mRNA_P-fluviatile_contig14.2126.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2126.1 vs. uniprot
Match: A0A6H5LAW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW1_9PHAE) HSP 1 Score: 496 bits (1277), Expect = 1.960e-169 Identity = 279/436 (63.99%), Postives = 328/436 (75.23%), Query Frame = 3
Query: 30 CESDMWLRILTAVTLCAVGAGKSDVSFICPTQLQMRSLDLPPTLA-------CAQRVRYPTRHPRATTARGGT---TMMAGPNRGQKADFFADWPVLEAELRAYLAEREAGEPKKSGEA-KPRGAGGAFLNFLSVNPTQMALENEPEKDEWDGDVNVLSYSELTRYGYGYLIEPMMRSGGYVAASKRMGIELESRTLKDREYYDRTSPIVGLDMKERAETDGFLTLGSAREERLERMAKIDREERKKSLFEKQAMMDKSQKYKTKAADKGTAGQASLLKPRRKGVP---GGRSKEELDAELFRKPGLPEELRDVTEWVPPVRVEDGLPPQPLLFNLAQRANAVAVCACLALAFGKGTVDAMERGLVSREVAEVAQPASLFLLGLNVASAAAGASMAKSKGRSAPLWVFKGVLAGLASVLELKGLPELVPISSSDGA 1295
C MWL ++TA+ LC GAG V I PT SL PT + C++R R PT MMAGPN+GQK FFA+WPVLEAE+RAYL ER+AG+P+K G + +GAGG LNFLSVNPTQMALENEP++DEWDG+VNVLSYSELTRYGYGYLIEPMM+ GGYVAAS+RMGI+L +RTLKD EYY+RT+P VGLD++++A+ DGFLTLGSA+EERL +A + RE+R+KSLFEKQAMMDK K K A K + +L RK VP GGRS++E+D E+FRKPGL E RD++EWVP VR ED LP QPLL N AQRANAVAVC CL+LAFGKGT+DA+E GL+ R+VAE A PASLFLLGLNVASA AGAS+AK+KGRS PLWVFKG LAGL SVLELKGLPELVP+ SS A
Sbjct: 2 CTLTMWLPVITAI-LCVAGAGGFYVRTIAPTA----SLKPSPTSSSSRCHARCSRR-RLPTXXXXXXXXXXXXRTIVMMAGPNQGQKPGFFAEWPVLEAEIRAYLDERQAGDPEKGGGGVESKGAGGTLLNFLSVNPTQMALENEPDRDEWDGEVNVLSYSELTRYGYGYLIEPMMKIGGYVAASERMGIDLNARTLKDNEYYERTNPTVGLDIQKKADKDGFLTLGSAKEERLNSVANVSREDRRKSLFEKQAMMDKKTKAKKAATKK-----SRVLNTSRK-VPVNLGGRSQKEVDEEIFRKPGLTAEQRDISEWVPEVRAEDALPAQPLLLNFAQRANAVAVCGCLSLAFGKGTLDALETGLLPRDVAEAAVPASLFLLGLNVASAVAGASIAKNKGRSVPLWVFKGALAGLTSVLELKGLPELVPLGSSSSA 425
BLAST of mRNA_P-fluviatile_contig14.2126.1 vs. uniprot
Match: A0A6V2IIN7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IIN7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.590e-8 Identity = 101/359 (28.13%), Postives = 152/359 (42.34%), Query Frame = 3
Query: 276 DWPVLEAELRAYLAERE---AGEPKKSGEAKPRGA--GGAFLNFLSVNPT-QMALENEPEKDEWDGDVNVLSYSELTRYGYGYLIEPMMRSGGYVAASKRMGI---ELESRTLK---------DREYYDRTSPIVGLDMKERAETDGFLTLGSAREERLERMAKIDREERKKSLFEKQAMMDKSQKYKTKAADKGTAGQASLLKPRRKGVPGGRSKEELDAELFRKPGLPEELRDVTEWVPPVRVEDGL----PPQPLLFNLAQRANAVAVCACLALAFGKGTVDAMERGLVSRE-----VAEVAQPASLFLLGLNVASA-AAGASMAKSKGRSAPLWVFKGVLAGLASVLELKGLPEL 1268
D L+ EL AYL +RE A E K K G G A L F+S +P + +E P N Y E+T+YGYGYL++P+M +GG A K M + + +R K DRE + + GL M + + D E+ +R + RKK L E +Y+ ADK G PR+ P + E++D E RK G + EW R DG + + R A C ++ AFG+ T A+ ++ + ++ Q +L L+ + S+ +G +A K RS+ W KG+L G +VL+L+ L L
