prot_P-fluviatile_contig13.1889.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig13.1889.1
Unique Nameprot_P-fluviatile_contig13.1889.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1123
Homology
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A6H5L6K7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K7_9PHAE)

HSP 1 Score: 639 bits (1648), Expect = 5.290e-209
Identity = 619/1016 (60.93%), Postives = 676/1016 (66.54%), Query Frame = 0
Query:    1 MAFNFDP--SSSKRAPF--APRCKSCRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSESGGSSNVVGQFVSGDKGRPSGGGAGRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRLPQSGASLGLDDDIGGAAAAAGFXXXXXXXXXXXXXXXXXXXXAFAGASILVGNAPMDPPCYIENRIKDGRLKLPPWLEPPPPPLGNYDGKVGRGKGAHGRKKTATGAGNVRPRVVARKHAAKGGQEARTSSKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEELVRLSSKMNVDANTEEGREALTRHVLHVRSSQDGGASRARSRAKRRKVQNSVYSCIENMLDEDEARGLCVDSEAGGXXXXXXXXXXXXXXXXXGEEATGKGGVSTAGGSATSKVSACLAAYLPSRLRSMITSSRQAEASASDRVYGKDREGGGARED-GDGD----------------GGVADDDLEWGVYLRTEEDSDRTKKEWEKEHQAWEEDQVDQSRSPPPSARSNSPE-TAQRKRKHTLSSSRNRGASTFRDALFAEAGKGRSGKINHAALELLMKPDGSLRQDN---DAMEEVFEDNLAPPAKAKDGKGFGAARVKSRLTASLSSPSPSSTQAMASTFAGAAVLPPARRLKNTAGKGAGAEGSAAPAHVGGGXXXXXXXXXXXKGHGVAAGSVAVKAPV-KEPWRRAGPDDGGQQAALDALAAMMGG 990
            MAFN  P   S   AP     RC SC  TN  +   SGDRAC  CG V QEN IVS+VQFSESGGSSNVVGQFVSGD+GRPSGGGA RGRGRFG SRDSR+ TIQNGKKKIIQVL QL LRT LA+ A RLFALCV QNYVQGRKTMNIVAACVYIVCRQ   PIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQ  VPIVDPAMYIKRFA+KLDLGSKTNAVCMTALKII SMKRDFLASGRQPAG+CCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRL EFEATPTSQLTVE+LN+LPQ+ A  G++D    A+AAA  XXXXXXXXXXXXX         A  S+LV +  MDPP +I NRI+DG LK+P W E                                  + V     AK           XXXXXXXXXXXXXXXXX                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     RLSSKM VDANTEEGREALTRHVLH+R+++ G AS+A+SRAKR KV++ VYSC+ENM DEDE RGL +D   GGXXXXXXXXXXXXXXXXX                                       ++     ASD    K R+GG A ED G+ D                     D LEWGVYLRTEEDSDRTKKEWEKEH+ W EDQ ++SR        N P    ++KRK+T S S   G + F +A+  EA K +S KI+HAAL+ +M  DGSL+Q N   D MEEVFEDNLAPP  +K+ KG    R KS LTASLSS   SST AM   F G AVLPPARR   TA        +AA + VG      XXXXXXX+G G     +A  A V K PW RAGP+DGG++A  DALA +  G
Sbjct:    3 MAFNRKPVPKSQMTAPQDGGTRCPSCGGTNFMDQPGSGDRACAECGTVVQENNIVSSVQFSESGGSSNVVGQFVSGDRGRPSGGGAARGRGRFGQSRDSRDATIQNGKKKIIQVLAQLHLRTTLADEAARLFALCVTQNYVQGRKTMNIVAACVYIVCRQNHFPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVAFPGVED----ASAAAXXXXXXXXXXXXXXXT--------AEKSVLVSDIRMDPPAFIANRIRDGALKMP-WTE----------------------------------QTVTETAGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVRPGVKRKRSPKDKAPRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-------