mRNA_P-fluviatile_contig13.1800.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: D7FPJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ0_ECTSI) HSP 1 Score: 158 bits (400), Expect = 2.280e-47 Identity = 102/141 (72.34%), Postives = 106/141 (75.18%), Query Frame = 1
Query: 1 MPRSRRSAPARXXXXXXXXXXXXAPPSQPPAQHQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQSHEPAAAQTYQQPASDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKTYN 423
M RSRRSAPAR XXXXXXXXXX SGGGGML+GMASTMAQGFAFGTGSSIAHRAVG++MG Q P Q YQQP DPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKK+YN
Sbjct: 1 MGRSRRSAPARRPXXXXXXXXXXXXXXX--XXXXXSGGGGMLAGMASTMAQGFAFGTGSSIAHRAVGAVMGGGGSSAPVEQAQEQAP---QAYQQPPVDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKSYN 136
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A4D9CYI4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYI4_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.540e-25 Identity = 59/117 (50.43%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 79 SQPPAQHQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQ---SHEPAAAQTYQQPASD---PCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAK 411
S PPA HQ GGGM+SG AST+AQGFAFGTGS++AHRAVG+ G Q + +PA Q Y PA PC +D QNF CLQ N +V AC F++E+LQ CQ +A+
Sbjct: 32 SAPPAPHQPQQGGGMMSGFASTIAQGFAFGTGSAVAHRAVGAAAGAFSGDSEAPHQQEAYAQQPAHQQQYAAPAQGGQGPCALDGQNFQACLQANPGNVDACTFLYESLQQCQRQAQ 148
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A7R9VMR5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VMR5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 7.440e-22 Identity = 56/111 (50.45%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 85 PPAQHQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQSHEPAAA------QTYQQPASDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 399
PPAQ QSGGGGM+SG+ ST+AQG AFGTGS+IAHRAVG++ G S AA Q Q + PCD DKQ F +CLQ N D +C+F+++ LQTCQ
Sbjct: 38 PPAQ--QSGGGGMMSGIGSTIAQGMAFGTGSAIAHRAVGAVAGSFGGGGEEAPQDSVAGAAPADAYGQQQQMQQMAGPCDQDKQMFFECLQMNKGDQESCRFLYDTLQTCQ 146
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: H3G8I8_PHYRM (CHCH domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3G8I8_PHYRM) HSP 1 Score: 94.0 bits (232), Expect = 1.030e-21 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 112 GGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQSHEPAAA--QTYQQPASDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKTY 420
GGGM+SG+ T+AQG AFGTGS+IAHRAVG++ G Q PAA QT Q P + C D+++F +CL NN+ND+++CQF + + CQM+ + T+
Sbjct: 48 GGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSFSGGSDAPQEQEAAPAAQDHQTAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQMQQQSTF 152
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A7S2PCQ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCQ3_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.030e-21 Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 76 PSQPPAQHQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQSHEPAAAQTYQQPA-SDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 399
P+ PA QQS GGGM+SG+AST+AQG AFGTGS+IAHRAVG++ G + QQP + C DKQ F +CLQ N D ++CQF+++AL+TCQ
Sbjct: 22 PASTPAPAQQSSGGGMMSGLASTVAQGMAFGTGSAIAHRAVGAVAGSFGGSGGDAEIPAQTSQQMGYEQQPTLASACADDKQMFYECLQMNKGDQSSCQFLYDALKTCQ 130
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A7S2CIA8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIA8_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 9.270e-21 Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 112 GGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQSHEPAAAQTYQQPASD--PCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKK 414
GGGM+SG+ T+AQG AFGTGS+IAHRAVG++ G +PA AQ QQP S C+ D++NF CLQ+N+ DV +C F+ LQ CQ +AK+
