mRNA_P-fluviatile_contig13.1791.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1791.1
Unique NamemRNA_P-fluviatile_contig13.1791.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A0A6H5JIK9_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK9_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 4.160e-145
Identity = 223/302 (73.84%), Postives = 248/302 (82.12%), Query Frame = 2
Query:  227 AAENVTGVKAKVLQLAAVMDRGGMANPG---ISNAYLGSKDEMRLLVESLADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAI------------------GGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEVVELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            A+++V  VK+KVLQLAA MDRGGMANPG   +S+AYLG+KD+MRLLVESLA L PV+KPLT  ELSGRWELVYTTVELFRASPFFQMVEA YDDPEKSNLFFKLHQLQTGSWGAS IGR+TQTLDLI+ VPPS +   ++  +T A+ + A  AGA+                   GSLESEVDLIILPLTS+PLVGFWKL+PTFGGCIATKAKC L GD NEVV+L+VESTKLKAVEDVPLLP+AGPLFEG EFPTGEV KK     VMGNVPVT+QTVVYIDD +RVMEDKAGELYIYAR
Sbjct:   10 ASDSVAEVKSKVLQLAASMDRGGMANPGNRGVSHAYLGTKDDMRLLVESLAQLDPVNKPLTATELSGRWELVYTTVELFRASPFFQMVEAGYDDPEKSNLFFKLHQLQTGSWGASKIGRVTQTLDLIDSVPPSIEG--RDATATPAAEAEAAAAGAVEGSDKAGVVEDNTDMSGGSGSLESEVDLIILPLTSVPLVGFWKLLPTFGGCIATKAKCSLAGDNNEVVQLIVESTKLKAVEDVPLLPIAGPLFEGMEFPTGEVTKK-----VMGNVPVTKQTVVYIDDTLRVMEDKAGELYIYAR 304          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A0A0G4EA07_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA07_VITBC)

HSP 1 Score: 186 bits (472), Expect = 2.150e-52
Identity = 107/275 (38.91%), Postives = 158/275 (57.45%), Query Frame = 2
Query:  248 VKAKVLQLAAVMDRGGMANPGISNAYLGSKDEMRLLVESLADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEVVELVVESTKLKAVEDVPLLPLAGP-LFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            +K ++LQLAA  DRG  A           K+++  +V+ L+   P     +P  L+G W LVY + +LFR+SPFF  ++A+YDD +K++LFFKLH+LQT SWG S I ++ QTL                         + P A +  G L S+ ++ +LP T +PLVG+WKL+PTFGG + + A   + GD N+ ++L V+ TK+KA ED+PL+PL G  L E T      V K+ R     G+VP  R T V++D  MR+ +D  GE+++Y R
Sbjct:   60 LKMRLLQLAASTDRGQQATKR-------QKEQISNVVDDLSSRGPFD--CSPGMLNGSWVLVYASAQLFRSSPFFLSIQASYDDSKKASLFFKLHELQTRSWGFSEIAQVGQTL-------------------------LFPEANSTDGRLRSDFNIKVLPSTVVPLVGWWKLLPTFGGNVRSIANASISGDANQHLDLTVDLTKVKASEDLPLMPLLGQFLAEQTGIRVSNVWKRLR-----GSVPTARVTHVFVDSGMRIAKDSQGEVFVYVR 295          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A0A4D9CZF7_9STRA (PAP_fibrillin domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZF7_9STRA)

HSP 1 Score: 164 bits (415), Expect = 9.390e-45
Identity = 103/282 (36.52%), Postives = 150/282 (53.19%), Query Frame = 2
Query:  227 AAENVTGVKAKVLQLAAVMDRGGMANPGISNA--YLGSKDEMRLLVESL-ADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEV----VELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGE 1051