------------ARLSSKMKVDANTEEGREALTRHVLHIRATKRG-ASKAKSRAKRSKVESEVYSCLENMFDEDEERGLSIDR--GGXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXGKAKSPAPPASDETL-KIRDGGAAGEDSGNKDQXXXXXXXXXXXXXXXXXXXXDGLEWGVYLRTEEDSDRTKKEWEKEHKDWVEDQTEKSRILSDETGLNPPGGVPKKKRKYTFSGSHAVGKN-FGEAISLEAAKSKSLKIDHAALQRVMNLDGSLKQVNEGDDVMEEVFEDNLAPPVPSKNSKGIRG-RGKSPLTASLSS---SSTPAMLKPFTGGAVLPPARRGNTTA--------TAACSDVG---PKAXXXXXXXRGGGKRVAPIAQPAAVVKAPWARAGPNDGGEKAIKDALALLKSG 920          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A7R9U6Q5_9STRA (B-related factor 1 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Q5_9STRA)

HSP 1 Score: 267 bits (683), Expect = 4.060e-74
Identity = 143/281 (50.89%), Postives = 193/281 (68.68%), Query Frame = 0
Query:   18 RCKSCRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSESGGSSNVVGQFVSGDKGRPSGGGAGRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNR 298
            +C  C S  IE +   GD  C  CG V +EN IVS+++F E+GG   V GQF+S    +P      RGRGR+ +SRDSR+TT+ NG+++I QV   LRL  +  E A RLF + VQ+++VQGRKTM +VAAC+YIVCRQ R P +LID SD L +NV+ LG TF K  K LNL+  +PIVDP +YI RFA+KL+ G K   VC+TAL+++ +MKR+++  GR+P G+C AALT+A R++  E  KEE+ K   V   T++ RL+EFEATP +QLT+EQ  R
Sbjct:   15 QCPECASLEIEVNDAGGDAVCVRCGTVVEENAIVSSIEFEETGG---VRGQFMSATAQKPYSSSV-RGRGRYSYSRDSRDTTLANGRRQIGQVASALRLNAHFTENAHRLFTIAVQRSFVQGRKTMRVVAACLYIVCRQERAPYLLIDFSDALQINVFKLGATFMKFKKLLNLK--LPIVDPGLYIHRFAAKLNFGKKETDVCVTALRLLKTMKRNWMEVGRRPLGLCAAALTMAARMHECEVDKEELLKTFPVSQGTIQLRLREFEATPAAQLTIEQFQR 289          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A7S2B4G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B4G7_9STRA)

HSP 1 Score: 254 bits (648), Expect = 7.760e-71
Identity = 138/291 (47.42%), Postives = 199/291 (68.38%), Query Frame = 0
Query:   19 CKSCRSTNIE-EDQTSGDRACQNCGVVQQENGIVSTVQFSES-GGSSNVVGQFVSGDKGRP-SGGGAGRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRLPQSGASL 306
            C SC ST+IE  D   GD  C  CG V +E+ IV++V+F ES GGS++VVGQFVS D G+  S    G  R R+G  R SR+TT+ NG++ I ++ GQLRL+T+  + A RLF + VQ+N+ +GR+TM++VA C+Y+VCR+ + P MLID SD L+VNVY LG  F K  + LNL+  +P++DP++YI RFA+++DLG KT+ V   AL+I+ +MKRD++ +GR+PAG+C AAL ++ R N   R++ E+ K  +VC  T+R RL EF  T  + LT E+L    ++   L
Sbjct:   15 CPSCGSTDIEWNDFGGGDAVCVACGTVCEESTIVNSVEFLESAGGSTSVVGQFVS-DSGKAYSSSMQGSARSRYGFMRSSRDTTLANGRRNIQELAGQLRLQTHFIDQAHRLFQMAVQRNFNKGRRTMHVVAVCLYVVCRKEKSPNMLIDFSDALSVNVYALGSCFLKFCRLLNLEDQIPLIDPSLYIHRFAARMDLGQKTSMVSQAALRIVANMKRDWMLTGRRPAGICAAALLISARANGFPRTQAEMVKVFRVCGMTIRMRLTEFSTTHAASLTNEELRNSEETARKL 304          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A7S2RQN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQN0_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.540e-70
Identity = 136/277 (49.10%), Postives = 195/277 (70.40%), Query Frame = 0
