mRNA_P-fluviatile_contig13.1745.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1745.1 vs. uniprot
Match: A0A6H5L192_9PHAE (HOOK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L192_9PHAE) HSP 1 Score: 677 bits (1748), Expect = 4.510e-220 Identity = 613/1251 (49.00%), Postives = 721/1251 (57.63%), Query Frame = 1
Query: 1 MDDDHERSLIAWANTFP-----GAAPAASLADFASGDALIPIARVITGTGDGNDDDNYDKTATGWATVFAHMQSAGLIEENARVPGDDD-KLATAVSCLEDLLRHTVGKQCVGRETFILQIMSLDADVQSTLRQIIVGDQ--QQPSDASSSDAGRSPSRYTDDDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGLKSWCSPHPA-SGRRESTRAAGGRTGERAAPVGPKPKSGGQGRTLDMEEAEETLVERAAASAASVPRSLDGDGA-TGWTATAVEVADLKAEVSRLKGQLEEAESARDEAVAVAEAQRDLAVGRQEALSEDLRRARRAAERLTVSEEDAVIAVERDMRAKHEREVAALQERASKAEERVLALEPLEEEVLRLRDDVDVLRPAEAKLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQVLDRCLELEAEVAQIPQLKRQMDRYRRSHTDMEVASREQSRELEIAKEEVSRLTQEVQALADGSGAARNEYRRLQEELKSRAMEEAEG---------GGDXXXXXE------------GMSELNPALTEEMARLRRANEELTAKVDYNTVETIRELEHKADDANRLADSFHQNLTSERELRAAAETSLAAARARIAELEAEIATLHEEHRRTIARHEAEAXXXXXXXXXALEADALRAEMAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLAKQAFGEEVAEIKKVLEGKLEGARKSAADEVATARERAXXXXXXXXXXXXXXXXXRREVQKLEGMLSAGKEAALKVIHRLENNAREQREEALLVRQRQHADHQAKMVALNSEFDKYRETHTVDDVSYHKDMDQWEMSIVAKNRLVAELQVRVDALEKDKRRLEREKTYYWGQAEELRISAAAGGRADPTRDAEHLQLVEQTRELIEENRELRQRAQEG--GGGGMSTRSGGRWGSSGVAAMRAEHEAEMTALKEEKQDMLLKYHATSSKLNEQERRCADLNEEVEEIRAQVVSLQLENKRQEKRLRD-YESSAXXXXXXXXXXXXXXXXXNSTDPCTQKENQCTLPPSATKYKRHQPGITRDLSVSQFGAVSKGGIPDDGWTTSAVANAAPAAPGDSGAGADDAARARRGPLRGLGNTQ-QXXXXXXXXXXAKLXXXXXXXXXXXXEGKQDVAALGG--DDETPPECRQS 3642
MD HE+ L+AWANTF GAAPAASLA F +GDALIPIAR I G + D + TA+GWA V +++ SA LIE++ +VP ++D K AV+CLE LL HT C GR TFI QIMSLD DVQS LR ++ G++ + DASSS+AG SP R DD XXXXXXXXXX +GL+SW SPHP S RR+S GG TG RAA VGP+P QGRTLDME GWT TAVEV DLKAEVSRLK QLE A +AR EAV+V EAQRD A++AE R AL XXXXXXX HA+VLDRCL LE EV QIPQL+RQ+ +YRRS TDMEVASREQSRELE A+EE +RL+QEV+ L + AAR E RRLQE +R E ++ GG E G+SE NP L EEMARLR ANE+L AKVDYNT ETI +LE KA DA+RLAD FH +L SERE+RAAAE SLA ARARIA+LE++I L EEH T+ R E E+ + LR EMAAA XXXXXXXX XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX VAE++K LEGKL+ R+ AA+E+ XXXXXXXXXXXXXXXX R++++L S GK+ ALK I RLE NAR+QREE+ L+ Q Q ADH+AKM AL+ EF +YRETHTVDD+SY++D+DQWEMSI K +++ +LQ ++ ALEKDKR+LEREKT+YWG+AEELR+SAAAGGRADP+RDA+HLQLVEQTRELIEENRELRQRAQ+ GGG MSTRSGGRWGSSGVAAMRAEHEAEMTALKEEKQD+LLKYHATS+KLNE+++RCA+LN EVEE RAQ VSLQL NKRQEK+L+D +SA XXXXXXX ++ R + G R S + +S G+ G T G G+GA AA RGPLRGLGN + Q A L + + V A G D++TPPEC QS
