mRNA_P-fluviatile_contig14.2053.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: D7FQ99_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ99_ECTSI) HSP 1 Score: 271 bits (694), Expect = 4.880e-87 Identity = 141/154 (91.56%), Postives = 141/154 (91.56%), Query Frame = 3
Query: 57 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGAPGGGSGSGGKKAAGLY 518
MFLQLFVVNKSGGLIYNQNLSSAAPRL SNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLG VL EIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGAP KK AG Y
Sbjct: 1 MFLQLFVVNKSGGLIYNQNLSSAAPRLNSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGGVLQEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGGAPXXXXXXX-KKPAGQY 153
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: A0A835ZDL6_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL6_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.850e-61 Identity = 102/135 (75.56%), Postives = 119/135 (88.15%), Query Frame = 3
Query: 57 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNA 461
MFLQLF++NKSG LI++Q+LS AAPRL+SND LRLGSTFHSLHAIAAQVAP+ SSGIEKLET T++L+ QTLTG KFVITA+ TP+L VL IYELYTDYVLKNPFYELEMPIRCELFT +LE+L+ER++ A
Sbjct: 1 MFLQLFIINKSGSLIFHQDLSPAAPRLSSNDSLRLGSTFHSLHAIAAQVAPIASSGIEKLETATYRLRCLQTLTGAKFVITAQPNTPELEVVLQGIYELYTDYVLKNPFYELEMPIRCELFTQHLEKLVERYNAA 135
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: K8Z5G7_NANGC (Trafficking protein particle complex subunit (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z5G7_NANGC) HSP 1 Score: 199 bits (506), Expect = 6.040e-59 Identity = 98/133 (73.68%), Postives = 114/133 (85.71%), Query Frame = 3
Query: 57 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHS 455
MFL LFV+++SGGLIYN++LSS+APRLT N+WL LGSTFH LH+IAAQVAP+ SSGIEKLE D KLQ FQ+ TGVKFV+TAE GTPDL VLH IYELY DYVLKNPFYE++MPIRC+LF +E LIER+S
Sbjct: 4 MFLHLFVISRSGGLIYNKDLSSSAPRLTVNEWLVLGSTFHGLHSIAAQVAPLASSGIEKLECDNLKLQCFQSRTGVKFVLTAEPGTPDLDNVLHGIYELYADYVLKNPFYEMDMPIRCDLFQQGVERLIERNS 136
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: A0A7S2RJT7_9STRA (Trafficking protein particle complex subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJT7_9STRA) HSP 1 Score: 195 bits (496), Expect = 2.120e-57 Identity = 94/137 (68.61%), Postives = 112/137 (81.75%), Query Frame = 3
Query: 57 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAGG 467
MFL LF++++SGGLI+NQ+LS APRL +NDWLRLGSTFH HAIA+Q+APV SSGIEKLETD+F L+ FQ TG+KFVITAEAGT DL VL +Y+ YTDYVLKNPFYELEMPIRCELFT + +I+ H + G
Sbjct: 1 MFLHLFIISRSGGLIFNQDLSELAPRLNANDWLRLGSTFHGFHAIASQIAPVVSSGIEKLETDSFVLRCFQPPTGIKFVITAEAGTQDLEVVLQRVYQAYTDYVLKNPFYELEMPIRCELFTEAIARVIQSHGSQTG 137
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: K3WRL1_GLOUD (Trafficking protein particle complex subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRL1_GLOUD) HSP 1 Score: 182 bits (462), Expect = 2.160e-52 Identity = 87/127 (68.50%), Postives = 104/127 (81.89%), Query Frame = 3
Query: 69 LFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 449
L+++NKSGGL+Y Q+LSSAAP+L+SND LRLGSTFHS+HAIA +PV S GIE LETDTF+LQ FQT TG+KF +TA GTPDL AVL +YELY DYVLKNPFYELEMPIRC LF L+ +++
Sbjct: 5 LYIINKSGGLVYQQDLSSAAPKLSSNDHLRLGSTFHSMHAIAVLASPVASGGIETLETDTFRLQCFQTPTGLKFFLTAALGTPDLDAVLRTVYELYVDYVLKNPFYELEMPIRCSLFNSGLKTFVDK 131
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: A0A2D4CAE8_PYTIN (Trafficking protein particle complex subunit n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAE8_PYTIN) HSP 1 Score: 181 bits (460), Expect = 4.270e-52 Identity = 89/127 (70.08%), Postives = 101/127 (79.53%), Query Frame = 3
Query: 69 LFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 449
L+++NKSGGLIY +LSSAAPRL+SND LRLGSTFHS+HAIA APV S GIE LETDTF+LQ FQT TG+KF ITA GTPDL L IYELY DYVLKNPFYELEMPIRC LF L+ +++
