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Homology
BLAST of mRNA_P-fluviatile_contig14.2193.1 vs. uniprot
Match: D7FNM9_ECTSI (Eaf6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM9_ECTSI) HSP 1 Score: 238 bits (607), Expect = 7.050e-72 Identity = 130/163 (79.75%), Postives = 140/163 (85.89%), Query Frame = 1
Query: 1 MGVSSQPSSSPTPNADSLVVNSDEMRTLIQHRKELDESLAQMEAQIFHDEGAYIKETPCGNVIRGFDSFHDCKLNADQPKKSRLEVIEERIFSKSSFLFWQRSRERAAREEAKKREREQHQAMTANRAMW-----GGAG---ANGTAEGVGHVQPLGYGAYGS 465
M SSQPS DSLVVNSDEMR L+QHRKELDESLAQMEAQIFHDEG+YIKETPCGNVIRGF++FHD KLNA+QPKKSR+EVIEERIFSKSSFLFWQRSR+RAA+EEAKKREREQH AM ANR M+ GGAG ANG AEGVGHVQPLGYG+YGS
Sbjct: 1 MAASSQPSXXXXXXXDSLVVNSDEMRILMQHRKELDESLAQMEAQIFHDEGSYIKETPCGNVIRGFETFHDSKLNAEQPKKSRMEVIEERIFSKSSFLFWQRSRDRAAKEEAKKREREQHHAMLANRGMFMGGGSGGAGXXXANGAAEGVGHVQPLGYGSYGS 163
BLAST of mRNA_P-fluviatile_contig14.2193.1 vs. uniprot
Match: A0A6H5L366_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L366_9PHAE) HSP 1 Score: 235 bits (600), Expect = 3.570e-71 Identity = 127/162 (78.40%), Postives = 137/162 (84.57%), Query Frame = 1
Query: 1 MGVSSQPSSSPTPNADSLVVNSDEMRTLIQHRKELDESLAQMEAQIFHDEGAYIKETPCGNVIRGFDSFHDCKLNADQPKKSRLEVIEERIFSKSSFLFWQRSRERAAREEAKKREREQHQAMTANRAMWGGAG--------ANGTAEGVGHVQPLGYGAYG 462
M SSQPSSSP P ADSLVVNSDEMR L+QHRKELDESLAQ+EAQIFHDEG+YIKETPCGNVIRGF++FHD KLNA+QPKKSR+EVIEERIFSKSSFLFWQRSR+RAA+EEAKK ERE AM ANR M G ANG AEGVGHVQPLGYG+YG
Sbjct: 1 MAASSQPSSSPPPTADSLVVNSDEMRILMQHRKELDESLAQLEAQIFHDEGSYIKETPCGNVIRGFENFHDSKLNAEQPKKSRMEVIEERIFSKSSFLFWQRSRDRAAKEEAKKHEREXXHAMLANRGMLMGXXXXXXXXXXANGAAEGVGHVQPLGYGSYG 162
BLAST of mRNA_P-fluviatile_contig14.2193.1 vs. uniprot
Match: A0A0J9XCC6_GEOCN (Chromatin modification-related protein EAF6 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCC6_GEOCN) HSP 1 Score: 56.6 bits (135), Expect = 2.390e-6 Identity = 28/75 (37.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 73 MRTLIQHRKELDESLAQMEAQIFHDEGAYIKETPCGNVIRGFDSFHDCKLNADQPKKSRLEVIEERIFSKSSFLF 297
++ LI ++ +D+SL +E Q++ EGAY+++TP GNV+RGF+++ + Q KK ++R+FS SS +F
Sbjct: 28 LKELIAKKRAMDKSLNTLEEQLYKLEGAYLEDTPSGNVVRGFENY----VKGSQTKKRIGLSEQDRVFSMSSAVF 98
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Similar to Eaf6 NuA4 complex protein |
| Ec32 ortholog | Ec-01_004900.1 |
| Exons | 6 |
| Model size | 1534 |
| Cds size | 723 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815617.6735308-CDS-P-fluviatile_contig14:1666124..1666222 | 1622815617.6735308-CDS-P-fluviatile_contig14:1666124..1666222 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1666125..1666222 + |
