mRNA_P-fluviatile_contig14.2019.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI) HSP 1 Score: 231 bits (590), Expect = 4.720e-68 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 1
Query: 1 LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDILETFRDLSSPGKKGKEVTKAAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFAG 393
LFTFPLV DVELLV+QEDVDFVQRIVVGTRLAALLPQDILETFRD ++ G +GKEVTK AFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDR QEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLF G
Sbjct: 693 LFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKATSGPRGKEVTKEAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRMQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFGG 823
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE) HSP 1 Score: 231 bits (590), Expect = 4.890e-68 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 1
Query: 1 LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDILETFRDLSSPGKKGKEVTKAAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFAG 393
LFTFPLV DVELLV+QEDVDFVQRIVVGTRLAALLPQDILETFRD ++ G +GKEVTK AFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDR QEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLF G
Sbjct: 705 LFTFPLVPDVELLVMQEDVDFVQRIVVGTRLAALLPQDILETFRDKATSGPRGKEVTKEAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRMQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFGG 835
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A7S4DHJ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHJ8_HETAK) HSP 1 Score: 83.6 bits (205), Expect = 1.990e-17 Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 172 KAAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFA 390
KA FD ++ LV + + ED++ LLSFAL+N+FF+YD Q + LRDL CGLS LC G+KS+KLAF + L+A
Sbjct: 2 KAEFDAAVRALVPERFLTEDDKGLLSFALSNLFFSYDLAQADKAALRDLLCGLSLLCAGTKSAKLAFTFQLYA 74
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A7S1G6W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6W4_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.250e-12 Identity = 43/112 (38.39%), Postives = 68/112 (60.71%), Query Frame = 1
Query: 52 DVDFVQRIVVGTRLAALLPQDILETFRDLSSPGKKGKEVTKAAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLF 387
DV +QR+ RL + P+ + +R +S K G + K+ FD +++LV +S+ ++++ LSFAL+N+F+A+DR Q G V + A G S L GSKS KL+ A+ LF
Sbjct: 294 DVANLQRLNDKARLQRMSPEQL---YRAFASEAKDGV-LDKSGFDRVVRQLVPGESLTKEDKGYLSFALSNVFYAFDRDQNGVVDFNEFASGFSILAGGSKSDKLSLAFHLF 401
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A7S3UWA7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA7_HETAK) HSP 1 Score: 67.0 bits (162), Expect = 9.540e-11 Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 52 DVDFVQRIVVGTRLAALLPQDILETFRDLSSPGKKGKEVTKAAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLF 387
D+D +RI ++ L +D+ + + + +TK ++ +++LV ++ ++ +LS + IFFA D +E + L R L CGLS LC GSKS KLAF Y LF
Sbjct: 2 DLDESERIRAVADISRLSHRDVESIYDAIRLYSTDPEYITKEEYNQCLRDLVPGSTLSTSDKHMLSTEFSKIFFALDPAEEDKALHRHLICGLSLLCAGSKSVKLAFTYRLF 113
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A7S1VNM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNM3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.490e-8 Identity = 48/155 (30.97%), Postives = 75/155 (48.39%), Query Frame = 1
Query: 1 LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDILET-FRDLSS----------------PGK-KGKEVTKAAFDTGMQELVRLQSMLEDERDL--------LSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLF 387
LFTFPL + L+VL+ED +V+ +V L + D+ + ++++ S PG K +V ++ F +E++ S + R +S L N F ++D +Q RV L L GLS LC G KS+KLAF++ LF
Sbjct: 64 LFTFPLANERSLIVLREDATYVRSVVEKLGLLTMTSDDVWKLLYKNVKSRPAPPPQPWTRSRQRKPGTGKSVDVDQSTFVRCTEEIIHTNSKGNNGRKRQSGTKGTSISETLVNFFQSFDLEQIDRVALNQLMGGLSLLCGGKKSTKLAFSFGLF 218