Sbjct: 5 LYIINKSGGLIYQLDLSSAAPRLSSNDHLRLGSTFHSMHAIAVLAAPVASGGIESLETDTFRLQCFQTPTGIKFFITAALGTPDLDHALRTIYELYVDYVLKNPFYELEMPIRCSLFNAGLKSFVDK 131
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: F0WDB3_9STRA (Trafficking protein particle complex subunit n=3 Tax=Albugo TaxID=65356 RepID=F0WDB3_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.110e-51 Identity = 88/130 (67.69%), Postives = 104/130 (80.00%), Query Frame = 3
Query: 69 LFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSN 458
L+++NKSGGLIY Q+LS AAP+L+SND LRLGSTFHS+HAIAA APV S GI LETDTF+LQ FQTLTG+KF ITA+ GT D+ L IYELY DYVLKNPFYELEMPIRC LF L+ +++ +N
Sbjct: 5 LYIINKSGGLIYQQDLSPAAPKLSSNDHLRLGSTFHSMHAIAALAAPVASGGINSLETDTFRLQCFQTLTGIKFFITAQLGTLDIDNALKTIYELYVDYVLKNPFYELEMPIRCTLFNAGLKLFVDKFNN 134
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: A0A6G0XR37_9STRA (Trafficking protein particle complex subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR37_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.470e-48 Identity = 88/133 (66.17%), Postives = 105/133 (78.95%), Query Frame = 3
Query: 57 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 449
M L L+V+NK+GGLIY Q+LSS AP+L+SND+LRLGSTFHS+HAIAA APV S GI +ETD+F+LQ FQ +TG KF ITA + +L AVL +IYELY DYVLKNPFYELEMPIRC LF L+ L+ER
Sbjct: 1 MLLSLYVINKAGGLIYQQDLSSEAPKLSSNDYLRLGSTFHSMHAIAALAAPVLSKGILSMETDSFRLQCFQAMTGTKFFITALPVLSSAELDAVLLQIYELYADYVLKNPFYELEMPIRCHLFHSNLQLLVER 133
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: A0A7S4A735_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A735_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.620e-48 Identity = 83/136 (61.03%), Postives = 103/136 (75.74%), Query Frame = 3
Query: 57 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITAEAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIERHSNAG 464
M+LQL ++NKSGGL+YNQ+LS A +L SNDWLR+GSTFHSLH IA + P SSGI LET +F L+ +T+TG+KFV+TAE GT L VL +YELY+DYVLKNPF++LEMPIRC LFT ++ EL E G
Sbjct: 1 MYLQLMIINKSGGLVYNQDLSPQAAQLDSNDWLRIGSTFHSLHEIARSIPPGRSSGIVALETSSFALRCLETITGIKFVLTAERGTQVLEPVLRMVYELYSDYVLKNPFHDLEMPIRCRLFTEHVTELFESFHTTG 136
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Match: A0A397BNG8_9STRA (Trafficking protein particle complex subunit n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BNG8_9STRA) HSP 1 Score: 170 bits (431), Expect = 9.410e-48 Identity = 85/133 (63.91%), Postives = 105/133 (78.95%), Query Frame = 3
Query: 57 MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAPVPSSGIEKLETDTFKLQSFQTLTGVKFVITA--EAGTPDLGAVLHEIYELYTDYVLKNPFYELEMPIRCELFTLYLEELIER 449
M L LFV+NK+GG++Y Q+LS+ AP+++SND LRLGSTFHS+HAIAA APV S GI ++TD+F+LQ FQTLTG KF ITA + DL AVL +IYELY DYVLKNPFYELEMPIRC LF L+ L+++
Sbjct: 9 MLLSLFVINKAGGVVYQQDLSAEAPKISSNDRLRLGSTFHSIHAIAALAAPVASKGIVSMDTDSFRLQCFQTLTGTKFFITALPNISSGDLEAVLRQIYELYADYVLKNPFYELEMPIRCHLFYTNLQLLVDK 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2053.1 >prot_P-fluviatile_contig14.2053.1 ID=prot_P-fluviatile_contig14.2053.1|Name=mRNA_P-fluviatile_contig14.2053.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=155bp MFLQLFVVNKSGGLIYNQNLSSAAPRLTSNDWLRLGSTFHSLHAIAAQVAback to top mRNA from alignment at P-fluviatile_contig14:546019..548783- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2053.1 ID=mRNA_P-fluviatile_contig14.2053.1|Name=mRNA_P-fluviatile_contig14.2053.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2765bp|location=Sequence derived from alignment at P-fluviatile_contig14:546019..548783- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:546019..548783- >mRNA_P-fluviatile_contig14.2053.1 ID=mRNA_P-fluviatile_contig14.2053.1|Name=mRNA_P-fluviatile_contig14.2053.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=930bp|location=Sequence derived from alignment at P-fluviatile_contig14:546019..548783- (Porterinema fluviatile SAG_2381)back to top |