            +  +V  +K KV QLAA+ DRG + +P +S+   Y   ++ M  L+E L A  +   + ++P  L G WELVY+T +LFR+SPFFQ +E AY DP KS LFFKLH+LQT SWGAS IGR+ QT+DL                                 +L S  D ++ PLT++PL+G++KL+PTFGG + + A      +  +     +E  V  T  K +  +  +PL G   E  +FPT E A         G+ P     VVY+D++ R++ +  GE
Sbjct:    9 SGSSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQ------------------------------TLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVLSLADGLTVSESAQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKE-AWNLLPWNWSGSGPRCLVEVVYLDEDFRIVREGGGE 259          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A0A061RCL2_9CHLO (Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCL2_9CHLO)

HSP 1 Score: 165 bits (417), Expect = 1.290e-44
Identity = 101/312 (32.37%), Postives = 160/312 (51.28%), Query Frame = 2
Query:  143 LGRGHVSIGWGDQIGTGQRRQKIGMTMEAAENVTGVKAKVLQLAAVMDRGGMANPGISNAYLGSKDEMRLLVESLADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEVVELVVESTKLKAVEDVP---LLPLAGPLFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            L RG +S     ++GT              +++  +K ++LQ +A +DRG + +  +S+AY G + ++  L++ L   +        + ++G WELVY+T +LFR+SPFF  ++AA+ D EKS LFFKLH LQ  SWGAS++GR+ Q +D              E N                    SE D II  LT +P+ G++KL+PTFGG + + A+      +   +++ ++ T+++A   +P    LP+ G      +FP   V K        G  P    TV Y+DD  R+MED  GEL++Y+R
Sbjct:   42 LARGKISSSLNPELGT---------IRSDRQDIQNIKLQILQHSATLDRGQLHDRLVSDAYEGKRQKILELIQELCS-RKTESRFEKSMIAGEWELVYSTCQLFRSSPFFMAIQAAFADKEKSALFFKLHDLQVKSWGASTVGRVAQNIDF-------------ESN-----------------QFRSEFDTIIFALTVVPIFGWFKLLPTFGGRVISYAEDLEFDIETGRLDMELKRTRVEAAPGIPNIKKLPVLGRALMDNDFPVSRVWKSLPWNG--GRAPKCSVTVKYVDDTFRIMEDPDGELFVYSR 311          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A0A7S4HG07_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HG07_9EUKA)

HSP 1 Score: 163 bits (413), Expect = 4.090e-44
Identity = 111/298 (37.25%), Postives = 154/298 (51.68%), Query Frame = 2
Query:  221 MEAAENVTGVKAKVLQLAAVMDRGGMANPGISNAYLGSKDEMRLLVESLADLQPVHKPLTPA--ELSGRWELVYTTVE--LFRASPFFQMVEAAYDD---PEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEVVELVVESTKLKAVEDVP-LLPLAGPL-------FEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            M A    T +K +VLQLAA +DRG   NP  S+AY      M ++ E L +L     PL  +  EL G WELV+T V+  +FR+SPFF  ++ AY     PEK+ LFF+LH+LQT SWGAS IGR+ QT+D  E                              G L SE D  +L LT++P++GFWKL+PTFGGC+ T +   L+GD+   + + V+ T  + V+ +  L P  G +           E P G V K     P     P     + Y D + R++ D +GEL++YAR
Sbjct:   43 MVATSVNTQLKLEVLQLAAALDRGQSYNPTSSDAY---SQRMAIVTEKLEELIAQSPPLPTSLEELDGEWELVFTNVKHGIFRSSPFFLAIQEAYASAGVPEKAELFFRLHELQTCSWGASKIGRVAQTIDASE------------------------------GMLYSEFDTNLLSLTAIPVLGFWKLLPTFGGCVVTASSAALEGDR---INMEVKYTTSRKVDGLSGLRPWFGEIGLKIADAIWKLEVPVGAVWKLL---PWNKGPPTCSVELKYFDGDFRIVADGSGELFVYAR 301          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: W7T369_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T369_9STRA)