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A7S2K2V1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K2V1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.590e-7 Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 1 LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDILETFRDLSSPGKKGKEVTKAAFDTGMQELVRLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFAG 393
+FTFPL L+VL++DV +V+++V L + P I + + + +T A F M L+ ++ D + L N ++D Q G V LA GL+ LC G KS KLAF++ LF+G
Sbjct: 228 MFTFPLAKGNSLIVLKDDVIYVRKVVHQLGLTKISPDAIWDALKAYPT-------MTNAQFVNTMCSLLAHNNVRVDNE--VQILLQNYQSSFDIHQTGYVPSNQLAGGLTLLCDGRKSHKLAFSFQLFSG 349
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A6V2DIZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2DIZ4_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.310e-7 Identity = 45/160 (28.12%), Postives = 72/160 (45.00%), Query Frame = 1
Query: 1 LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDILETF-----------------------RDLSSPGKKGKEVTKAAFDTGMQELV------RLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFAG 393
LFTFPL L+VL+ED +V+ +V L + ++I + R+ ++ K +V +A F + LV + + + + + L N F ++D +Q RV + L GLS LC G KS+KLAF++ LF G
Sbjct: 1205 LFTFPLANHQSLVVLREDAAYVRTVVTQLGLLSFSCEEIWSSLYKYVRNNPPYWQNSSSTSTAASQRNKTNGSGKCTDVDQATFVEAVDSLVNPSRGKKKKQQSQRDESISRVTLKNFFSSFDLEQVDRVAVNQLMGGLSLLCGGKKSTKLAFSFGLFDG 1364
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A7S1ZFP8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZFP8_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.340e-7 Identity = 45/160 (28.12%), Postives = 72/160 (45.00%), Query Frame = 1
Query: 1 LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDILETF-----------------------RDLSSPGKKGKEVTKAAFDTGMQELV------RLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLFAG 393
LFTFPL L+VL+ED +V+ +V L + ++I + R+ ++ K +V +A F + LV + + + + + L N F ++D +Q RV + L GLS LC G KS+KLAF++ LF G
Sbjct: 1202 LFTFPLANHQSLVVLREDAAYVRTVVTQLGLLSFSCEEIWSSLYKYVRNNPPFWQNSSSTSTAASQRNKTNGSGKCTDVDQATFVEAVDSLVNPSRGKKKKQQSQRDESISRVTLKNFFSSFDLEQVDRVAVNQLMGGLSLLCGGKKSTKLAFSFGLFDG 1361
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Match: A0A7S3L262_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L262_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.460e-6 Identity = 44/139 (31.65%), Postives = 66/139 (47.48%), Query Frame = 1
Query: 1 LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDI-------LETFRDLSSPGKKGKEVTKAAFDTGMQELV---RLQSMLEDERDLLSFALANIFFAYDRKQEGRVLLRDLACGLSFLCCGSKSSKLAFAYSLF 387
LFTFPL L+VL++D +V+ +V L ++ P D+ +E R + G V + F MQ + RL + + L+N F +D + V L +L GL+ LC G KS KLAFA+ +F
Sbjct: 689 LFTFPLANQSSLVVLRDDAYYVRSVVQELGLLSMNPDDLWASLLAKVEQQRKSLTMGGGAVYVGMSIFVGAMQSICPMSRLHNSAFRSEASTAELLSNFFQCFDLEANDNVALDELMGGLTLLCGGRKSHKLAFAFGVF 827 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2019.1 >prot_P-fluviatile_contig14.2019.1 ID=prot_P-fluviatile_contig14.2019.1|Name=mRNA_P-fluviatile_contig14.2019.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=131bp LFTFPLVTDVELLVLQEDVDFVQRIVVGTRLAALLPQDILETFRDLSSPGback to top mRNA from alignment at P-fluviatile_contig14:236245..238268- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2019.1 ID=mRNA_P-fluviatile_contig14.2019.1|Name=mRNA_P-fluviatile_contig14.2019.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2024bp|location=Sequence derived from alignment at P-fluviatile_contig14:236245..238268- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:236245..238268- >mRNA_P-fluviatile_contig14.2019.1 ID=mRNA_P-fluviatile_contig14.2019.1|Name=mRNA_P-fluviatile_contig14.2019.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=786bp|location=Sequence derived from alignment at P-fluviatile_contig14:236245..238268- (Porterinema fluviatile SAG_2381)back to top |