mRNA_P-fluviatile_contig14.2233.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: A0A6H5LB75_9PHAE (Ribonuclease P n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB75_9PHAE) HSP 1 Score: 709 bits (1830), Expect = 8.470e-241 Identity = 431/761 (56.64%), Postives = 502/761 (65.97%), Query Frame = 1
Query: 322 TPTVKIVICGKEISVSNPTVRKKRKLPVEAVVTMAYKGQLALACKANNMISALKIYREMKSKGVKQDLSTYLMVLALCGGSPGDRDELDPGNGSTCSRVAFS-------AEAKVEGTSAKDDTHAAAETALQIFSDASNGGTVTLPESAYTSVIRACCLDGRVDRAREVLEDLKRADVIPRVRTYSPLLEAYAGLGGRLQDCMVIWREAVSPANG-RQGVTMTEREYLHLIAACTRARDEKCFLEVMAEYMDDVLQPRSRHSWDVLKAWFAVGPNVIGNGVVENGSEVASGA----KPE---VESPEEGEAIDAACPAGETSKHPSGGSGDGEGGHEPQRGDQEIVAAVASAAPEAEEALATPAALALXXXXXXAAATGTETSAPP-AKTAGRTGTPTLGDGGGEXXXXXXXXXXXXXXXXXXXXXXXXADSAVDPAAANGAADVQDEYTRESTPSSPSAIARSSFPRTADANSSTTAPAAERPRLPRSSSPAPVGAQ---EGGGGDDNHVPGAGEQASSTRGCGNESDDAMG-----LDDSKVSPSGGRRGDAGGDDVVSASGS--WRVAECKVGEDGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQV 2526
T KI ICGKEI++ + RKKRK P+E ++ +AYK +L L CKANNMISAL+I++EMKSKG+KQDLST++MVL+LCGGSPGDRDELDPGNGST A A+ +VEG SA+D+T AAAE ALQIFSDAS GGTV+LPESAYT+VIRACC DGR DRARE LE LK+A + PRVRTY+PLLEAY+ L GRL+DCM +WREAVSP G +QG+TMTEREYLHLIAACTRARDEKCFLEVM EYMDDVLQPRSRHSWDVLK+WF VGPNVIGNG V++ EVA+ KPE +E+P GE D +GG +G+GG Q + + A+AAP A A G SAP +K T P+ G DSA+ PA+++ + S + A A S PR++ VG +G GGDD A E A G D+A+G + V + R AGG+ + G+ W V EC V +DGTCENCGEV+RSIELS DDEQRLLKQIE LVCTNEQRT QWEG+ GWLERRGK RYNVIIDGAN+GYYK A S+GELADLRQVDWAVKK+++EGKKPLVVLHSRHL +KRLS+EA+ IYKRWKEA+ IQSCAPKNNDDWYWLYAAVY GG VLVLTNDEMRDHHFSMLSHRSFQRWKERHQ
Sbjct: 106 TTAGKITICGKEITLQHTGGRKKRKHPMETLILLAYKEELTLKCKANNMISALEIHQEMKSKGIKQDLSTHMMVLSLCGGSPGDRDELDPGNGSTGGHAASVERTAAAVAKGRVEGASAQDNTFAAAEAALQIFSDASKGGTVSLPESAYTAVIRACCRDGRADRAREALEALKQAGLKPRVRTYTPLLEAYSKLDGRLEDCMALWREAVSPPGGLQQGITMTEREYLHLIAACTRARDEKCFLEVMTEYMDDVLQPRSRHSWDVLKSWFKVGPNVIGNGYVKH-REVAAATTARTKPEEGEIENPRSGELPD------------NGGISEGDGGESGQ--ESTATSGAAAAAPT--------------LAGDAAGAPGVGDSAPSLSKAVVATEPPSARPDGSHG-----------------------TDSALAPASSSXXXXXXXQADGSSGDDATGAAATS----------------------PRAAGAYAVGRSFQADGCGGDD-----AMEDAPQADG-----DEAVGGPTPVAGEDAVEEASPRADAAGGEKEPPSGGTSGWIVTECYVRKDGTCENCGEVMRSIELSEDDEQRLLKQIEELVCTNEQRTHQWEGFRGWLERRGKQRYNVIIDGANVGYYK-ACLSEGELADLRQVDWAVKKFQDEGKKPLVVLHSRHLVEKRLSDEAKEIYKRWKEADMIQSCAPKNNDDWYWLYAAVYTGGSVLVLTNDEMRDHHFSMLSHRSFQRWKERHQA 781
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: D7FNK6_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK6_ECTSI) HSP 1 Score: 384 bits (985), Expect = 5.480e-119 Identity = 195/270 (72.22%), Postives = 225/270 (83.33%), Query Frame = 1