Query:   24 STNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSESGGSSNVVGQFVSGDKGRPSGGGA-GRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRL 299
            S +IE  +  GD  C  CG V +E+ IVS ++FSE+ G++ VVGQFVS +  +P  G      R R+G  R+SRETT+  GK  I +V G+LRL+ +  ++A RLF   VQ+N+VQGRKTM++VA C+YI CR+ + P MLID SD L+VNV+ LG  F K  + L++    P++DP++YI RFA+++DLG+KT AV  +AL+I+  MKRD++ +GR+PAG+C AAL +A R +   R++ E+ K ++VC  TVR RL+EFEATP +QLT++QL RL
Sbjct:    2 SLDIEWHEAGGDAVCVKCGTVCEESTIVSAIEFSETAGAATVVGQFVSENCSKPYMGSMHASARSRYGFMRNSRETTLAKGKASIAEVAGRLRLQNHYIDSAHRLFTFAVQRNFVQGRKTMHVVAVCLYIKCREDKSPHMLIDFSDALSVNVFTLGSCFLKFCRLLSID--TPLIDPSLYIHRFAARMDLGAKTQAVAQSALRIVARMKRDWIQTGRRPAGICAAALLIAARTHGFPRTQAEVVKILRVCGMTVRTRLEEFEATPAAQLTMDQLKRL 276          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A448Z1B8_9STRA (B-related factor 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1B8_9STRA)

HSP 1 Score: 256 bits (654), Expect = 7.260e-70
Identity = 138/282 (48.94%), Postives = 198/282 (70.21%), Query Frame = 0
Query:   19 CKSCRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSE-SGGSSNVVGQFVSGDKGRPSGGGAGRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRL 299
            C +C S NIE    +G+  C  CGV+ +EN IVS ++F E +GGSS++VGQFVS    R +  G GRG G +G SRDSRETT+ NG+++I +V  +LRL  +  +AA RLF + V++N+VQGR+T+++VAAC+YI CRQ +   MLID SD L VNVY LG  F K  + L L+ A  I+DPA+YI RFA+ LDL  K N V +TAL+++  MKRD++ +GR+PAG+C AAL +A+R +   R  +++ + ++VC  TV  R++EFE TP++ LT+EQ N++
Sbjct:    6 CPNCGSKNIESQGAAGNCVCTECGVIVEENAIVSHMEFVEGAGGSSSMVGQFVSATS-RKAYTGGGRGAGNYGFSRDSRETTLANGRRRIQEVASRLRLGGHYVDAAHRLFTIAVEKNFVQGRRTIHVVAACLYISCRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLKLA--ILDPALYIYRFAAHLDLDDKANEVALTALRLVGRMKRDWIVAGRRPAGICAAALLIASRAHGFSRHSQDVTRILRVCGMTVSTRMKEFEQTPSASLTLEQFNKV 284          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: B7GD27_PHATC (B-related factor 1 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GD27_PHATC)

HSP 1 Score: 253 bits (647), Expect = 3.730e-69
Identity = 138/288 (47.92%), Postives = 197/288 (68.40%), Query Frame = 0
Query:   19 CKSCRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSE-SGGSSNVVGQFVSGDKGRPSGGGAG------RGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRL 299
            C +C ST+IE+   SG   C  CGVV +EN IVS V+F E +GG+S++VGQFVS    +   GG G          R+G SRDSRETT+ NG+++I +V  +LRL T+  +AA RLF + V++N+VQGR+T ++VAAC+YI CRQ +   MLID SD L VNVY LG  F K  + L L+  + I+DPA+YI RFA+ LDL  K NAV +TAL+++  MKRD++ +GR+PAG+C AAL +A+R +   R  +++ + ++VC  TV  R++EFE TP++ LT+EQ  ++