HSP 1 Score: 163 bits (413), Expect = 9.290e-44
Identity = 103/279 (36.92%), Postives = 149/279 (53.41%), Query Frame = 2
Query:  236 NVTGVKAKVLQLAAVMDRGGMANPGISNA--YLGSKDEMRLLVESL-ADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEV----VELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGE 1051
            +V  +K KV QLAA+ DRG + +P +S+   Y   ++ M  L+E L A  +   + ++P  L G WELVY+T +LFR+SPFFQ +E AY DP KS LFFKLH+LQT SWGAS IGR+ QT+DL                                 +L S  D ++ PLT++PL+G++KL+PTFGG + + A      + ++     +E  V  T  K +  +  +PL G   E  +FPT E A         G  P     VVY+D++ R++ +  GE
Sbjct:   83 SVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQ------------------------------TLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKE-AWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGE 330          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: B9P2A1_PROMR (Putative Gram-negative pili assembly chaperone n=1 Tax=Prochlorococcus marinus str. MIT 9202 TaxID=93058 RepID=B9P2A1_PROMR)

HSP 1 Score: 160 bits (406), Expect = 1.010e-43
Identity = 102/274 (37.23%), Postives = 149/274 (54.38%), Query Frame = 2
Query:  248 VKAKVLQLAAVMDRGGMANPGISNAYLGSKDEMRLLVESLADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEVVELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            +K+ + +++AV DRG   N  IS  Y    +EM  L+E+L D       ++   LSG WEL+++ VELFR+SPFF  +E A +D  KSNLFFKLHQLQ GS+G S+IGRI Q +D  +          KE  ST                     D  I  LT++P++G++KL+PTFGG + T A   +   KN V+++ ++ TK+  V+ +  +P    L     FP  EV  K    P     P  + TV+Y+D+ MR+M+D  G ++IY R
Sbjct:    7 IKSNIYKISAVTDRGQRLNKLISPIYEEKGNEMDELIEALKDFS---FEISEKSLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDK----------KEFISTF--------------------DTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVL--KNNVLDMNLQKTKVSKVDGLNKIPFFSELLMERWFPVKEVWNKL---PWNKESPNCQVTVIYLDEEMRIMQDMYGSIFIYIR 242          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A0A7S1UDK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDK1_9STRA)

HSP 1 Score: 161 bits (407), Expect = 3.370e-43
Identity = 105/286 (36.71%), Postives = 153/286 (53.50%), Query Frame = 2
Query:  248 VKAKVLQLAAVMDRGGMANPGISNAYLGSKDEMRLLVESLADLQPVHKPLTPAELS---GRWELVYTTVE--LFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEV-----VELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAKKA--RKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            +KA++ Q+AA MDRG +     ++AY      MR  +E+L  +     P  P +LS   G WEL+YT+V+  +FR+SPFF  +E AYD+ E SNLFFKLH+LQT SWG S++GR+ Q  D    +                              + SE D  +  LT++P+VGF+KL+PTFGGC+ T++K        E+     VE+ V+ T+ K V  +P LP+ G      E P G++ +K    K P    V      +VY+DD+ R+  DK GEL++Y R
