mRNA_P-fluviatile_contig13.1688.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: A0A6H5KLY6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY6_9PHAE) HSP 1 Score: 445 bits (1144), Expect = 1.580e-150 Identity = 229/378 (60.58%), Postives = 274/378 (72.49%), Query Frame = 2
Query: 74 TMCKRALCKSSRSRHFTGAPITASE----------EGTSNNGRSEYFKSSPDSCAGSASSFDWGSAFTERAFRALKACEFFERSGVRHLCVSKCYFKAYEPFRRWHALRLEVARAGSSTRVLDGWSIRMDGGEKAHHSWCIGYISPDGREYASAKLALGALGLGRAATLCPTSSPTLRRNRGSSSGSPQQALAAHNATRHYPDGPAYLLKNPPAGAFPASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRGTQEV*RAHRTSQPTVPLLEELKLDFTSRS 1177
T KRA C SRHF AS+ +G RSEYF S+PDSCAGSASSFDWGSAFTE+AF ALK+CE FE +GVRH+C ++CYF+AYEP R+WHALRL VAR G+ST VL GW ++MD G+ A SW I Y++PDG + K L ALGLG + PTS P+LRR + + SPQ AA RH+P+G AYLLKNP AG FP SPFGLIEELLTDDPWKLLIGCIMLNQT+RSQ D VL FLE FPTA VAA+ASV+ + R+VAPLGLQ+RRP+AIIRFSQEYLSK W +EL+WVGKYA+DAHKIFIER+W+EV P+DHALNW VEWMRG Q+ ++ +VP LE + D ++ +
Sbjct: 20 TRRKRAPCPRVSSRHFDTESKAASKASADQLPKAFKGLKGERRSEYFTSTPDSCAGSASSFDWGSAFTEKAFFALKSCEHFEHTGVRHMCKNRCYFRAYEPVRKWHALRLAVARVGASTGVLTGWCVQMDRGQTAEDSWRIRYVAPDGSVFPCVKPVLKALGLGHGVSGYPTSPPSLRRKSRTPTTSPQPLPAACATIRHHPNGSAYLLKNPRAGTFPPSPFGLIEELLTDDPWKLLIGCIMLNQTTRSQMDPVLVRFLEKFPTADVAAAASVDEMTRVVAPLGLQERRPIAIIRFSQEYLSKAWTNVKELYWVGKYAADAHKIFIERKWREVQPDDHALNWWVEWMRGAQQAEEPLSAAERSVPALEVVGRDGSANT 397
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: A0A835Z3C1_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C1_9STRA) HSP 1 Score: 142 bits (357), Expect = 7.290e-37 Identity = 68/129 (52.71%), Postives = 89/129 (68.99%), Query Frame = 2
Query: 695 PASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEW 1081
P SPFGL+EELL DPW+LL+ CIMLNQTSR Q D VL FL+ PT AA A +A ++ PLGL K+RPVA++RFS+EYL+ W+ L WVG+Y DA+ IF+ ++W+ V P+D L V+W
Sbjct: 2 PLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLA--WRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: E1Z2K4_CHLVA (ENDO3c domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z2K4_CHLVA) HSP 1 Score: 137 bits (346), Expect = 3.230e-35 Identity = 63/130 (48.46%), Postives = 88/130 (67.69%), Query Frame = 2
Query: 695 PASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWM 1084
P SPFGL+EE L DDPWKLL+ C++LN+TS +Q +V+W PT A A +A V+ V ++ PLGL ++R AI + SQ+YL K W+ P EL+ +GKYA+DA+ +F RW+EV PED L +W+
Sbjct: 4 PVSPFGLLEEELFDDPWKLLVACMLLNKTSGAQVRKVIWQLFALCPTPAAAIAADVQQVQALIQPLGLFRKRAAAIQQLSQDYLYKQWRDPTELYGIGKYAADAYHMFCRGRWREVAPEDKDLRRYRDWL 133
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: UPI001B35343A (methyl-CpG-binding domain protein 4 isoform X3 n=1 Tax=Ochotona curzoniae TaxID=130825 RepID=UPI001B35343A) HSP 1 Score: 139 bits (351), Expect = 2.440e-34 Identity = 93/244 (38.11%), Postives = 128/244 (52.46%), Query Frame = 2
Query: 392 SSTRVLDGWS-IRMDGGEKAHHSWCIGYISPDGREYASAKLALGALGLGRAATLCPTSSP--TLRRNRGSSSGSPQQALAAHNATRHYPDGPAYLLKNPPAGAF-----PASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRGTQE 1099