Sbjct:   69 CPNCGSTSIEQHDASGASVCTECGVVVEENAIVSAVEFVEGAGGASSMVGQFVSATSSKAYTGGPGGXXXXXXXXXRYGFSRDSRETTLANGRRRIQEVASRLRLGTHFVDAAHRLFTIAVERNFVQGRRTTHVVAACLYIACRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLK--LEIIDPALYIYRFAAHLDLDEKANAVSLTALRLVARMKRDWIVAGRRPAGICAAALLIASRAHGFSRHHQDVTRILRVCGWTVTNRVKEFEHTPSAALTLEQFQKV 354          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A1Z5JG53_FISSO (B-related factor 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JG53_FISSO)

HSP 1 Score: 253 bits (645), Expect = 9.310e-69
Identity = 137/285 (48.07%), Postives = 196/285 (68.77%), Query Frame = 0
Query:   15 FAPRCKSCRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSE-SGGSSNVVGQFVSGDKGRP-SGGGAGRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLN 297
            F   C +C    IE+ + SG   C  CG+V +EN IVS V+F E +GGSSN+VGQFVS    +  +G   GR   R+  S+DSRETT+ NG+++I +V  +LRL ++  +AA RLF + V++N+VQGR+T+++VAAC+YI CRQ +   MLID SD L VNVY LG  F K  + L LQ  + I+DPA+YI RFA+ LDL  K NAV MTAL+++  MKRD++ +GR+PAG+C AAL +A RV+   +   ++ + +KVC  TV  R++EFE TP+++LT++Q +
Sbjct:   32 FQLMCPNCGGKAIEQHEASGASICIECGIVVEENAIVSAVEFVEGAGGSSNMVGQFVSASSSKAYTGAAVGR---RYAFSKDSRETTLANGRRRIQEVASRLRLGSHFVDAAHRLFTIAVEKNFVQGRRTIHVVAACLYIACRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLQ--LEIIDPALYIYRFAAHLDLDEKANAVSMTALRLVARMKRDWIVAGRRPAGICAAALLIAARVHGFSKHHHDVTRILKVCGMTVTSRVREFEKTPSARLTLDQFS 311          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A1E7FX19_9STRA (B-related factor 1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX19_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.920e-68
Identity = 136/284 (47.89%), Postives = 193/284 (67.96%), Query Frame = 0
Query:   17 PRCKSCRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSES-GGSSNVVGQFVSGDKGRPSGGGAGRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRL 299
            P C +C S +IE    SG   C  CGV+ +EN IVS V+F E  GG+S++VGQFVS    R +  G GR  G +G SRDSRETT+ NG++KI +V  +LRL  +  ++A RLF + V++N+VQGR+T+++VAAC+YI CRQ +   MLID SD L VNVY LG  F K  + L L+ A  I+DPA+YI RFA+ LDL  + N V +TAL+++  MKRD++  GR+PAG+C AAL +A R +   R  +++ + ++VC  TV  R++EFE TP++ LT++Q  R+
Sbjct:    8 PVCPNCGSKHIELQGASGASVCTECGVILEENAIVSNVEFVEGQGGASSMVGQFVSATS-RKAYTGGGRAGGNYGFSRDSRETTLANGRRKIQEVASRLRLGGHYVDSAHRLFTIAVEKNFVQGRRTIHVVAACLYISCRQEKSQHMLIDFSDALQVNVYTLGTCFLKFRRLLGLKLA--ILDPALYIYRFAAHLDLNDQANLVALTALRLVGRMKRDWIVCGRRPAGICAAALLIAARAHGFSRHPQDVTRILRVCGMTVTTRVREFEQTPSASLTLQQFGRV 288          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A7S3ZRV4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRV4_9STRA)

HSP 1 Score: 248 bits (634), Expect = 9.330e-68
Identity = 136/286 (47.55%), Postives = 198/286 (69.23%), Query Frame = 0
Query:   18 RCKS--CRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSESGGSSNVVGQFVSGDKGRPSGG-GAG---RGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLN 297