| 1693562469.2564542-CDS-P-fluviatile_contig14:1666124..1666222 | 1693562469.2564542-CDS-P-fluviatile_contig14:1666124..1666222 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1666125..1666222 + |
| 1622815617.6879926-CDS-P-fluviatile_contig14:1667021..1667138 | 1622815617.6879926-CDS-P-fluviatile_contig14:1667021..1667138 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1667022..1667138 + |
| 1693562469.2674916-CDS-P-fluviatile_contig14:1667021..1667138 | 1693562469.2674916-CDS-P-fluviatile_contig14:1667021..1667138 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1667022..1667138 + |
| 1622815617.7006366-CDS-P-fluviatile_contig14:1667803..1667905 | 1622815617.7006366-CDS-P-fluviatile_contig14:1667803..1667905 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1667804..1667905 + |
| 1693562469.2780564-CDS-P-fluviatile_contig14:1667803..1667905 | 1693562469.2780564-CDS-P-fluviatile_contig14:1667803..1667905 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1667804..1667905 + |
| 1622815617.7128823-CDS-P-fluviatile_contig14:1668469..1668612 | 1622815617.7128823-CDS-P-fluviatile_contig14:1668469..1668612 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1668470..1668612 + |
| 1693562469.2860353-CDS-P-fluviatile_contig14:1668469..1668612 | 1693562469.2860353-CDS-P-fluviatile_contig14:1668469..1668612 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1668470..1668612 + |
| 1622815617.7254338-CDS-P-fluviatile_contig14:1668953..1669078 | 1622815617.7254338-CDS-P-fluviatile_contig14:1668953..1669078 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1668954..1669078 + |
| 1693562469.4187887-CDS-P-fluviatile_contig14:1668953..1669078 | 1693562469.4187887-CDS-P-fluviatile_contig14:1668953..1669078 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1668954..1669078 + |
| 1622815617.7367861-CDS-P-fluviatile_contig14:1669616..1669754 | 1622815617.7367861-CDS-P-fluviatile_contig14:1669616..1669754 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1669617..1669754 + |
| 1693562469.433883-CDS-P-fluviatile_contig14:1669616..1669754 | 1693562469.433883-CDS-P-fluviatile_contig14:1669616..1669754 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1669617..1669754 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815617.747632-UTR-P-fluviatile_contig14:1669754..1670565 | 1622815617.747632-UTR-P-fluviatile_contig14:1669754..1670565 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 1669755..1670565 + |