Sbjct: 1 MDGRHEQGLVAWANTFSSSFPEGAAPAASLAHFTNGDALIPIARTILGDNHDDHDSDGQATASGWAGVISYLHSADLIEKDLQVPTEEDSKRDMAVTCLEALLHHTCQDTCAGRATFIRQIMSLDTDVQSVLRHVVAGEEPLDEDGDASSSEAG-SPYR---DDRXXXXXXXXXXXPAAIAAAHLSPGSGASRRRRTSITTSGSSYDSSHSDEEDGLGLESWYSPHPRRSARRKSKVPTGGGTGGRAARVGPRPPR--QGRTLDMEXXXXXXXXXXXXXXXXXXXXXXXASCPAGWTVTAVEVVDLKAEVSRLKDQLERAAAARAEAVSVVEAQRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEAEXRASALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYREKIEELSGLPGQLKREEKAHAEVLDRCLRLETEVTQIPQLRRQVGQYRRSQTDMEVASREQSRELETAREESARLSQEVKDLRESYEAARGEQRRLQERWTARDTEGSDDEWAGGGIGEGGHGFLGAELLGGVFAGQAVVGISEFNPELMEEMARLRLANEQLKAKVDYNTEETILDLERKAGDASRLADKFHDSLASEREVRAAAELSLAEARARIADLESQIVALREEHLATVTRLEGESERRE---------EGLRGEMAAAXXXXXXXXXRVEEERSGERAEFREAAARXXXXXXXXXXXXXXAHEKEKGESARXXXXXXXXXXXXXXXXXXX------------------VAEVEKELEGKLQEERRLAAEELXXXXXXXXXXXXXXXXXXXXXXXAERQLRELAEKFSTGKQEALKAIGRLETNARDQREESALLLQEQMADHEAKMAALSGEFARYRETHTVDDISYNQDVDQWEMSIATKKKMIGDLQGQLRALEKDKRKLEREKTFYWGRAEELRMSAAAGGRADPSRDADHLQLVEQTRELIEENRELRQRAQDNSDGGGAMSTRSGGRWGSSGVAAMRAEHEAEMTALKEEKQDLLLKYHATSAKLNEEQQRCAELNGEVEEARAQFVSLQLVNKRQEKKLQDSIATSARMTSPATGSSXXXXXXXXXXXXXXXXXXXXXXXXXXARHLRSRAG--RGGSKDKGVELSLKGVEGGGSTKG----------GYDGSGAAGAAPGGRGPLRGLGNARLQEEALVLDNKKAVL------------DKEAGVLARVGRVDEDTPPECVQS 1194
BLAST of mRNA_P-fluviatile_contig13.1745.1 vs. uniprot
Match: A0A7S2P099_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P099_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.490e-15 Identity = 74/236 (31.36%), Postives = 110/236 (46.61%), Query Frame = 1
Query: 1084 RDMRAKHEREVAALQERASKAEERVLALEPLEEEVLRLRDDVDVLRPAEAKLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQVLDRCLELEAEVAQIPQLKRQMDRYRRSHTDMEVASREQSRELEIAKEEVSRLTQEVQALADGSGAARNEYRRLQEELKSRAMEEAEGGGDXXXXXEGMSELNPALTEEMARLRRANEELTAKVDYNTVETIRELEHKADDANRLADSFHQ 1791
RDM K+ E ++ +R + ++EE LRLRD++D+ + ++ K + HA ++D+CLE+E E+AQ+ LKRQ++ YR TD EVA E +L KE+ S L AL G ++E LQ+ L+ EGG GMSELNP L EE+ LR L V++++ LE DDA RL++ F +
Sbjct: 260 RDMEDKYSHETHEQKKELEILRDRDQNITEMKEENLRLRDELDIFQCSKEKFTHTEEQLRKCREKIEAFGDVHDALQREEKAHAVLVDKCLEMENELAQLKPLKRQLEEYRVRATDAEVALAECRDDLRRFKEKSSGLEGANLALQRGVNLQQSEADALQKRLQEEGQRSGEGGSAVGV---GMSELNPELMEELKMLRCEYARLKDFEAKREVDSVQRLEESCDDAKRLSERFKE 492
BLAST of mRNA_P-fluviatile_contig13.1745.1 vs. uniprot
