mRNA_P-fluviatile_contig13.1908.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: D8LS98_ECTSI (MsrB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS98_ECTSI) HSP 1 Score: 240 bits (613), Expect = 1.760e-73 Identity = 116/170 (68.24%), Postives = 130/170 (76.47%), Query Frame = 3
Query: 483 ETREAASHLSPETKAVLFGAADGVDGNGTELHGT----------------WRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGVVFVSCARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALPVRCQPENYWGSEGQYRAWVL 944
ET+ AASHLSP +A+LFG A D ++ WRDHR+KGLYACAVGGLPLFTSGWKLEPR +DDCPSFAEPCD+EH++EE DAE+GV VSCARS +R+GRVV D+ SPSGKRYLI S ALEFHPLGK LPVRCQPENYWGSEGQYRAWVL
Sbjct: 42 ETKAAASHLSPRQEAMLFGGAMEDDRQSSQARHDXXXXXXXXXXXXESRGWRDHREKGLYACAVGGLPLFTSGWKLEPRAEDDCPSFAEPCDDEHLVEEHDAENGVTAVSCARSRVRLGRVVGDAGSPSGKRYLIRSVALEFHPLGKPLPVRCQPENYWGSEGQYRAWVL 211
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A2E3RNF1_9BACT (Multifunctional fusion protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3RNF1_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 2.360e-16 Identity = 58/159 (36.48%), Postives = 76/159 (47.80%), Query Frame = 3
Query: 492 EAASHLSPETKAVLFGAADGVDGNGTELHGTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGV--VFVSCARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALPVRCQPEN----------YWGSEGQYR 932
E A L PET + +G GT D++ G Y C V GLPLF+S K PSF D+ HV EE D G+ V + CAR G +G V PD P+G RY ++SAALEFH G+ LP+ +P +WG E ++
Sbjct: 26 ELAKKLDPETYRITQ-----KEGTERPFCGTLLDNKLDGTYTCVVCGLPLFSSEHKFTSGTG--WPSFFTTYDQAHVHEEEDDSLGMKRVEIECARCGSHLGHVFPDGPKPTGLRYCLNSAALEFHEKGEELPMESRPVELETAYFAGGCFWGIEHYFQ 177
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A7C6E2D7_9BACT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C6E2D7_9BACT) HSP 1 Score: 85.1 bits (209), Expect = 4.810e-16 Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 3
Query: 498 ASHLSPETKAVLFGAADGVDGNGTELH--GTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGVVF--VSCARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALPVR 890
A+ L+ E + +L +GTE GT D++ +G YAC + GLPLF+S K + PSF P D+EH+ D G++ + CAR G +G V PD P+G+RY ++SA+LEF P G+ +P++
Sbjct: 13 AADLTEEERRILLN-------HGTEAPFCGTLLDNKLEGTYACRLCGLPLFSSRHKFDSGTG--WPSFFAPVDKEHIEYVRDTSYGMIRTEIRCARCGGHLGHVFPDGPPPTGQRYCLNSASLEFFPEGEEIPLK 138
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A7R9V9C9_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V9C9_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 1.050e-15 Identity = 52/133 (39.10%), Postives = 72/133 (54.14%), Query Frame = 3
Query: 492 EAASHLSPETKAVLFGAADGVDGNGTELHGTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGV---VFVSCARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKAL 881
EAA+ L +K ++ +G+ ++G +H+ KG Y CA+GGLP+F+S K E PSF P D EH+IE D + V V RSG +G V D P+GKRY I++AAL F P G+ L
Sbjct: 39 EAAAALPQASKFIVLQHGTERPFSGSTVNGYPHNHKGKGTYVCALGGLPVFSSDTKFESGTG--WPSFYAPFDPEHIIEVPDFSIPMMPRVEVLDRRSGAHLGHVFDDGPRPTGKRYCINAAALRFVPQGEPL 169
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A3D0P1E0_9BACT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A3D0P1E0_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 1.190e-15 Identity = 52/135 (38.52%), Postives = 73/135 (54.07%), Query Frame = 3
Query: 498 ASHLSPETKAVLFGAADGVDGNGTELH--GTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGVVF--VSCARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALPVR 890
A LS E + +L +GTE GT D++ G+YAC + GLPLFTS K + PSF P D+EH+ D G++ + CAR G G V PD P+G+RY ++SA+LEF P G+ +P +
Sbjct: 24 AGDLSEEERRILLN-------HGTEAPFCGTLLDNKLDGVYACRLCGLPLFTSRHKFDSGTG--WPSFHSPFDKEHLAYIRDTSYGMIRTEIRCARCGGHQGHVFPDGPPPTGQRYCLNSASLEFFPEGEDIPQK 149
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A0D2M0N9_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2M0N9_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 2.000e-15 Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 3
Query: 591 DHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGV---VFVSCARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALP 884