| 1693562469.443236-UTR-P-fluviatile_contig14:1669754..1670565 | 1693562469.443236-UTR-P-fluviatile_contig14:1669754..1670565 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 1669755..1670565 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2193.1 >prot_P-fluviatile_contig14.2193.1 ID=prot_P-fluviatile_contig14.2193.1|Name=mRNA_P-fluviatile_contig14.2193.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=241bp
MGVSSQPSSSPTPNADSLVVNSDEMRTLIQHRKELDESLAQMEAQIFHDE GAYIKETPCGNVIRGFDSFHDCKLNADQPKKSRLEVIEERIFSKSSFLFW QRSRERAAREEAKKREREQHQAMTANRAMWGGAGANGTAEGVGHVQPLGY GAYGSSAHGGAAAPSASHHGGSGGHKTHAHKKRHPDGQSHGHKKKKKKRT STGAGSGSYLGASSQGGGGDGSGGGGSAGSSATAGRYDTL* back to topmRNA from alignment at P-fluviatile_contig14:1666125..1670565+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig14.2193.1 ID=mRNA_P-fluviatile_contig14.2193.1|Name=mRNA_P-fluviatile_contig14.2193.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4441bp|location=Sequence derived from alignment at P-fluviatile_contig14:1666125..1670565+ (Porterinema fluviatile SAG_2381) ATGGGGGTGTCTTCCCAGCCTTCCTCGAGTCCTACTCCCAACGCCGACAG
CCTTGTGGTCAACTCGGACGAGATGCGTACCCTGATACAACACAGAAAGT
GAGTCGACTCGGACAAGTATAGGTACTGCAGTGGCTGCCAACGTGTAGGT
GTGGCGGTTGTGAAAATGCGGCGGAACCTCATCAACAAATATGGTGTCTG
AACAAGGTTGCGATCATCTCCGAATCCAAAAAAGTCTCGATTCGCATGTA
AGTGCAGCTCCCGCCGCATCGAGCAGATGACAAGCACACTAACAAATTTT
TGTGAAGGAGGAGGACGAGCAAAGCATCGTTCTTCGGCCGTCGGAACCAA
ACGCTCACCGCACTGCCATTTTCGGCACTAACTCGCGCGTCACGCCTGTG
GGTATTAGAAAGGAACGCGGGGAAAAATTTACCTCGTTACCCATTCTTGT
AGACACCCCAGCTAATGAAACACATGTGTGATGCAGAAGAAGAGTTTGCT
GGTGACGATTGCTTCCAGCGAAAAATAGATTTCATGGCCTTGCGCGATCC
TCGTTGTGTGTTCAGCGGTGGGGACCTCGCAAAGGTTCTTTGAGAGCATT
CACCAACAAACAGGGAAGATGAAGAAAACTGCCTTGCCAAAATGCGACGC
AGTAAGAAGGAGTTTGGAATCCCCACCATACCTTCTCCTTCCACAAACAG
CAGTGCCGTGAAAACTTCTTCAAGCGCACAGATCGGTAGAAATGAAATAT
AAGATGAAATGGTACTTTATCTTCATACGCTATTTAAGCACGTGTGCCAC
AAGCGTTTAGGCGTAGTTAGAGTATTGTGACGCACGAGTTGCACGTACGT
AAAACTAAACTTTTCACTTGGCATGAGCCTCATTCCGGATTTGACAGAGA
GCTAGACGAAAGCCTCGCGCAGATGGAGGCGCAGATTTTCCACGACGAGG
GCGCGTACATCAAGGAGACCCCGTGCGGGAACGTCATTCGTGGCTTCGAC
AGCTTTCACGACTGGTACGTGCGCATGGTAACCTCTCGGCTCAGCCAGCA
CGTGTTCATGTATGTTGTCATTTTCATTTTCCCGTGGTAGCGGCGTTCAT
CTTTTGTGCATAAGTGACTTTTCGCTGGGCCCATGAATCGACCGCAAGGA
GACCGATGACTGGCGTCTTGTTACATGAATTTGCGATTTCTTTTTTGCAA
CGAAGCATTTGGTTATCAAGCGCTATATGCTGTCCTTTCGATCTTTCGAA
GACAGTCAGGTTTTCCCGAACGAAATACGGTCACCTGGCAGCAGTCGCAG
CATGAGTGGGGAGAGGGAGAAAGAGCGAGAGGGGGAGCAAGTGAGAGATA
GATAGATAGATAAATATAGAGGGGGGAATCAAGCGTTTGGCTCTTTTTAT