Sbjct:   67 LKARISQIAASMDRGTVRYK-YADAYTEKAAAMRQELEAL--IAHPGAPAVPTDLSALDGEWELIYTSVKHGIFRSSPFFLAIEEAYDNEELSNLFFKLHELQTCSWGVSTVGRVAQVWDSEAKM------------------------------MYSEFDTSLFGLTTIPIVGFFKLLPTFGGCVRTESKV----TSTEIGPDGRVEMEVDLTRAKEVPGLPPLPILGDRVYDIEVPVGDIWEKLPWNKGPAKCAV-----NIVYLDDDFRIAADKYGELFVYTR 310          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A2C2Q8_PROM1 (PAP_fibrillin domain-containing protein n=6 Tax=Prochlorococcus TaxID=1218 RepID=A2C2Q8_PROM1)

HSP 1 Score: 158 bits (399), Expect = 1.010e-42
Identity = 94/274 (34.31%), Postives = 145/274 (52.92%), Query Frame = 2
Query:  248 VKAKVLQLAAVMDRGGMANPGISNAYLGSKDEMRLLVESLADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEVVELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            +KA + Q+AA  DRG   N  I+  Y    +EM+ LVE   DLQP+   +T + + G WEL+Y++VELFR+SPFF  +E A +D  KS+LFFKLH LQ GS+G S++GR+ Q L+  +                              G + S  D  I  LT++P++G++KL+PTFGG + T A       KN ++ + +E TK+  V+ +  +P    +     +P   V K     P     P    +V+Y+D ++R++ D  G L++Y R
Sbjct:    7 LKALIYQVAAATDRGQRMNAMIAPMYQNKLEEMKKLVE---DLQPLSDEITQSSIEGEWELIYSSVELFRSSPFFLAIEKALNDKSKSDLFFKLHLLQVGSFGLSTVGRVGQYLNFTK------------------------------GEMISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLANKLQL--KNNILSMELEKTKVSEVDGLGKIPFVNSILMERWYPVKNVWKLL---PWNKENPNCEISVIYVDKDLRIIRDMHGALFVYIR 242          
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Match: A0A7S2Q3B1_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q3B1_9DINO)

HSP 1 Score: 157 bits (397), Expect = 1.390e-42
Identity = 95/270 (35.19%), Postives = 144/270 (53.33%), Query Frame = 2
Query:  266 QLAAVMDRGGMANPGISNAYLGSKDEMRLLVESLADLQPVHKPLTPAELSGRWELVYTTVE--LFRASPFFQMVEAAYDDPEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNSTVASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATKAKCFLKGDKNEVVELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAKKARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR 1069
            +LAA +DRG   NP   + Y    +  R L+E +    P   P + AE+ G WELV++TV+  +FR+SPFF  V+ A    ++S+LFFKLH+LQ  SWG S +GR+ Q ++  E                              G L SE D  +L LT++P++GFWKL+PTFGGC+ T +   L GD+   +++ V+ T+ + V  +P  PLAG +  G   P   + +        G  PV    + Y+D++MR++ D  GEL++Y R
Sbjct:    1 RLAAALDRGQAYNPTSGDHYAERMETARSLIEEIISEAPP-PPTSLAEIDGEWELVFSTVKHGIFRSSPFFLAVQEALGGRDQSDLFFKLHELQVMSWGISKVGRVAQYINSTE------------------------------GKLYSEFDTSLLSLTTIPIIGFWKLLPTFGGCVVTASDVGLNGDR---LDMEVQWTEAREVPGLP--PLAGAIL-GQRVPVNSIWQALPWNE--GRRPVCSVALRYLDEDMRIVADNDGELFVYTR 231          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIK9_9PHAE4.160e-14573.84PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A0G4EA07_VITBC2.150e-5238.91PAP_fibrillin domain-containing protein n=1 Tax=Vi... [more]
A0A4D9CZF7_9STRA9.390e-4536.52PAP_fibrillin domain-containing protein n=2 Tax=Na... [more]
A0A061RCL2_9CHLO1.290e-4432.37Pilus assembly protein n=1 Tax=Tetraselmis sp. GSL... [more]