S V GW + DG E+A S +G A LG G AAT CP S P T+ R + ++ + + ++++ G L P AF P SPF L++E L DPWKLLI I LN+TS VLW+FLE +P+A A +A V+ ++ PLGL R II+FS EYL+K WK P EL+ +GKY +D+++IF W++VHPEDH LN +W+ E
Sbjct: 30 SRDEVATGWERVGEDGIEEAMCG------SSEGNPLLPDPTAAAELG-GTAATECPRSVPEDTIPRTQ-----IERRKTSLYFSSKYNNAG----LSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGRMAIPVLWEFLEKYPSAEAARAADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWKYPIELYGIGKYGNDSYRIFCINEWKQVHPEDHKLNKYHDWLWENHE 257
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: A0A516AGE4_LINPO (Methyl-CpG-binding domain protein 4 n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AGE4_LINPO) HSP 1 Score: 147 bits (371), Expect = 5.980e-34 Identity = 105/293 (35.84%), Postives = 141/293 (48.12%), Query Frame = 2
Query: 269 KACE-FFERSGVRHLCVSKCYFKAYEPFRRWHALRLEVARAGSSTRVLDGWSIRMDGGEKAHHS--WCIGYISPDGREYASAKLALGAL-------GLGRAATLCPTSSPTLRRNRGSSSGSPQQALAAHNATRHYPDGPAYLLKNPPAGAFPASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSK--------PWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRGT 1093
K C ++E RHLC CYF+ YEP R+ HALR AR+ L GW+ R+ H S WC+ P G SAK A AL L AA+ P+ P G+S Q AH P SPFGL+EE+LT +PW+LL+ C++LN+T R DR+L F + +P+A A V + I+APLGL ++R + RFS+EYL P + L VG+YA DAH++F+ R V P D L W VE+ + T
Sbjct: 901 KQCNVYWETGSCRHLCEHLCYFREYEPARQLHALRCR-ARSHPLRPSLQGWTARL---ALTHESPFWCVVLHDPSGAVRGSAKDAWTALVNDALDAPLPGAASAPPSPLPLSSSQAGASE---MQHSFAH----------------------PRSPFGLVEEVLTGEPWQLLVACLLLNRTGRIVVDRLLGRFFQRWPSAEALVGADVAELESILAPLGLHRKRSRMLCRFSREYLEAVAELGSPLPLSRLRRLHGVGRYAYDAHELFV--RGVLVQPTDIYLGWFVEYHQQT 1162
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: A0A7R9TQ64_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TQ64_9VIRI) HSP 1 Score: 139 bits (349), Expect = 7.920e-34 Identity = 68/138 (49.28%), Postives = 93/138 (67.39%), Query Frame = 2
Query: 680 PAGAFPASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTA-AVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRG 1090
P P SP+GL+EEL +PWKLL+ C++LN T+R Q DRVL +PTA A+AA+ + R++APLGLQ+RR +++RFS+EY KPW EL VGKYA+DA+ IFI RW+E P+DHALN+ ++
Sbjct: 136 PGWLAPHSPYGLLEELYRREPWKLLVSCMLLNCTTRLQVDRVLPALFNRYPTARALAAAPDAAELERLLAPLGLQRRRSKSLLRFSREYTEKPWADVMELHGVGKYAADAYAIFILGRWRETRPDDHALNFYHRFLES 273
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: A0A2P6VLS1_9CHLO (Methyl-binding domain 4 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLS1_9CHLO) HSP 1 Score: 140 bits (352), Expect = 1.210e-33 Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 2
Query: 524 LGLGRAATLCPTSSPTLRRNRGSSSGSPQQALAAHNATRHYPDGPAYLLKNPPAGAFPASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRGT 1093
LGL A TS P GSS +P A + D P L PP SP+GL+EE L DDPWKLL+ C++LN+TS +Q +V+W+ PT A A +A V+ V ++ PLGL ++R +AI + S EYL K W+ P EL+ +GKYA+DA+ +F RW+EV P+D L EW+ T
Sbjct: 143 LGLSAAKRRRSTSHPA-----GSSPSAPSPAAGTAQQAQQEAD-PRLCLWEPPV-----SPYGLLEEELYDDPWKLLVACMLLNKTSGAQVRKVIWELFSLCPTPAAAIAADVQQVQNLIQPLGLFRKRALAIQQLSHEYLYKVWRDPTELYGIGKYAADAYLMFSRGRWREVQPDDKDLKRYHEWLEST 321
