGGAGCTGAACAACCCAGTTGTG
CAGCGGCAGCGCTTCCTGGACCAGTCCAAGGCCTCCGTGGCCGGCGACGA
CGAGGCTCAGGTGCACGACGAGGAGTTCTGCACGGCGATGGAGTACGGCT
TACCTCCGACCGCCGGCTGGGGCGTGGGCGTTGACCGCCTCACCATGTTC
CTCTCGGACAAGAACAACATCAAGGAGGTCCTTCTGTTCCCGGCCATGAA
GCCAGAAGAGACGGGGGCCCCGCAGTCGACGTCACGGGGCCTAGAAATGG
CGCCACCATTCTCCGCCTCCCCCCCCGCTGCCGCCTCGGTAGCGTCCTAC
CCTGCGGTGTTCGCGAACGGATCGAGCCTGCTGGATGGCGTTGACCTGGC
GTCGATGGCCGGGATTCAGAAGCTCGAGAACAACATCAAGGAGGTCCTTC
TGTTCCCGGCCATGAAGCCAGAAGAGACGGGGGCCCCGCAGTCGACGTCA
CGGGGCCTAGAAATGGCGCCACCATTCTCCGCCTCCCCCCCCGCTGCCGC
CTCGGTAGCGTCCTACCCTGCGGTGTTCGCGAACGGATCGAGCCTGCTGG
ATGGCGTTGACCTGGCGTCGATGGCCGGGATTCAGAAGCTCGAGGGACTG
CTGAAGGGAAAGTCTTTCCTCGCGGGACCCCGCCCGGGCGCGGAGGACGC
GTGCGTGCACGCGGCGGCCTCCTCCCTGCCCGCCGCGGTGCTCGAGGCCG
CCCCGGCCGTGAAGGGCTGGCTCCACACGGTCGGCTTCTTTTCCCCCTCC
ATGCGAGCGAGCTGGTGCGGCGTCGGTGGTGCTGCGGCCCCGGCTGGTGC
GAGTGCTAGGGATGGGAAGAAGGCGGAGGCGCCGGCTGCTCCGGTAGCGG
CCGCCAGGAGCGTCGCCCCCGCCCCTCCCGCCGCCGCTGCCGTCGATGAG
GATGATGACGTTGACAACTTGTTTGGAGACGAGGAGGAGGAGGAGGAGGA
GGGGCCGGCGAGCGGTGCCGGGGAGAGCCGGAGGGAGCAAATGGCGGCGG
CCAAGGCTGCCAAGGACGCCAACAAGAAGGTCGACAGGGACTGCTGAAGG
GAAAGTCTTTCCTCGCGGGACCCCGCCCGGGCGCGGAGGACGCGTGCGTG
CACGCGGCGGCCTCCTCCCTGCCCGCCGCGGTGCTCGAGGCCGCCCCGGC
CGTGAAGGGCTGGCTCCACACGGTCGGCTTCTTTTCCCCCTCCATGCGAG
CGAGCTGGTGCGGCGTCGGTGGTGCTGCGGCCCCGGCTGGTGCGAGTGCT
AGGGATGGGAAGAAGGCGGAGGCGCCGGCTGCTCCGGTAGCGGCCGCCAG
GAGCGTCGCCCCCGCCCCTCCCGCCGCCGCTGCCGTCGATGAGGATGATG
ACGTTGACAACTTGTTTGGAGACGAGGAGGAGGAGGAGGAGGAGGGGCCG
GCGAGCGGTGCCGGGGAGAGCCGGAGGGAGCAAATGGCGGCGGCCAAGGC
TGCCAAGGACGCCAACAAGAAGGTCGACAGGTCCCAGATCGTATTCGAGG
TGAAGCCGTGGGAGGCCGAAGCTGACCTCAAGGGTTTGTTCGAGAAGATC
ACGCAGACGGAGATCGACGGCCTCGTGTGGGGAGAGGCCCACAAGCTGGT
GCCAGTGGCCTTCGGCGTGAAGAAGCTGGTCTTGTCGTGTGTGGTTGTTG
ACTCCAAGGTCCCAGATCGTATTCGAGGTGAAGCCGTGGGAGGCCGAAGC
TGACCTCAAGGGTTTGTTCGAGAAGATCACGCAGACGGAGATCGACGGCC
TCGTGTGGGGAGAGGCCCACAAGCTGGTGCCAGTGGCCTTCGGCGTGAAG
AAGCTGGTCTTGTCGTGTGTGGTTGTTGACTCCAAGGTCGGCGTTGAAGA
CATCACGGACGTGATCGAGTCTTTCGGGGAAGAGGTCGGCGTTGAAGACA
TCACGGACGTGATCGAGTCTTTCGGGGAAGAGGTTCAGAGCGTAGATATG
ACGACGATGAACCGATTGTAAGTTCAGAGCGTAGATATGACGACGATGAA
CCGATTGTAA
back to top