Match: A0A4D9CTG0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTG0_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.320e-6 Identity = 62/217 (28.57%), Postives = 91/217 (41.94%), Query Frame = 1
Query: 1168 EPLEEEVLRLRDDVDVLRPAEAKLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQVLDRCLELEAEVAQIPQLKRQMDRYRRSHTDMEVASRE-------QSRELEIAKEEVSRLTQEVQALADGSGAARNEYRRLQEELKSRAMEEAEG--GGDXXXXXEGMSELNPALTEEMARLRRANEELTAKVDYNTVETIRELEHKADDANRLADSFHQ 1791
E L +V L+D+VDVLRPA L+ H + L++CL+LE E+ Q+P LKRQ++ + T+ E+ RE Q R + EE++ L Q + A R E + EG GG G++E NP + + L E L A++ VE I LE + D RLA+SF +
Sbjct: 414 EGLRAQVKELQDEVDVLRPAAESLALTEASLEKARGKLQGLQDVRDRLQAEQAAHGEALEKCLQLERELQQVPVLKRQVEALKAGATENELLLRELQATAAEQERTAKAQTEEIATLRQSLSMAA----------LRSTEPATGGMLVVGEGQVGGGVGV---GLTECNPDVVRNIRTLEAEVERLRAQISDTAVEKIEALEVEKDRHRRLAESFEE 617
BLAST of mRNA_P-fluviatile_contig13.1745.1 vs. uniprot
Match: A0A7S2KF11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KF11_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.010e-5 Identity = 46/150 (30.67%), Postives = 73/150 (48.67%), Query Frame = 1
Query: 1342 LDRCLELEAEVAQIPQLKRQMDRYRRSHTDMEVASREQSRELEIAKEEVSRLTQEVQALADGSGAARNEYRRLQEELKSRAMEEAEGGGDXXXXXEGMSELNPALTEEMARLRRANEELTAKVDYNTVETIRELEHKADDANRLADSFHQ 1791
+ + ++LE E++ + L+RQ++ Y+ T EV + S EL+ RNE LQ+ LK ++ G + EG+SELNPA+ EE+ RLR N L V +T + + +L DD+ RL++SF Q
Sbjct: 383 VQQVIDLENELSSLAPLRRQLETYKARATAAEVKLTDVSDELQKXXXXXXXXXXXXXXXXXXXQFRRNEAEELQKMLKEETKKDL--GNEILGLGEGVSELNPAVAEEITRLRNENSALKNFVARHTQDAVEQLGEDLDDSRRLSESFKQ 530 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1745.1 >prot_P-fluviatile_contig13.1745.1 ID=prot_P-fluviatile_contig13.1745.1|Name=mRNA_P-fluviatile_contig13.1745.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1215bp MDDDHERSLIAWANTFPGAAPAASLADFASGDALIPIARVITGTGDGNDDback to top mRNA from alignment at P-fluviatile_contig13:1248627..1258489+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1745.1 ID=mRNA_P-fluviatile_contig13.1745.1|Name=mRNA_P-fluviatile_contig13.1745.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9863bp|location=Sequence derived from alignment at P-fluviatile_contig13:1248627..1258489+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1248627..1258489+ >mRNA_P-fluviatile_contig13.1745.1 ID=mRNA_P-fluviatile_contig13.1745.1|Name=mRNA_P-fluviatile_contig13.1745.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7290bp|location=Sequence derived from alignment at P-fluviatile_contig13:1248627..1258489+ (Porterinema fluviatile SAG_2381)back to top |