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: UPI0009A268CF (methyl-CpG-binding domain protein 4 isoform X1 n=2 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A268CF) HSP 1 Score: 142 bits (359), Expect = 2.340e-33 Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = 2
Query: 695 PASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRGTQE 1099
P SPF L++E L DPWKLLI I+LN+TS + VLWDFLE +P+A VA A + +A ++ PLGL + R AII+FS E+L+K WK P EL +GKY +D+++IF + W+EV P DH LN EW+ QE
Sbjct: 377 PRSPFKLVQETLFHDPWKLLIATILLNKTSGKKAIPVLWDFLERYPSAEVARVADWKEIAALLKPLGLYELRAKAIIKFSDEFLTKQWKYPIELHGIGKYGNDSYRIFCVKEWKEVQPRDHKLNKYWEWLWANQE 511
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: A0A061RHZ0_9CHLO (Methyl-CpG-binding domain protein 4 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RHZ0_9CHLO) HSP 1 Score: 136 bits (343), Expect = 4.370e-33 Identity = 62/133 (46.62%), Postives = 89/133 (66.92%), Query Frame = 2
Query: 695 PASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRGT 1093
P SP+GLI+E + DDPWK+++ CI+LN+TS +Q RV+WD PT A + + + +++ PLGL ++R I RFS++YL+K WK P EL VGKYA+DA+ IF E W++V P D LN EW++ T
Sbjct: 127 PQSPYGLIQEQVYDDPWKVMLCCILLNKTSITQVRRVIWDLFRMCPTPEAAIATDLAEIEQLILPLGLHRKRARDIKRFSEDYLTKDWKSPYELHSVGKYAADAYSIFCEGAWRDVEPCDKELNKYHEWLKAT 259
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Match: D4A9W8_RAT (Methyl-CpG-binding domain protein 4 n=5 Tax=Tetrapoda TaxID=32523 RepID=D4A9W8_RAT) HSP 1 Score: 141 bits (356), Expect = 8.710e-33 Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 2
Query: 695 PASPFGLIEELLTDDPWKLLIGCIMLNQTSRSQTDRVLWDFLEHFPTAAVAASASVEGVARIVAPLGLQKRRPVAIIRFSQEYLSKPWKKPEELFWVGKYASDAHKIFIERRWQEVHPEDHALNWLVEWMRGTQE 1099
P SPF L++E L DPWKLLI I LN+TS VLW+FLE +P+A VA +A V+ ++ PLGL R II+FS EYL+KPW+ P EL +GKY +D+++IF W++VHPEDH LN +W+ E
Sbjct: 410 PRSPFNLVQETLFHDPWKLLISTIFLNRTSGKMAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKPWRYPIELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHE 544 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1688.1 >prot_P-fluviatile_contig13.1688.1 ID=prot_P-fluviatile_contig13.1688.1|Name=mRNA_P-fluviatile_contig13.1688.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=345bp MTMCKRALCKSSRSRHFTGAPITASEEGTSNNGRSEYFKSSPDSCAGSASback to top mRNA from alignment at P-fluviatile_contig13:747517..749769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1688.1 ID=mRNA_P-fluviatile_contig13.1688.1|Name=mRNA_P-fluviatile_contig13.1688.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2253bp|location=Sequence derived from alignment at P-fluviatile_contig13:747517..749769+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:747517..749769+ >mRNA_P-fluviatile_contig13.1688.1 ID=mRNA_P-fluviatile_contig13.1688.1|Name=mRNA_P-fluviatile_contig13.1688.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2070bp|location=Sequence derived from alignment at P-fluviatile_contig13:747517..749769+ (Porterinema fluviatile SAG_2381)back to top |