Query: 322 TPTVKIVICGKEISVSNPTVRKKRKLPVEAVVTMAYKGQLALACKANNMISALKIYREMKSKGVKQDLSTYLMVLALCGGSPGDRDELDPGNGSTCSRVAFS-------AEAKVEGTSAKDDTHAAAETALQIFSDASNGGTVTLPESAYTSVIRACCLDGRVDRAREVLEDLKRADVIPRVRTYSPLLEAYAGLGGRLQDCMVIWREAVSPANG-RQGVTMTEREYLHLIAACTRARDEKCFLEVMAEYMDDVLQPRSRHSWDVLKAWF 1107
T KI ICGKEI++ + RKKRK P+E ++ +AYK +L L CKANNM+SAL+I++EMKSKG+KQDLST++MVL+LCGGSPGDRDELDPGNG T A A+ +VEG SA+D+T AAAE ALQIFSDAS GGTV+LPESAYT+VIRACC DGR DRARE LE LK+AD+ PRVRTY+PLLEAY+ L GRL+DCM +WREAVSP G +QG+TMTEREYLHLIAACTRARDEKCFLEVM EYMDDVLQPRSRHSWDVLKAWF
Sbjct: 105 TTAGKITICGKEITLQHTGGRKKRKHPMETLILLAYKDELTLKCKANNMVSALEIHQEMKSKGIKQDLSTHMMVLSLCGGSPGDRDELDPGNGLTGGHAASVERTAAAVAKGRVEGASAQDNTFAAAEAALQIFSDASKGGTVSLPESAYTAVIRACCRDGRADRAREALEALKQADLKPRVRTYTPLLEAYSKLDGRLEDCMTLWREAVSPPAGLQQGITMTEREYLHLIAACTRARDEKCFLEVMTEYMDDVLQPRSRHSWDVLKAWF 374
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: A0A1V9YXD0_9STRA (Ribonuclease P n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXD0_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.440e-45 Identity = 91/200 (45.50%), Postives = 129/200 (64.50%), Query Frame = 1
Query: 1945 WRVAE---CKVG---EDGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQV 2526
W ++E CK G EDG C G L SIELS++ E LLK++E LVCT+++RT+QW + W++ G Y+V++D AN+GY+ Q +G + +Q+ ++ Y+ GKK L+VLH R +DK + E R++ W++ + +C P NNDDWYWLYAAV G+ LV++NDEMRDHHF M+S F RWKERH V
Sbjct: 223 WFMSEGFTCKEGTVNEDGICSVTGAKLLSIELSKEKEDILLKKVEGLVCTSDERTEQWNEFKSWIDENGP--YDVLLDAANIGYFNQNY--EGGGFNYKQIQRVLQAYQRRGKKVLIVLHKRRTSDKEVPEHLRSMVAGWRDKNEMYNCRPGNNDDWYWLYAAVNFSGRTLVVSNDEMRDHHFQMISGVDFHRWKERHLV 418
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: H3H2L4_PHYRM (Ribonuclease P n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2L4_PHYRM) HSP 1 Score: 180 bits (456), Expect = 5.880e-45 Identity = 90/194 (46.39%), Postives = 127/194 (65.46%), Query Frame = 1
Query: 1945 WRVAECKVGEDGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQV 2526
W++ E V E+G C G+ L+S+EL + E LL ++E LV T+E+RT QW+ + WL G ++VIID AN+GY Q DG + Q++ V+ YE G KPL+VLH R D+++ E R +W+ + + +C P NNDDWYWLYAAV +GG+ L+++NDEMRDHHF M+ +R+F RWKERHQV
Sbjct: 251 WKITEGTVSEEGVCSVTGDQLQSLELEAELEAELLAKVEKLVRTDEKRTAQWDAFKQWLGEFGP--FDVIIDAANVGYCNQNF--DGGGFNYAQIELMVQHYEARGNKPLLVLHERRTWDEQVPAEHRAQVAQWRASHKMFNCQPGNNDDWYWLYAAVKLGGRTLMISNDEMRDHHFQMIHNRAFGRWKERHQV 440
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: A0A1V9ZIW2_9STRA (Ribonuclease P n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIW2_9STRA) HSP 1 Score: 179 bits (454), Expect = 7.820e-45 Identity = 86/197 (43.65%), Postives = 124/197 (62.94%), Query Frame = 1
Query: 1936 SGSWRVAECKVGEDGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQV 2526