            RC +  CRST+I+ +++SGD  C  CG V +E+ IV++V+F+E  G S VVGQFVS    +P G  GA     GR ++G  R SRETT+  GK+KI QV   LRL  +  + A R+F L  Q+N+ QGRKT+++V AC+Y++CR+ +   ML+D SD L VNVY LG TF K  + LNL+  +P+VDP++YI RFA+KL+LG   +AV  TALK++  MKRD++ +GR+PAGVC AAL ++ R +   R+++++  A++VC  TV KRL +F+ATP +QLT+ + +
Sbjct:    5 RCSNPECRSTDIDWNESSGDAVCVRCGTVCEESTIVASVEFTEGAGGSGVVGQFVSAQCTKPFGTLGANYGSSGRPKYGFLRSSRETTLAAGKRKIEQVANSLRLGQHYVDGADRIFKLAAQRNFTQGRKTLHVVCACLYVMCRREKSAHMLVDFSDVLQVNVYSLGATFLKFRRVLNLE--LPLVDPSLYIHRFAAKLELGDAASAVGATALKVVQRMKRDWIETGRRPAGVCAAALLVSARAHGFHRTQQDVVSALRVCGMTVSKRLADFQATPAAQLTLREFH 288          
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Match: A0A7S4BVT8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BVT8_CHRCT)

HSP 1 Score: 241 bits (616), Expect = 6.970e-67
Identity = 131/284 (46.13%), Postives = 185/284 (65.14%), Query Frame = 0
Query:   17 PRCKSCRSTNIEEDQTSGDRACQNCGVVQQENGIVSTVQFSE-SGGSSNVVGQFVSGDKGRPSGGGAGRGRGRFGHSRDSRETTIQNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACVYIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPAMYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRL 299
            P C  C  T+IE D + GD  C  CG V +EN IV+ V F++ +GG S+VVGQFVS   GR  G          G +R+SRE    NG++ I Q+   LRL  +  EAA RLF L VQ N++QGRKT +++AAC+Y VCR+ +   +LID SD L  NVY+LG  F K  + L+L   +PI+DP++YI RFASKL+ G +T+ V M+AL+++  MKRD++ +GR+P+G+C AAL +A RV+   R++ E+ + V++CD T+RKRL EF  T    LT +QL  +
Sbjct:    2 PVCSQCGGTDIEIDASRGDAVCIQCGNVLEENTIVNEVTFAQDAGGGSSVVGQFVSATPGRNVG---------LGFNRESREVAFANGQRHISQLAAALRLADHHQEAANRLFHLAVQHNFIQGRKTQHVIAACLYTVCRREKTAHLLIDYSDVLQTNVYLLGSCFLKFTRILSL--TLPIIDPSLYIHRFASKLEFGDRTHLVSMSALRLVQRMKRDWIQTGRRPSGICGAALLIAARVHGFRRTQREVVRVVRICDVTLRKRLDEFSDTAVGVLTAQQLETI 274          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6K7_9PHAE5.290e-20960.93TFIIB-type domain-containing protein n=2 Tax=Ectoc... [more]
A0A7R9U6Q5_9STRA4.060e-7450.89B-related factor 1 (Fragment) n=1 Tax=Pinguiococcu... [more]
A0A7S2B4G7_9STRA7.760e-7147.42Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2RQN0_9STRA2.540e-7049.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448Z1B8_9STRA7.260e-7048.94B-related factor 1 n=1 Tax=Pseudo-nitzschia multis... [more]
B7GD27_PHATC3.730e-6947.92B-related factor 1 n=1 Tax=Phaeodactylum tricornut... [more]
A0A1Z5JG53_FISSO9.310e-6948.07B-related factor 1 n=2 Tax=Fistulifera solaris Tax... [more]
A0A1E7FX19_9STRA1.920e-6847.89B-related factor 1 n=1 Tax=Fragilariopsis cylindru... [more]
A0A7S3ZRV4_9STRA9.330e-6847.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4BVT8_CHRCT6.970e-6746.13Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 532..570
NoneNo IPR availableGENE3D2.20.25.10coord: 16..54
e-value: 6.1E-7
score: 30.6
NoneNo IPR availableGENE3D1.10.472.10coord: 92..193
e-value: 3.4E-26
