mRNA_P-fluviatile_contig13.1747.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1747.1 vs. uniprot
Match: D7G862_ECTSI (Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G862_ECTSI) HSP 1 Score: 458 bits (1178), Expect = 9.520e-154 Identity = 280/476 (58.82%), Postives = 333/476 (69.96%), Query Frame = 2
Query: 53 MATTGHGSRRFWKALTAMLLVACSFHYAVGDEQTQAAV--------------------ADVLAVPGAVESFEVLFDRGNKLLAAGNSKDAVGILNAAIMAWEQETGATNLENAAAARAAQLLGEALVLEGEDESAASAFARAAAASETVFGRESSQLVASLTGLGLALLRQGQLSDAASALASALQARALKSDKGMAKATQGMIENLVDLVKASVHGRAEEGGSELEAALLAVNHVNRLAWRYFVQNLPFEGEHVMEEVCGSLQREKEEDGSS-PSPPRDLLISALLFNVGFFRLAVLGNYKSAAEVLQRAYGLRKAVLGEVHTLTVQARVSRGWALTLSGETLLAVKELTSSAKALLSAGQPHAADRLLRQALQQGYDPLGANTYANAAFTQHINMLKGWGSEASDKIGSFSQTQMDIAANSRLTGKEPAMKVATRTLAEALKGEITDKSAGIELLELAHADKEQLAGEMALLLK 1417
MATTG G+RRF AL AMLLVACSF AVGD + AAV A+ + V +S L DRG LL AG SKDAV L+AAI WE+E G+ L + AAA AQ LGEAL LEG+ E AAS F RA ASE +FG +S+Q VA LTGLGLAL RQGQLSDAAS L AL AL+ D+GM +TQ + + L L K+ + E G SEL ALLAV+H+N LA RYFVQ LP +GE V++ SL EKE+ GSS PS RDL+ISALLFN+GF RLAVLG + SAA VLQ+A LRKAVLGE H+LT+QA VSRGWALTL+G+TLLAV+ELTS+A+ALLSAGQPHAADRLLRQ LQQGYDPLG TYA+A +TQH NML+ WGSE K +F Q++IA +RLTGKE MK ATRTLA A++ +I D++ G ELL+L +DKE+L E+ LLLK
Sbjct: 1 MATTGDGARRFMHALAAMLLVACSFPCAVGDGSSAAAVQQKAKALRDAVEGNNRAPPAAEPVVVAPERDSPGSLLDRGTALLYAGKSKDAVAALDAAITGWEEEMGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFRQGQLSDAASTLGRALSVHALRPDEGMVTSTQDVTKTLDGLAKSLIRRPPEGGESELGGALLAVDHINPLAGRYFVQKLPHQGESVLQ----SLYVEKEDAGSSEPSALRDLVISALLFNLGFLRLAVLGEFSSAASVLQQAIELRKAVLGEAHSLTMQAVVSRGWALTLTGDTLLAVEELTSAAEALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSNMLRAWGSEGIAKADAFCLNQLNIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLKLNPSDKERLWEEIGLLLK 472
BLAST of mRNA_P-fluviatile_contig13.1747.1 vs. uniprot
Match: A0A6H5JZA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZA8_9PHAE) HSP 1 Score: 143 bits (360), Expect = 8.160e-37 Identity = 77/121 (63.64%), Postives = 90/121 (74.38%), Query Frame = 2
Query: 1055 ALLSAGQPHAADRLLRQALQQGYDPLGANTYANAAFTQHINMLKGWGSEASDKIGSFSQTQMDIAANSRLTGKEPAMKVATRTLAEALKGEITDKSAGIELLELAHADKEQLAGEMALLLK 1417
ALLSAGQPHAADRLLRQ LQQGYDPLG TYA+A +TQH ML+ WGSE K +F Q+DIA +RLTGKE MK ATRTLA A++ +I D++ G ELLEL DKE+L E+ LLLK
Sbjct: 18 ALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSTMLRAWGSEGIAKADAFCLNQLDIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLELNPGDKERLWEEIGLLLK 138
BLAST of mRNA_P-fluviatile_contig13.1747.1 vs. uniprot
Match: A0A6H5JX93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX93_9PHAE) HSP 1 Score: 130 bits (328), Expect = 7.370e-32 Identity = 91/171 (53.22%), Postives = 104/171 (60.82%), Query Frame = 2
Query: 53 MATTGHGSRRFWKALTAMLLVACSFHYAVGDEQTQAAVAD-VLAVPGAVE-------------------SFEVLFDRGNKLLAAGNSKDAVGILNAAIMAWEQETGATNLENAAAARAAQLLGEALVLEGEDESAASAFARAAAASETVFGRESSQLVASLTGLGLALLRQ 505
MATTG G+RRF AL AMLLVACSF AVGD + AAV A+ AVE S L +RG LL GNSKDAV L+AAI WE+E G+ L + AAA AQ LGEAL LEG+ E AAS F RA ASE +FG +S+Q VA LTGLGLAL +Q
Sbjct: 1 MATTGDGARRFMHALAAMLLVACSFPCAVGDGSSAAAVLQKAKALRDAVEDNNRAPPAAHPVVVVPERDSPGSLLERGTALLYEGNSKDAVAALDAAITGWEEEMGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFQQ 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1747.1 >prot_P-fluviatile_contig13.1747.1 ID=prot_P-fluviatile_contig13.1747.1|Name=mRNA_P-fluviatile_contig13.1747.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=457bp MATTGHGSRRFWKALTAMLLVACSFHYAVGDEQTQAAVADVLAVPGAVESback to top mRNA from alignment at P-fluviatile_contig13:1270280..1275453+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1747.1 ID=mRNA_P-fluviatile_contig13.1747.1|Name=mRNA_P-fluviatile_contig13.1747.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5174bp|location=Sequence derived from alignment at P-fluviatile_contig13:1270280..1275453+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1270280..1275453+ >mRNA_P-fluviatile_contig13.1747.1 ID=mRNA_P-fluviatile_contig13.1747.1|Name=mRNA_P-fluviatile_contig13.1747.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2742bp|location=Sequence derived from alignment at P-fluviatile_contig13:1270280..1275453+ (Porterinema fluviatile SAG_2381)back to top |