S W V V E G C G L S+ELS + L+ ++E LVCT+++RT+QW + WL+ G ++VI+D AN+GY+ Q +G RQ+ + Y+ GKK L+VLH R +D+++ E+ R + + W++ + +C P NNDDWYWLYAAV +GG+ LV++NDEMRDHHF M+ + F RWKERH V
Sbjct: 231 SDGWTVETGTVDESGVCSVTGSTLESVELSEAKQAALMTKVEGLVCTSDERTEQWAAFKEWLDTNGP--FDVILDAANIGYFSQNY--EGGGFSYRQIQRVLSAYQARGKKVLIVLHKRRTSDRQVPEDLRPLVQAWRDDGVMYNCLPGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFQMIHNVDFHRWKERHLV 423
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: K3WUG8_GLOUD (Ribonuclease P n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUG8_GLOUD) HSP 1 Score: 178 bits (452), Expect = 1.830e-44 Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 1
Query: 1945 WRVAECKVGEDGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQV 2526
W + V + G C G+ L+SIEL E +LL++IE LV T+E+RT QWE + WL G ++V+ID AN+GY+ Q DG D +Q++ + YE++ K+ L+VLH R D+++ E R + +W E + +C P NNDDWYWLYAAV +GG+ L +TNDEMRDHHF M+ R+F RWKERHQ
Sbjct: 247 WTCSVGSVDDKGVCSVTGDQLQSIELPPALETKLLEKIESLVTTDERRTAQWEAFKTWLSEHGP--FDVVIDAANVGYFNQNY--DGGGFDYKQIETLLTHYEQQDKRVLIVLHKRRTMDEQVPAEHRAMVAQWAERRIMFNCLPGNNDDWYWLYAAVRLGGRTLAVTNDEMRDHHFQMIHDRAFARWKERHQT 436
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: W4GZN2_9STRA (Ribonuclease P n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZN2_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.500e-44 Identity = 98/246 (39.84%), Postives = 141/246 (57.32%), Query Frame = 1
Query: 1942 SWRVAECKVGEDGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQVI------------PLISSSGSFQGCCLLWEHSHRALFDWFGARFRRRPSAV 2643
+W+ +V + G C G L+S+ELSR+ E LL ++E LVCT+++R +QW + WL+ G ++VIID AN+GY+ Q F G + Q+ +K Y+++G+KPL+VLH R D ++ E R + ++WK + +C NNDDWYWLYAAV + G+ LV++NDEMRDHHF M+ ++ F RWKERH V P + S S W A DW F RR S+V
Sbjct: 241 AWQCNIGEVNDQGICSVTGSTLQSVELSREKEDALLAKVENLVCTSDERIEQWTAFKTWLDEHGP--FDVIIDAANVGYFNQN-FEGGGFS-YPQIQTVLKAYQDKGQKPLIVLHKRRTKDHQVPEPHRAMVQQWKHDNVMFNCQYGNNDDWYWLYAAVKLSGRTLVVSNDEMRDHHFQMIHNQDFHRWKERHLVHYEVRGHKLDLHEPSVYSMRSQHLESGSWHFPSTASSDWLV--FHRRRSSV 480
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: A0A7S2SKI7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKI7_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.920e-44 Identity = 82/174 (47.13%), Postives = 119/174 (68.39%), Query Frame = 1
Query: 2005 LRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQV 2526
LRSI+L ++ QR+L+Q+ L T + +W G+ GWLER+G+ ++V++DGAN+GY+KQ + + Q+D V+ ++ +GK+ L+ LH RHL + L + KRWK +T+ + +NDDW+WLYAAV++ V V+TNDEMRDHHF MLSHRSFQRWKERHQ+
Sbjct: 82 LRSIDLGGEERQRMLEQVSELALTGKDGAAKWAGFTGWLERKGRTAFDVLVDGANVGYFKQNYPGAPKHVNYEQIDCVVRHFQAQGKRVLLFLHQRHLFPQNLPASCVDLTKRWKSEKTLFTTPVGSNDDWFWLYAAVWLEN-VQVVTNDEMRDHHFRMLSHRSFQRWKERHQI 254
