prot_P-fluviatile_contig14.2131.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig14.2131.1
Unique Nameprot_P-fluviatile_contig14.2131.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length317
Homology
BLAST of mRNA_P-fluviatile_contig14.2131.1 vs. uniprot
Match: A0A6H5JHZ8_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHZ8_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 4.720e-114
Identity = 161/256 (62.89%), Postives = 202/256 (78.91%), Query Frame = 0
Query:    1 MTTPLYVLKPISTGYKEVLLLPGTRFIGRSAATGIKSPIVSRKHVEVSVDSQSCQVRYCAKFKSEVKLNGAPVNKEWVTLPVGARLELVASGGEAFPYRLERYANVAPAAPSSLADSGVGGGSSGKSAVYCDQHREMTTRLNCSICSDLYVDPTELDCQGKHLFCHSCLHDFLTSDGCSNKCPVCTTEIGREKRREIIKAGRKRKATGARMGPSKRYQSQAVGLVQDMIEWLIDRRMVDYDDESEWRRRSGLEPLP 256
            MTTPLYVLKPIS+GYKEVLL PGT+FIGRS ATGI+S +VSRKH+EV+V+   C+VRYCAKFKSEVK++ A V KEWV  PVG RLE + +  EAFPYRLERY+  + A  ++ A           +AV CDQH+E+TTRL C +C DL+VDP ELDC+GKHL+CHSC++D + ++ C NKCP C T I    R++I++AGRKR A+G  +G +KRYQSQAVGLVQ++IEWLI++RMV YDDE+EWR+RSGLEPLP
Sbjct:    1 MTTPLYVLKPISSGYKEVLLPPGTKFIGRSVATGIQSQVVSRKHIEVAVEGDVCKVRYCAKFKSEVKIDNALVKKEWVPFPVGGRLEFLENPVEAFPYRLERYSTASSATAAAEASGNT-------AAVACDQHQEITTRLACPMCYDLFVDPIELDCKGKHLYCHSCIYDLVKNESCQNKCPTCMTSISSSTRKKILQAGRKRGASGMPVGANKRYQSQAVGLVQEVIEWLIEKRMVKYDDETEWRKRSGLEPLP 249          
BLAST of mRNA_P-fluviatile_contig14.2131.1 vs. uniprot
Match: D7FQD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD6_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.260e-47
Identity = 72/112 (64.29%), Postives = 94/112 (83.93%), Query Frame = 0
Query:  145 ICSDLYVDPTELDCQGKHLFCHSCLHDFLTSDGCSNKCPVCTTEIGREKRREIIKAGRKRKATGARMGPSKRYQSQAVGLVQDMIEWLIDRRMVDYDDESEWRRRSGLEPLP 256
            +C DL+VDP ELDC+GKHL+CHSC++D + +  C NKCP+C T I    R++I++AGRKR A+G  +G +KRYQSQAVGLVQ++IEWLI++RMV YDDE+EWR+RSGLEPLP
Sbjct:    1 MCYDLFVDPIELDCKGKHLYCHSCIYDLVKNGSCQNKCPICMTSISSSTRKKILQAGRKRGASGMPVGANKRYQSQAVGLVQEVIEWLIEKRMVKYDDETEWRKRSGLEPLP 112          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHZ8_9PHAE4.720e-11462.89RING-type domain-containing protein (Fragment) n=1... [more]
D7FQD6_ECTSI2.260e-4764.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 123..236
e-value: 4.1E-13
score: 51.4
NoneNo IPR availableGENE3D2.60.200.20coord: 3..103
e-value: 3.9E-9
score: 38.2
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 138..191
IPR041388PNK, FHA domainPFAMPF17913FHA_2coord: 7..100
e-value: 1.4E-5
score: 25.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 143..186
score: 10.011
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 6..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1198063..1203527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2131.1mRNA_P-fluviatile_contig14.2131.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig14 1196620..1203612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig14.2131.1 ID=prot_P-fluviatile_contig14.2131.1|Name=mRNA_P-fluviatile_contig14.2131.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=317bp
MTTPLYVLKPISTGYKEVLLLPGTRFIGRSAATGIKSPIVSRKHVEVSVD
SQSCQVRYCAKFKSEVKLNGAPVNKEWVTLPVGARLELVASGGEAFPYRL
ERYANVAPAAPSSLADSGVGGGSSGKSAVYCDQHREMTTRLNCSICSDLY
VDPTELDCQGKHLFCHSCLHDFLTSDGCSNKCPVCTTEIGREKRREIIKA
GRKRKATGARMGPSKRYQSQAVGLVQDMIEWLIDRRMVDYDDESEWRRRS
GLEPLPPPKRSGGGGEKGGPSSGAVASTTNIHGGVFSGGASGGADEVINL
LSDSADEDDSYSEDDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR041388FHA_2
IPR001841Znf_RING
IPR008984SMAD_FHA_dom_sf