DH+ KG Y A+GGLPLF++ K PSF +P D EH++E D V V CA+SG +G V D +P+GKRY I++AAL+F P G+ LP
Sbjct: 108 DHKGKGTYVSAIGGLPLFSADHKFNSGTG--WPSFYKPVDYEHIVEVVDKSIPFMPRVEVVCAKSGAHLGHVFDDGPAPTGKRYCINAAALKFVPEGEPLP 206
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A2H5XYN4_9BACT (Multifunctional fusion protein n=1 Tax=bacterium HR21 TaxID=2035416 RepID=A0A2H5XYN4_9BACT) HSP 1 Score: 87.8 bits (216), Expect = 2.070e-15 Identity = 54/143 (37.76%), Postives = 73/143 (51.05%), Query Frame = 3
Query: 483 ETREAASHLSPETKAVLFGAADGVDGNGTE--LHGTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGVVFVS--CARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALPVRCQP 899
E R A L PE+ V A GTE G + +H++ G+YAC V GLPL+ S K + PSF++P D EHV D G+V C R G +G V D P+G+R+ ++SAAL F+P G LP +P
Sbjct: 24 EVRRRAEQLDPESYRVTQRA-------GTEPPFCGRFWNHKEPGIYACVVCGLPLYASQHKFDSGTG--WPSFSQPIDPEHVGRRPDFSHGMVRTELYCVRCGAHLGHVFDDGPPPTGERHCLNSAALRFYPQGAELPPESRP 157
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A7V9DBV9_9BACT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7V9DBV9_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 5.380e-15 Identity = 43/106 (40.57%), Postives = 62/106 (58.49%), Query Frame = 3
Query: 579 GTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGVVFVS--CARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALPVR 890
GT D++ G YAC + GLPLFTS K E PSF P D++H+ D+ G++ + CAR G G V PD P+G+RY ++SA+L+F P G+ +P +
Sbjct: 44 GTLLDNKQDGTYACRLCGLPLFTSKHKFESGTG--WPSFHSPFDKDHLENIKDSSYGMIRIEIRCARCGGHQGHVFPDGPPPTGQRYCLNSASLQFFPEGEDIPQK 147
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: A0A2V8SST6_9BACT (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8SST6_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 6.260e-15 Identity = 55/141 (39.01%), Postives = 77/141 (54.61%), Query Frame = 3
Query: 483 ETREA-ASHLSPETKAVLFGAADGVDGNGTELH--GTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGV--VFVSCARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLGKALPVR 890
ETR+ A L+ E VL G +GTE GT D++ G YAC + GLPLF+S K + PSF P D++H+ E AD G+ + + CAR G G V PD P+G+RY ++SA+LEF G+ +P +
Sbjct: 22 ETRDRLAQDLNEEEYRVLLG-------HGTEAPFCGTLLDNKLDGTYACRLCGLPLFSSKHKFDSGTG--WPSFYTPFDKDHLAEIADDSYGMRRIEIRCARCGSHQGHVFPDGPPPTGQRYCLNSASLEFFGEGEDIPQK 153
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Match: UPI001FE8506D (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI001FE8506D) HSP 1 Score: 82.4 bits (202), Expect = 6.750e-15 Identity = 53/134 (39.55%), Postives = 69/134 (51.49%), Query Frame = 3
Query: 483 ETREAASHLSPETKAVLFGAADGVDGNGTE--LHGTWRDHRDKGLYACAVGGLPLFTSGWKLEPRVDDDCPSFAEPCDEEHVIEEADAESGVVFVS--CARSGLRVGRVVPDSDSPSGKRYLISSAALEFHPLG 872
ET A L+PE + +L +GTE G D +++G+YAC + GLPLF SG K PSF +P D HV E D G+V C R +G V PD P+G RY ++SAALEF+P G
Sbjct: 26 ETDRLAEKLTPEERRILLD-------HGTERPFCGALLDSKERGVYACRLCGLPLFRSGDKFNSGTG--WPSFFQPFDPAHVREIEDRSYGMVRTETRCVRCDSHLGHVFPDGPPPTGLRYCMNSAALEFYPDG 150 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1908.1 >prot_P-fluviatile_contig13.1908.1 ID=prot_P-fluviatile_contig13.1908.1|Name=mRNA_P-fluviatile_contig13.1908.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=302bp MAATPDLLGAEFSPNVPPAESSAAFVTGSYSPAGTCNHHDKPLAVRRGLAback to top mRNA from alignment at P-fluviatile_contig13:2781266..2784963- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1908.1 ID=mRNA_P-fluviatile_contig13.1908.1|Name=mRNA_P-fluviatile_contig13.1908.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3698bp|location=Sequence derived from alignment at P-fluviatile_contig13:2781266..2784963- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2781266..2784963- >mRNA_P-fluviatile_contig13.1908.1 ID=mRNA_P-fluviatile_contig13.1908.1|Name=mRNA_P-fluviatile_contig13.1908.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1812bp|location=Sequence derived from alignment at P-fluviatile_contig13:2781266..2784963- (Porterinema fluviatile SAG_2381)back to top |