Sbjct: 60 GGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMMGG------NEEQPAVAQASQQPQSSIQSCEYDQKNFYDCLQSNHGDVNSCDMYFQQLQACQAQAKQ 156
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A7S1XNA6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNA6_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.620e-20 Identity = 53/113 (46.90%), Postives = 68/113 (60.18%), Query Frame = 1
Query: 73 PPSQPPAQHQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIM----GXXXXXXXXXXXQSHEPAAAQTYQQPASDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQ 399
P +Q PAQ QQ GG M+SG+ T+AQGFAFGTGS++AHRAVG++ G Q + QQ + + C VD+QNF QCL NN + ACQF F++LQ CQ
Sbjct: 44 PQAQVPAQPQQQSGG-MMSGLLGTVAQGFAFGTGSAVAHRAVGAVANSFSGSGEQAPAAGMEQQPQFQQQAPIQQVSQNACSVDQQNFMQCLTENNGNAQACQFFFDSLQQCQ 155
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A7S1UZU7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZU7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.470e-19 Identity = 56/127 (44.09%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 73 PPSQPPAQHQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQSHEPAAAQTY---------QQPASDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQM-EAKKTYN 423
P + PPA QQS GGG+LSG+ ST+AQG AFGTGS+IAHRAVG++ G + E A + Y Q S C DKQ F +CLQ N D +C F+++ LQTCQ E ++N
Sbjct: 10 PKAAPPAVPQQSSGGGLLSGIGSTIAQGMAFGTGSAIAHRAVGAVAGGLSGGG-----EGGEAAPVEQYGDSLNPGSPTQQLSGACAGDKQMFFECLQVNKGDQQSCSFLYDQLQTCQRNETSMSFN 131
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A3M6VLJ3_9STRA (CHCH domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLJ3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.830e-19 Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 85 PPAQHQQSGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQ--------SHEPAAAQTYQQPASDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKTY 420
P HQ S GGGM+SG+ STMAQG AFGTGS++AHRAVG++ G X SHE A Q P + C VD++ F +CL +N+ND+++CQF + + CQ+ + +
Sbjct: 38 PAPAHQSSSGGGMMSGLMSTMAQGMAFGTGSAVAHRAVGAVAGSFSSSLDAPQXXXXXXXXXASHEAA-----QPPQQNQCGVDQKAFLECLNSNSNDISSCQFFLDRFKECQLHQESAF 152
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Match: A0A421EVM3_9STRA (CHCH domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EVM3_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.320e-19 Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 106 SGGGGMLSGMASTMAQGFAFGTGSSIAHRAVGSIMGXXXXXXXXXXXQSHEPAAA--QTYQQPASDPCDVDKQNFGQCLQNNNNDVTACQFVFEALQTCQMEAKKTY 420
S GGGM+SG+ T+AQG AFGTGS+IAHRAVG++ G Q PA Q Q P + C D+++F +CL NN+ND+++CQF + + CQ++ + ++
Sbjct: 41 SSGGGMMSGLMGTVAQGMAFGTGSAIAHRAVGAVAGSMSGGSDAPQQQEAAPAQQDYQAAQPPQQNQCGADQKSFLECLNNNSNDISSCQFYLDQFKQCQLQQQSSF 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1800.1 >prot_P-fluviatile_contig13.1800.1 ID=prot_P-fluviatile_contig13.1800.1|Name=mRNA_P-fluviatile_contig13.1800.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=142bp MPRSRRSAPARRAAPSRSAPPARAPPSQPPAQHQQSGGGGMLSGMASTMAback to top mRNA from alignment at P-fluviatile_contig13:1765665..1768563- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1800.1 ID=mRNA_P-fluviatile_contig13.1800.1|Name=mRNA_P-fluviatile_contig13.1800.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2899bp|location=Sequence derived from alignment at P-fluviatile_contig13:1765665..1768563- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1765665..1768563- >mRNA_P-fluviatile_contig13.1800.1 ID=mRNA_P-fluviatile_contig13.1800.1|Name=mRNA_P-fluviatile_contig13.1800.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=852bp|location=Sequence derived from alignment at P-fluviatile_contig13:1765665..1768563- (Porterinema fluviatile SAG_2381)back to top |