Sbjct: 81 DLEGLKEELTAYLKKREEMNADEAAKEQIGKIVGGTKGNAVLEFVSGSPNKEYKIEEVP---------NAFDYDEITKYGYGYLVKPIMNAGGRRAMYKLMNMPEPSISTRLTKPKSARKLVIDREGKEDKARYSGLKMTQMLDDDAMARALMEANEKAKRGESL----RKKLLEE---------EYEMPFADKRNVG------PRQ--TPDW-TPEKID-EANRKRG------EALEWAR--RARDGEFRKDDDERAAVEGSLRIYASIACLFVSFAFGRSTPAALSLAGINASGEGGLLLDILQVPALALVAAGIGSSIVSGVVLAPGKNRSSLTWFLKGLLGGPLAVLKLRELERL 399
BLAST of mRNA_P-fluviatile_contig14.2126.1 vs. uniprot
Match: B5YNF0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNF0_THAPS) HSP 1 Score: 66.6 bits (161), Expect = 4.440e-8 Identity = 99/357 (27.73%), Postives = 154/357 (43.14%), Query Frame = 3
Query: 288 LEAELRAYLAERE---AGEPKKSGEAKPRGA--GGAFLNFLSVNPTQMALENEPEKDEWDGDVNVLSYSELTRYGYGYLIEPMMRSGGYVAASKRMGIELESRTLKDREYYDRTSPIVGLDMKERAETDGFLTLGSAREERLERMAKIDREERKKSLFEKQAMMDKSQKYKTKA---------ADKGTAG--QASLLKPRRKGVPGGRSKEELDAELFRKPGLPEELRDVTEWVPPVRVEDGLPPQPLLFNLAQ---RANAVAVCACLALAFGKGTVDAMER-GLVSREVAEVAQPASLFLLGLNVASAAAGAS-MAKSKGRSAPLWVFKGVLAGLASVLELKGLPELVPISSSDGA 1295
L+ EL YL +RE A E KS K G G L+F+S +P + ++ E +V Y ELT+YGY YL+ P+M++GG A + M L +R +++P + +D ETD AR L+ A +D + K+L E + + + + K AD G Q L P E+LD E RK G + W R+ + L P + R ++ V +ALAFG T A+ G+ S ++ +V + +L LL S A +A K RS+ +W KG+ G S+ +L+ L +L+ I S+ +
Sbjct: 82 LKVELAEYLRKREEANADEAAKSEVGKVIGGTRGNIVLDFVSGSPNKQRVQEEAP--------DVFDYDELTKYGYSYLVTPIMKNGGRRAMYQLMN--LPEPATPERLTKKKSAPKLVIDRT--GETD------KARYTGLKMSAAMDDDAMGKALEEAARKVKQGESLRKKLVEEDYVLPYADNTNKGPRQTPLWTP-----------EKLD-EAGRKAG------EAQAWARKARMGE-LKKDPFEILAVEGELRVYSIVVAFTVALAFGNATPTALRMLGVGSDDMLDVFRVPALALLAAGFGSCLMNALVLAPPKRRSSFVWGLKGLFGGPLSIRQLRELDDLMTIGESESS 401
BLAST of mRNA_P-fluviatile_contig14.2126.1 vs. uniprot
Match: A0A0G4H5C6_VITBC (Guanylate kinase-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H5C6_VITBC) HSP 1 Score: 64.3 bits (155), Expect = 4.420e-7 Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 3
Query: 240 GPNRGQKADFFADWPVLEAELRAYLAERE----AGEPKKSGEAKPRGAGG--AFLNFLSVNPTQMALENEPEKDEWDGDVNVLS--------------YSELTRYGYGYLIEPMMR-SGGYVAASKRMGI 566
GPNR Q++ FF + LE+E++ YL +RE G P G+ G GG AF+ + + + DG + LS Y EL+RYGYGYL++P+MR GGY+ S+R+ +
Sbjct: 14 GPNRHQQSAFFGSFDALESEVQHYLGDRERQIITGAPAAEGD---HGNGGLQAFIRW------PFGRSERHRQGDSDGQQSPLSAQDVRERLARAPLEYGELSRYGYGYLVDPIMRYHGGYIRVSQRLNL 134
BLAST of mRNA_P-fluviatile_contig14.2126.1 vs. uniprot
Match: A0A8J2S627_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S627_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 3.990e-6 Identity = 45/159 (28.30%), Postives = 78/159 (49.06%), Query Frame = 3
Query: 282 PVLEAELRAYLAEREAG-----------EPKKSGEAKPRGAGGAFLNFLSVNPTQMALENEPEKDEWDG--DVNVLSYSELTRYGYGYLIEPMMRSGGYVAASKRMGIELESRTLKDREYYDRTSPIVGLDMKERAETDGFLTLGSAREERLERMAKID 719