CATACCCACTGGCAGAGTTTGGAGGCTGGCGGCTTCTATCCCACCCTTTG
CGATCCTTTCGCTGGAAAATCAAGGTGTTCCTAGTTTGATGTGAGGAGCG
GCTGCATGGGGTACGTGCACGACGTATCCAGACTGCACTTGTTGTCCCGG
CACCAAGGGCATGCACGCGTCTGTCGTGTAATGTCTCGTGTTTTTCTTGC
CGCTTGTTTTTGCGTTCTTGTCATCGCTGGCGCGCCCACTACTGCATCTG
CCCGTGGGCCGCCGTGAACAACCACACAGCAAGCTGAACGCCGACCAGCC
CAAGAAGTCCCGCTTGGAAGTCATCGAGGAGCGGATATTCAGCAAATCCT
CTTTCCTCTTCTGGCAGAGGTCGCGAGAACGGTGAGATGTTGATTCTGCC
GCTTCGGGGCGTATATGCGACACGCGGTGATATGGTGTTGACTCGAAGGA
GGAACCTCCATTTCTTCGGTGTCTCTCGTTTGTCCATAGCTGGCGCGAGA
GAATGGCTAGGGCGTGGTAGAGGTGTTGTGAAAGCATCGCACACGGTGGT
CGAATCGACTTTTTTAGTTCCTCGTGATGGTCTTTGTGCTCGTCTTTTCG
GTCGCAGTCGACAAGCAGGTCTTCGGCGCCGATCCATTTTCGGCCCGGGT
TTGTCTGAGGTGCGGGAACATGGCAATAGGAATTCCGACTTCACGTTTTG
CATCGTCCATGAAGGTCTTAGTAAGACTTCAATGTACCACAGCAGGGTGT
CGCCTCTCTGCGTTGTCGCCTTTCTCTTATCCTCGCCGGCAGCTTTTTGT
TCAGAGAATATGAAGGTTTGCCATTTTACCTTCATGCGCAGAGAGGTATG
TCCTCGAAACGGGTGAGTGTGAGCTTGATTCGAGACGACCCTCGATCACA
CGGTAAACGGCAGTGGTCGACGAAACTTGATGCCGCGTTCGCTAGGGCCG
CGAGAGAAGAAGCCAAAAAGCGGGAGCGCGAGCAGCACCAGGCTATGACA
GCCAATCGGGCGATGTGGGGCGGGGCCGGCGCCAATGGCACGGCGGAGGG
AGTCGGACACGTACAGCCCCTAGGCTACGGTGCTTACGGTGAGTTCGCGC
CGGCAGGATGCGGGGAGAGGGAGACTGCATTGAGTCCCTTCTACGGGGGT
GTCGTTTGTTCTTTGATGCGACGACTTCTATCTCGGGAGTGAAGAGAAAT
AGATATAGGAGGAGATGGATATTACGGAGGGATAGCGAGCGGGAGGGGGA
AAGCAGAGACGGGCAGTAAAGGGGGGTTGGTCGCAAAAGGTAAAGCATCG
ACGAGTAATGGAGGATATGAAGACAAGTGCGGTAGCCTCCATAGTGGTTG
CTCTAGCAGCTTGTCTGTCGTTGGTGTGTCCCTTTTCACGTGTGTCGATA
CATCCACGCGATGTGTGTATTCGCTACAGGTTCTTCGGCGCACGGAGGCG
CAGCGGCGCCCTCAGCAAGCCATCACGGCGGCAGCGGCGGCCACAAGACC
CACGCCCACAAGAAGCGGCATCCAGACGGGCAAAGCCACGGCCACAAAAA
AAAGGCAGGTTCTCACGGATCGATTCGAGCGAGAAAGGGGGATGAGGGAA
CGAGAACGGGGAGGTGGAGCCGGAATAGGAACAGGGAATAGCTGGCTGGT
GGTGGCATGCCTTGTGCTACAGCAGCGGCGAAGGGATGTATGATTTCTTT
TTCTTAAGTTTGGTTGCCACGTGCAAGCTTATGTCTATCAGTTGTCCATT
TGGTATTTGCGCGGGTGTCATGTTGAGATGGTTCTTCTGAAGGTAGCAGC
AGTGCTTGCTAGGAGGAAGCGTGTCAGAGTGAGCCACCCAGAGCGGTTTT
CCCACGAAATGGCGCCCCATCCGGTCTAAGTTTATTGCTCATTGCGCTGC
GAAGCGTAGGGCTTGGCCTGTCCCGTCCATTTCATCAGGGTCCCTGAACA
GGAAAACACCAGTGAGATATGCGAGCGGACCTCCCTTCAATAGCACCAAA
GGATGGAAACGACCCGCTTGCACGAACGATGGCATGACGCGTTCTGCCGC
TGCTACCCGCACCTCGCGCCTTGCTCCTGTGATGCACCGCAGAAGAAAAA
GAGGACTTCGACAGGTGCCGGCTCGGGCTCGTATCTCGGCGCGAGTTCTC
AGGGCGGTGGCGGCGACGGAAGCGGGGGTGGGGGTTCCGCCGGATCTTCG
GCGACGGCCGGCCGATACGACACCCTTTAGCTTAGCAACGACATTTTGTA
ATATTCTAATTCCTCGGCGCTGGTCAACCGCCTGGCATCGAGCAGTCTAA
CTTAATGGATAAAACGTTTAGAAGAAGAAACCGGGAAACACGCAGAAAGA
GGGGGCGGATGCGACGTCAATGTGATCGGGCATTTTTTTCTTAATGTCAT
TTGTGATGGTGAGGCGGTCCGCGCCGAATGTTATCCGACTTTCTGGCCAC