A0A7S4HG07_9EUKA4.090e-4437.25Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
W7T369_9STRA9.290e-4436.92Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
B9P2A1_PROMR1.010e-4337.23Putative Gram-negative pili assembly chaperone n=1... [more]
A0A7S1UDK1_9STRA3.370e-4336.71Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A2C2Q8_PROM11.010e-4234.31PAP_fibrillin domain-containing protein n=6 Tax=Pr... [more]
A0A7S2Q3B1_9DINO1.390e-4235.19Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1690545..1694380 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.9
Seed ortholog evalue3.5e-119
Seed eggNOG ortholog2880.D8LRM1
EggNOG OGs2A2EM@1,2RXHW@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-12_000330.1
Exons7
Model size1072
Cds size1023
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1791.1prot_P-fluviatile_contig13.1791.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1690545..1694331 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815562.9294324-CDS-P-fluviatile_contig13:1690544..16906491622815562.9294324-CDS-P-fluviatile_contig13:1690544..1690649Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1690545..1690649 -
1693562261.0539532-CDS-P-fluviatile_contig13:1690544..16906491693562261.0539532-CDS-P-fluviatile_contig13:1690544..1690649Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1690545..1690649 -
1622815562.941925-CDS-P-fluviatile_contig13:1691177..16913031622815562.941925-CDS-P-fluviatile_contig13:1691177..1691303Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1691178..1691303 -
1693562261.0648198-CDS-P-fluviatile_contig13:1691177..16913031693562261.0648198-CDS-P-fluviatile_contig13:1691177..1691303Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1691178..1691303 -
1622815562.9530265-CDS-P-fluviatile_contig13:1691668..16918001622815562.9530265-CDS-P-fluviatile_contig13:1691668..1691800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1691669..1691800 -
1693562261.0735824-CDS-P-fluviatile_contig13:1691668..16918001693562261.0735824-CDS-P-fluviatile_contig13:1691668..1691800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1691669..1691800 -
1622815562.9648993-CDS-P-fluviatile_contig13:1692461..16925871622815562.9648993-CDS-P-fluviatile_contig13:1692461..1692587Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1692462..1692587 -
1693562261.0826719-CDS-P-fluviatile_contig13:1692461..16925871693562261.0826719-CDS-P-fluviatile_contig13:1692461..1692587Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1692462..1692587 -
1622815562.9753888-CDS-P-fluviatile_contig13:1693008..16931131622815562.9753888-CDS-P-fluviatile_contig13:1693008..1693113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1693009..1693113 -
1693562261.091491-CDS-P-fluviatile_contig13:1693008..16931131693562261.091491-CDS-P-fluviatile_contig13:1693008..1693113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1693009..1693113 -