P LEA++++YLA R+ E ++ E P G +L L L + DE+ +V+ LSY+EL +YG+G L++P+M +GGY A SK +G+ + + R P+ D+ G ++LG + EE++ + K++
Sbjct: 37 PALEADIKSYLAVRDQALRTNTTVDRGQEIREGTENNPVWQGANYLLSLDT-----FLPKDGNLDEYGRVKEVDALSYTELEKYGFGKLVQPIMDAGGYAAVSKALGVAVSA---------PRAPPVPSDDVVREGPQRG-VSLGGSIEEKMAEIGKLN 180
BLAST of mRNA_P-fluviatile_contig14.2126.1 vs. uniprot
Match: B7FW49_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW49_PHATC) HSP 1 Score: 58.2 bits (139), Expect = 2.280e-5 Identity = 99/380 (26.05%), Postives = 158/380 (41.58%), Query Frame = 3
Query: 201 RATTARGGTTMMAGPNRGQKADFFADWPVLEAELRAYLAERE---AGEPKKSGEAKPRGA--GGAFLNFLSVNPTQMALENEPEKDEWDGDVNVLSYSELTRYGYGYLIEPMMRSGGYVAASKRMGIELESRTLKDREYYDRTSPIVGLDM---KERAETDGFLTLGSAREERLERMAKIDREERKKSLFEKQAMMDKSQKYKTKAADKGTAGQ-ASLLKPRRKGVPGGRSKEELDAELFRKPGLPEELRDVTEWVPPVRVEDGLPPQPLLFNLAQRANAVAVCACLALAFGKGTV--------DAMERGLVSREVAEVAQPASLFLLGLNVASAAAGASMAKSKGRSAPLWVFKGVLAGLASVLELKGLPELVPISSSD 1289
R T+A G AGP A D L+ +L YLA+R+ A E K K G G A L F+S+ P + + P N L Y ELT+YGYG+L+ P+M +GG + K +GI+ + R +P + +D ++A G RM ++ + ++L E Q + ++ ++G A K P + E +D E R+ + R E V D P + L N QR ++ ++ AFG+ T D+ + V ++ + PA F+L ++ S+ +KSK RSA +W KG+L G +V +L+ L L+ D
Sbjct: 42 RLTSAPRGFRTNAGPLF--MAPKTMDLEELKLQLIEYLAKRKDVGADEKAKEDVGKVIGGSKGNAVLEFVSLAPNKGQVIETPS--------NALDYDELTKYGYGHLVTPIMNAGGRLEMYKLLGIDAPA---VKRPPPPPEAPKLVVDRIGENDKARYSGL------------RMGLLNDDAMAEALQEAQRKKRSGEPLRSALVEEGFVRPFADKRNVSPKSTPEW-TPERIDEETKRQGRSNDWARRAREGQ---FVRD--PMESLDLNFQQRVFSIFSALLVSTAFGRSTPIFLSQYLGDSTAKLSVLSFLSALQAPAGAFVLA-SIGSSIFCVVSSKSKNRSAIVWFIKGLLGGPLTVGQLRELDSLLTQGEQD 389 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2126.1 >prot_P-fluviatile_contig14.2126.1 ID=prot_P-fluviatile_contig14.2126.1|Name=mRNA_P-fluviatile_contig14.2126.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=438bp MWLRILTAVTLCAVGAGKSDVSFICPTQLQMRSLDLPPTLACAQRVRYPTback to top mRNA from alignment at P-fluviatile_contig14:1157162..1161588- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2126.1 ID=mRNA_P-fluviatile_contig14.2126.1|Name=mRNA_P-fluviatile_contig14.2126.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4427bp|location=Sequence derived from alignment at P-fluviatile_contig14:1157162..1161588- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1157162..1161588- >mRNA_P-fluviatile_contig14.2126.1 ID=mRNA_P-fluviatile_contig14.2126.1|Name=mRNA_P-fluviatile_contig14.2126.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2628bp|location=Sequence derived from alignment at P-fluviatile_contig14:1157162..1161588- (Porterinema fluviatile SAG_2381)back to top |