TTGATCTTGAATACTTGACCCTATAGTCTATGAATACAGAGACTTCCTGC
ATTTTGAATTGGCAACCTGGGCTTGGGCGACCCGGTTCCACTTTGTCACG
AAGCTTGTGGCCGGGTGTGGTTTGCCTGTCCAACGGATTGCCCATGGACT
ACGTGTTTGCGCTGGCAAAATCAAAAAGCATTTGTTTTTATGCATGGGGT
TCATTGGCTGTCGAAAAAGACCCTTCTTCCTTACCCCGTAGACCCTTTAC
CAGTTCACGTCAGCCTCTCGTGGGGACTTATTCGGAATTGGACGAGGTGT
GTCGGTATCGAGCCGACTGGGGTTGCCGATGATCCTCTTTCTTGGTCTCA
AGCATGGTATTCAATGTTTCCGTGTCATGTCGTGATGACTCAAATAGCGC
ACGCCAATGTTCGGGAAGAGTGGATGTTCATTTCCCCTTAGGTGGACGGA
CGGTAGACGGGCGCGCCAAAGGGGAGCGTTGCTTTTTGTCATTTTACTAG
TTGTGTCGTGCGAATTTACTCTCGTTTCGCTTTCTCCTACATGTAAGGTT
CGAATTCGTCTTACTTGCACCCAAAGCTTACTTATAACATG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig14:1666125..1670565+ >mRNA_P-fluviatile_contig14.2193.1 ID=mRNA_P-fluviatile_contig14.2193.1|Name=mRNA_P-fluviatile_contig14.2193.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1446bp|location=Sequence derived from alignment at P-fluviatile_contig14:1666125..1670565+ (Porterinema fluviatile SAG_2381) ATGGGGGTGTCTTCCCAGCCTTCCTCGAGTCCTACTCCCAACGCCGACAG CCTTGTGGTCAACTCGGACGAGATGCGTACCCTGATACAACACAGAAAAT GGGGGTGTCTTCCCAGCCTTCCTCGAGTCCTACTCCCAACGCCGACAGCC TTGTGGTCAACTCGGACGAGATGCGTACCCTGATACAACACAGAAAAGAG CTAGACGAAAGCCTCGCGCAGATGGAGGCGCAGATTTTCCACGACGAGGG CGCGTACATCAAGGAGACCCCGTGCGGGAACGTCATTCGTGGCTTCGACA GCTTTCACGACTGAGAGCTAGACGAAAGCCTCGCGCAGATGGAGGCGCAG ATTTTCCACGACGAGGGCGCGTACATCAAGGAGACCCCGTGCGGGAACGT CATTCGTGGCTTCGACAGCTTTCACGACTGCAAGCTGAACGCCGACCAGC CCAAGAAGTCCCGCTTGGAAGTCATCGAGGAGCGGATATTCAGCAAATCC TCTTTCCTCTTCTGGCAGAGGTCGCGAGAACGCAAGCTGAACGCCGACCA GCCCAAGAAGTCCCGCTTGGAAGTCATCGAGGAGCGGATATTCAGCAAAT CCTCTTTCCTCTTCTGGCAGAGGTCGCGAGAACGGGCCGCGAGAGAAGAA GCCAAAAAGCGGGAGCGCGAGCAGCACCAGGCTATGACAGCCAATCGGGC GATGTGGGGCGGGGCCGGCGCCAATGGCACGGCGGAGGGAGTCGGACACG TACAGCCCCTAGGCTACGGTGCTTACGGGCCGCGAGAGAAGAAGCCAAAA AGCGGGAGCGCGAGCAGCACCAGGCTATGACAGCCAATCGGGCGATGTGG GGCGGGGCCGGCGCCAATGGCACGGCGGAGGGAGTCGGACACGTACAGCC CCTAGGCTACGGTGCTTACGGTTCTTCGGCGCACGGAGGCGCAGCGGCGC CCTCAGCAAGCCATCACGGCGGCAGCGGCGGCCACAAGACCCACGCCCAC AAGAAGCGGCATCCAGACGGGCAAAGCCACGGCCACAAAAAAAAGGTTCT TCGGCGCACGGAGGCGCAGCGGCGCCCTCAGCAAGCCATCACGGCGGCAG CGGCGGCCACAAGACCCACGCCCACAAGAAGCGGCATCCAGACGGGCAAA GCCACGGCCACAAAAAAAAGAAGAAAAAGAGGACTTCGACAGGTGCCGGC TCGGGCTCGTATCTCGGCGCGAGTTCTCAGGGCGGTGGCGGCGACGGAAG CGGGGGTGGGGGTTCCGCCGGATCTTCGGCGACGGCCGGCCGATACGACA CCCTTTAGAAGAAAAAGAGGACTTCGACAGGTGCCGGCTCGGGCTCGTAT CTCGGCGCGAGTTCTCAGGGCGGTGGCGGCGACGGAAGCGGGGGTGGGGG TTCCGCCGGATCTTCGGCGACGGCCGGCCGATACGACACCCTTTAG back to top
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