1622815562.9932132-CDS-P-fluviatile_contig13:1693412..16935821622815562.9932132-CDS-P-fluviatile_contig13:1693412..1693582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1693413..1693582 -
1693562261.0993927-CDS-P-fluviatile_contig13:1693412..16935821693562261.0993927-CDS-P-fluviatile_contig13:1693412..1693582Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1693413..1693582 -
1622815563.0061367-CDS-P-fluviatile_contig13:1694072..16943311622815563.0061367-CDS-P-fluviatile_contig13:1694072..1694331Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1694073..1694331 -
1693562261.1068735-CDS-P-fluviatile_contig13:1694072..16943311693562261.1068735-CDS-P-fluviatile_contig13:1694072..1694331Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1694073..1694331 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815563.0164297-UTR-P-fluviatile_contig13:1694331..16943801622815563.0164297-UTR-P-fluviatile_contig13:1694331..1694380Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1694332..1694380 -
1693562261.1201484-UTR-P-fluviatile_contig13:1694331..16943801693562261.1201484-UTR-P-fluviatile_contig13:1694331..1694380Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1694332..1694380 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1791.1

>prot_P-fluviatile_contig13.1791.1 ID=prot_P-fluviatile_contig13.1791.1|Name=mRNA_P-fluviatile_contig13.1791.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=341bp
MTPFMIAVSSLALLGLFPQRNTDAFVPTSPPLGRGHVSIGWGDQIGTGQR
RQKIGMTMEAAENVTGVKAKVLQLAAVMDRGGMANPGISNAYLGSKDEMR
LLVESLADLQPVHKPLTPAELSGRWELVYTTVELFRASPFFQMVEAAYDD
PEKSNLFFKLHQLQTGSWGASSIGRITQTLDLIEPVPPSADAAAKEGNST
VASNSIAPTAGAIGGSLESEVDLIILPLTSLPLVGFWKLIPTFGGCIATK
AKCFLKGDKNEVVELVVESTKLKAVEDVPLLPLAGPLFEGTEFPTGEVAK
KARKKPVMGNVPVTRQTVVYIDDNMRVMEDKAGELYIYAR*
back to top

mRNA from alignment at P-fluviatile_contig13:1690545..1694380-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1791.1 ID=mRNA_P-fluviatile_contig13.1791.1|Name=mRNA_P-fluviatile_contig13.1791.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3836bp|location=Sequence derived from alignment at P-fluviatile_contig13:1690545..1694380- (Porterinema fluviatile SAG_2381)
TCCTCGGCTAGGGACTCGCTGACTCGTCGATCGATTGCCGCGTCGTGTGA TGACTCCTTTTATGATTGCGGTTTCATCGCTCGCTCTGCTGGGACTTTTT CCACAACGAAATACGGACGCCTTTGTTCCTACGTCACCGCCGTTGGGGCG TGGTCATGTTTCCATCGGGTGGGGCGACCAGATCGGGACGGGACAGCGGC GGCAGAAGATTGGCATGACGATGGAGGCAGCCGAGAACGTTACGGGCGTC AAGGCAAAGGTGCTGCAGCTGGCGGCGGTGATGGATAGAGGCGGCATGGC GAACCCAGGTGATATCTCGTTCGAAAGTCCGCTCCCGGCCTGCGAGAGCG CAGAGATCTGTTTTCGCCGCGTCATGACTTACCTTTGGCGTCTGACTGGG CACCCGAGCAGGGTACAGCAGTTTTGTTGCTCAAACGCCACCAACTGACT GCTTATAATCCATACATCATCGTCATCCCCCCATGCCATTCGACCCCTGC TACGTTTCGCAGTCCCACCTACAACATGTCGTTGTTTAGTGTGTGTTCAG ACCATGACGGTGTTGAGGTGTTTGATAAAGGCTTATCCATTTGACTACTC AGCCAGCGCTGACTGAGTCGTCAAATGGATAAGCCATTACCAAGGAAAAG