score: 93.2
NoneNo IPR availableGENE3D1.10.472.10coord: 198..291
e-value: 5.1E-20
score: 73.5
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 16..60
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 147..166
score: 43.0
coord: 173..188
score: 21.67
coord: 239..255
score: 32.94
coord: 31..51
score: 31.75
coord: 271..285
score: 28.89
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 18..642
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 201..285
e-value: 0.19
score: 18.0
coord: 105..186
e-value: 0.44
score: 14.4
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 113..175
e-value: 3.1E-13
score: 49.6
coord: 203..276
e-value: 6.7E-10
score: 38.9
IPR029529Transcription factor IIIB subunit Brf1PANTHERPTHR11618:SF4TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNITcoord: 18..642
IPR013137Zinc finger, TFIIB-typePROSITEPS51134ZF_TFIIBcoord: 15..46
score: 8.141
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 196..290
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 104..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2586593..2598318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1889.1mRNA_P-fluviatile_contig13.1889.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig13 2586593..2598359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig13.1889.1 ID=prot_P-fluviatile_contig13.1889.1|Name=mRNA_P-fluviatile_contig13.1889.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1123bp
MAFNFDPSSSKRAPFAPRCKSCRSTNIEEDQTSGDRACQNCGVVQQENGI
VSTVQFSESGGSSNVVGQFVSGDKGRPSGGGAGRGRGRFGHSRDSRETTI
QNGKKKIIQVLGQLRLRTNLAEAAGRLFALCVQQNYVQGRKTMNIVAACV
YIVCRQRRMPIMLIDISDKLAVNVYVLGKTFQKLIKHLNLQHAVPIVDPA
MYIKRFASKLDLGSKTNAVCMTALKIIMSMKRDFLASGRQPAGVCCAALT
LATRVNRIERSKEEIRKAVKVCDATVRKRLQEFEATPTSQLTVEQLNRLP
QSGASLGLDDDIGGAAAAAGFSGEAGAAGNVAGTSGAAGAAAFAGASILV
GNAPMDPPCYIENRIKDGRLKLPPWLEPPPPPLGNYDGKVGRGKGAHGRK
KTATGAGNVRPRVVARKHAAKGGQEARTSSKMEPPKRRVGGGGGVSGRYE
DDDGEEEEEEEGEEEEEEPRKTRVLPKRKAAAAAAAAAAAAAVKTSGKSS
ADEDTEDDDELGGVGDEDDDSEYSSDGDDSEHERAAAGSREEEEEEEEEE
EEEEEEEEEEEEEADDDDDDDDEEVVDEELVRLSSKMNVDANTEEGREAL
TRHVLHVRSSQDGGASRARSRAKRRKVQNSVYSCIENMLDEDEARGLCVD
SEAGGGDSNSSSSSIASATAAAGEEATGKGGVSTAGGSATSKVSACLAAY
LPSRLRSMITSSRQAEASASDRVYGKDREGGGAREDGDGDGGVADDDLEW
GVYLRTEEDSDRTKKEWEKEHQAWEEDQVDQSRSPPPSARSNSPETAQRK
RKHTLSSSRNRGASTFRDALFAEAGKGRSGKINHAALELLMKPDGSLRQD
NDAMEEVFEDNLAPPAKAKDGKGFGAARVKSRLTASLSSPSPSSTQAMAS
TFAGAAVLPPARRLKNTAGKGAGAEGSAAPAHVGGGGGGGGGRGGGAKGH
GVAAGSVAVKAPVKEPWRRAGPDDGGQQAALDALAAMMGGVDAGLGGVGG
GSVAPSGAGVGADATGELADSPSVWGKHGGSARARGGADACTKAAAVAAV
TAAAAPETIETMEDIEEEEVAPEAAAVAAAVEEEEEEEEEDDDDDDDDDE
GRGRHPMYGEVDDDDDPYGEEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013763Cyclin-like
IPR013150TFIIB_cyclin
IPR029529Brf1
IPR013137Znf_TFIIB
IPR036915Cyclin-like_sf