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: A0A6A3RJW5_9STRA (Ribonuclease P n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RJW5_9STRA) HSP 1 Score: 177 bits (449), Expect = 7.510e-44 Identity = 90/194 (46.39%), Postives = 128/194 (65.98%), Query Frame = 1
Query: 1945 WRVAECKVGEDGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQV 2526
W++ E V ++G C G L+S+ELS + LL +IE LV T+E+R QW+ + WLE G ++V+ID AN+GY Q F G + +Q++ V+ YE +GKK LVVLH R D+++ E R +W+ + T+ +C P NNDDWYWLYA V +GG+ L+++NDEMRDHHF M+ +R+F RWKERHQV
Sbjct: 256 WKITEGTVSKEGVCSVTGNQLQSLELSPELSAELLAKIEKLVRTDEKRMAQWDEFKQWLEEFGP--FDVVIDAANVGYCNQN-FEGGGF-NYKQIELMVQHYEAKGKKVLVVLHQRRTTDEQVPPEHRAQLVQWRASRTMFNCQPGNNDDWYWLYAVVKLGGRTLMVSNDEMRDHHFQMIHNRAFGRWKERHQV 445
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Match: A0A024UCX6_9STRA (Ribonuclease P n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCX6_9STRA) HSP 1 Score: 176 bits (447), Expect = 8.350e-44 Identity = 97/241 (40.25%), Postives = 139/241 (57.68%), Query Frame = 1
Query: 1960 CKVGE---DGTCENCGEVLRSIELSRDDEQRLLKQIEVLVCTNEQRTKQWEGYCGWLERRGKGRYNVIIDGANLGYYKQAAFSDGELADLRQVDWAVKKYEEEGKKPLVVLHSRHLADKRLSEEARTIYKRWKEAETIQSCAPKNNDDWYWLYAAVYMGGKVLVLTNDEMRDHHFSMLSHRSFQRWKERHQVI------------PLISSSGSFQGCCLLWEHSHRALFDWFGARFRRRPS 2637
C VGE G C G L+S+ELS + +Q LL ++E LVCT+++R QW + WL+ G ++VIID AN+GY+ Q F G + Q+ V+ Y+ +G PL+VLH R D ++ + R + ++WK+ +T+ +C NNDDWYWLYAAV +GG+ LV++NDEMRDHHF M+ ++ F RWKERH V P + S S Q W + DW RR+P+
Sbjct: 245 CNVGEVNKAGICSVTGSTLQSVELSAEKQQALLTKVENLVCTSDERVAQWAAFKAWLDEHGP--FDVIIDAANVGYFNQN-FEGGGF-NYGQIQTVVQAYQSKGLTPLIVLHKRRTKDNQVPAQHRAMVQQWKDEKTMFNCEYGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFQMIHNQDFHRWKERHLVHYEVRGHNVVLHEPSVYSKRS-QHLASSWHFPTTSSSDWLVFHRRRQPA 480 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2233.1 >prot_P-fluviatile_contig14.2233.1 ID=prot_P-fluviatile_contig14.2233.1|Name=mRNA_P-fluviatile_contig14.2233.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=977bp MSELKRKREDDAEGEEADTEAVGCGLPKASIMPSVAPAAEEIAAPAAPAPback to top mRNA from alignment at P-fluviatile_contig14:2000921..2009726- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2233.1 ID=mRNA_P-fluviatile_contig14.2233.1|Name=mRNA_P-fluviatile_contig14.2233.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8806bp|location=Sequence derived from alignment at P-fluviatile_contig14:2000921..2009726- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:2000921..2009726- >mRNA_P-fluviatile_contig14.2233.1 ID=mRNA_P-fluviatile_contig14.2233.1|Name=mRNA_P-fluviatile_contig14.2233.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5862bp|location=Sequence derived from alignment at P-fluviatile_contig14:2000921..2009726- (Porterinema fluviatile SAG_2381)back to top |