ATATGTCTCTTCACGAGCCGAGAGACAGGGGGTTGCTGCTTCTAAACTCT TCTTGTGTTTCACCTCCCCATGTACGAAGGACAAGTGTGCCCCGTCGGAA TCCTGGATTAGCTTACTGCCTCCCACTCGTGTCTTGGTACCAATTCAGGG ATATCGAATGCATACCTGGGCAGCAAAGACGAAATGCGACTTCTTGTGGA ATCGTTGGCCGATTTGCAACCCGTGCACAAGCCCCTCACTCCCGCGGAAC TGAGCGGTCGCTGGGAGCTGGTGTACACCACGGTTGAGCTCTTCCGCGCC TCCCCCTTCTTTCAGATGGTGAGAGCGAAGAAGGACGATAAGAGGATGCA ACGCACGGGGCGGGGGGGAGGAGGGCGTCGAGGCCAAAGACCCGCGGCTG AGACATCTTCAGGGACCTCCCCTAAACAAGACCATGGAAAATCGAGGCAG TGGGGGGAGGGGTGAGGGGCAAGCCCATCCAGAAATATTTTGATGCACAT GCACTTGCCACAGACCAATCACGACTCCACCGTCAGCACATTTTCAACCT CCAGCCTTGTATGTTCATTTTCAAACGAACCGTTCCCGAATCGTTCCTCG CCGTACCCCTGGGCCAGGTTGAGGCTGCATACGACGATCCGGAAAAGTCG AACCTGTTCTTCAAGCTACACCAGTTGCAAACGGGCTCGTGGGGCGCAAG CTCCATTGGCAGAATCACGCAGGTGATGGCGCTGGACAAGGGAATCTATA GGCCGGACCGTGTGGCATTTTGTAATTTTGGGGGTTGGCAAGAGTGTCCA AGCCTCAAACAAATTGCGCTATCCCGTGAGCACATCCGCCGTTGTTTCAG CCCATCATGCTTATCCCGTGTACTTCGGTTGTTATTTGAGTTCACCCGAT GTTCCCAACTTCGATGACCTGTGGGACGCGCCCTTGATCGCTTAGGGTGT GGCGTTTGTGTCCCATCACCTGTTGCCGTGATCCAACCCTGCATCATTGT TCCGTTGGAAGGCGATGATGACGATTCGCACTTGCGTACTTACACTTTCC GCTGTACCGGGCCCCACGTCCCCAATACACTCTCCCCCTTCCGCTTGAAA ATGTTTGCTTGTTTATCTTCCCGATATCTGTGCACCGTTGCAGACCTTGG ACCTGATCGAACCGGTCCCGCCCAGCGCAGACGCAGCGGCGAAGGAGGGA AACTCGACGGTCGCGTCAAACTCGATAGCACCGACGGCCGGCGCAATCGG CGGGTCCTTGGAGTCGGAAGTGAGATGATATGGGATTTCCGGGAGTGCTG CAGCAGCCAGATTTTCTGTGTTTCTACGTCAGTTTCGTTTGTGCGCTGCG GCGGGGGGTTTTCGCCTGCATGCCGCAACTCCTGACTTCTGAGAGTACCC GCCAGCATACTCTCGAGCTGTTGAAAAGTGCTCGGTTAAGCGGGCTTAGG GTTAGGATATGTCCCACGCGTGCCGAAGTACACAAAGTCGTCCAACATGT CTTGGTCATCTCCATATGTTGACGAAGGGGGGAAGGCGCGTCCTATCTTG ACTTATTGCTCTGGATGAATGGCTTTTCTCGTGGTGACCGTAACCCCCCG CTCTCCTTGATTCGTCTTTCTGCTGCAACATCGGAACATTCGCCGAAAAC GTGGCGGCGTCGTCAAGCCGTGAAGCGGCCGCGTGGCACAGCAGTTGTAG TCGACCCAAAAGATCGAAATCACTTATCGAACGTGCGCATGCACGAACTC GTGGAGCCCGAGCTGCAGGGTAGCCGTGTCGTTGAGATCATCCCAGGACG CCCGCCTTGTTCTCCGCCTTCGGGAGAACCATATGCCTGTTTCTCGTCTC CCCCGGGTGCGATGCCTTATTGCCGCATCGCTTCCTCTTCCGTTTCTCTG TGGAAATGTTCGCAAACGACGCGGCGCCAGGTTGACTTGATCATCCTGCC CCTCACGTCGCTGCCTCTAGTGGGTTTCTGGAAGCTCATCCCGACGTTCG GGGGTTGCATCGCGACAAAGGCGAAGTGCTTCCTGAAGGGGGATAAAAAC GAAGTTGTAGAGGTGTGTGCTGCCGACGCGCGTGGAACGTTCAAGGTTTG GGTGTGGGGTGGGTGCGGTTGAATGGCTTGTATCGTCTGATTTCGGGCGT AGAACTCGTTGGGGAGTGAGGACGGCAGGGGAGCAGCGCTTGGGCTCCAT GCACGTGCCGATTTGACGTGTTCTTGTTCGGTTGTGCGTTGGGAGTGTGC AACTTTGTTGTGTGACTTCGGCACTTGAGCCAGACCATTTTCATGTAGCG TGTGTTATGCGTCGCCGGATCTGCGTCGACCGCACTGTGCACGTTCATTC GCTCGCGCGCCGTTGTCCTCTGTGTGCCCTTTGCCTCTGCCCCACCTCCC GTGCGCGCCCTCCAACGGGAATTCTAGCTGGTCGTGGAGTCGACGAAGCT CAAGGCGGTCGAGGACGTACCATTGCTCCCGCTTGCAGGGCCGCTGTTCG AGGGTACGGAGTTCCCAACCGGGGAGGTCGCAAAGAAGGCGAGAAAGAAG CCTGTGTTGCATGGTTCCACAATTCTGAACAGAATCGCTGTTGACCGCTT TGCGTTGCCGAGAAATAAGTGGACGATGTTGAGGTACGGGTCGAACCGAC GGGGCGTCCCGTCGTGCGGTGGTGTGCGTGACAAGCTTGTAGCTTGGAAA TTCGCCGAAAAGGCATCGAGGGTACCGCTCTGATTCTTGCGTCAGTCGAT CGTGGTGCCACCACTTTGTCCGACGAAACTGTGCCCGCACCCGTTTTGTC TTGCCCCCAGCTGGTTTGTTGGTTTGGTTTGTTGGCGTGGGAACGCTGAA GGTGGGTCAGTCTTGATGTAGTTCAATTGCTACTGCTTCATGCCGCTGGT GGTGGTCGATGTTGATGGGCGCTGCTGACGATAAAACGGACGTCGGATGT GGGTGATAGGTAAGTGGCTACGAAATGCTGCTTCACTTCTTGTGGGCGCC AAACCTTGTTCCGGCGCTGATGAAGCAGTTGTCGTTTGGACTGCTCGTGA TCCCGTGGTACCGTTCCATGTGGTACCGCAGGTCATGGGAAATGTGCCGG TCACGAGGCAGACGGTCGTGTACATCGACGACAACATGCGGGTCATGGAA GACAAGGCCGGCGAGCTCTACATCTACGCCAGGTGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig13:1690545..1694380-

>mRNA_P-fluviatile_contig13.1791.1 ID=mRNA_P-fluviatile_contig13.1791.1|Name=mRNA_P-fluviatile_contig13.1791.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2046bp|location=Sequence derived from alignment at P-fluviatile_contig13:1690545..1694380- (Porterinema fluviatile SAG_2381)
ATGACTCCTTTTATGATTGCGGTTTCATCGCTCGCTCTGCTGGGACTTTT
TCCACAACGAAATACGGACGCCTTTGTTCCTACGTCACCGCCGTTGGGGC
GTGGTCATGTTTCCATCGGGTGGGGCGACCAGATCGGGACGGGACAGCGG
CGGCAGAAGATTGGCATGACGATGGAGGCAGCCGAGAACGTTACGGGCGT
CAAGGCAAAGGTGCTGCAGCTGGCGGCGGTGATGGATAGAGGCGGCATGG
CGAACCCAGATGACTCCTTTTATGATTGCGGTTTCATCGCTCGCTCTGCT
GGGACTTTTTCCACAACGAAATACGGACGCCTTTGTTCCTACGTCACCGC
CGTTGGGGCGTGGTCATGTTTCCATCGGGTGGGGCGACCAGATCGGGACG
GGACAGCGGCGGCAGAAGATTGGCATGACGATGGAGGCAGCCGAGAACGT
TACGGGCGTCAAGGCAAAGGTGCTGCAGCTGGCGGCGGTGATGGATAGAG
GCGGCATGGCGAACCCAGGGATATCGAATGCATACCTGGGCAGCAAAGAC
GAAATGCGACTTCTTGTGGAATCGTTGGCCGATTTGCAACCCGTGCACAA
GCCCCTCACTCCCGCGGAACTGAGCGGTCGCTGGGAGCTGGTGTACACCA
CGGTTGAGCTCTTCCGCGCCTCCCCCTTCTTTCAGATGGGATATCGAATG
CATACCTGGGCAGCAAAGACGAAATGCGACTTCTTGTGGAATCGTTGGCC
GATTTGCAACCCGTGCACAAGCCCCTCACTCCCGCGGAACTGAGCGGTCG
CTGGGAGCTGGTGTACACCACGGTTGAGCTCTTCCGCGCCTCCCCCTTCT
TTCAGATGGTTGAGGCTGCATACGACGATCCGGAAAAGTCGAACCTGTTC
TTCAAGCTACACCAGTTGCAAACGGGCTCGTGGGGCGCAAGCTCCATTGG
CAGAATCACGCAGGTTGAGGCTGCATACGACGATCCGGAAAAGTCGAACC
TGTTCTTCAAGCTACACCAGTTGCAAACGGGCTCGTGGGGCGCAAGCTCC
ATTGGCAGAATCACGCAGACCTTGGACCTGATCGAACCGGTCCCGCCCAG
CGCAGACGCAGCGGCGAAGGAGGGAAACTCGACGGTCGCGTCAAACTCGA
TAGCACCGACGGCCGGCGCAATCGGCGGGTCCTTGGAGTCGGAAACCTTG
GACCTGATCGAACCGGTCCCGCCCAGCGCAGACGCAGCGGCGAAGGAGGG
AAACTCGACGGTCGCGTCAAACTCGATAGCACCGACGGCCGGCGCAATCG
GCGGGTCCTTGGAGTCGGAAGTTGACTTGATCATCCTGCCCCTCACGTCG
CTGCCTCTAGTGGGTTTCTGGAAGCTCATCCCGACGTTCGGGGGTTGCAT
CGCGACAAAGGCGAAGTGCTTCCTGAAGGGGGATAAAAACGAAGTTGTAG
AGGTTGACTTGATCATCCTGCCCCTCACGTCGCTGCCTCTAGTGGGTTTC
TGGAAGCTCATCCCGACGTTCGGGGGTTGCATCGCGACAAAGGCGAAGTG
CTTCCTGAAGGGGGATAAAAACGAAGTTGTAGAGCTGGTCGTGGAGTCGA
CGAAGCTCAAGGCGGTCGAGGACGTACCATTGCTCCCGCTTGCAGGGCCG
CTGTTCGAGGGTACGGAGTTCCCAACCGGGGAGGTCGCAAAGAAGGCGAG
AAAGAAGCCTCTGGTCGTGGAGTCGACGAAGCTCAAGGCGGTCGAGGACG
TACCATTGCTCCCGCTTGCAGGGCCGCTGTTCGAGGGTACGGAGTTCCCA
ACCGGGGAGGTCGCAAAGAAGGCGAGAAAGAAGCCTGTCATGGGAAATGT
GCCGGTCACGAGGCAGACGGTCGTGTACATCGACGACAACATGCGGGTCA
TGGAAGACAAGGCCGGCGAGCTCTACATCTACGCCAGGTGAGTCATGGGA
AATGTGCCGGTCACGAGGCAGACGGTCGTGTACATCGACGACAACATGCG
GGTCATGGAAGACAAGGCCGGCGAGCTCTACATCTACGCCAGGTGA
back to top