mRNA_P-fluviatile_contig13.1685.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1685.1
Unique NamemRNA_P-fluviatile_contig13.1685.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: D7FKH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH6_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 4.870e-181
Identity = 308/458 (67.25%), Postives = 351/458 (76.64%), Query Frame = 1 
Query:    1 MRRVASSFGRCLHTSSTAGARAISTRAVCRNGREFGPSSA-WISKNTSGVSWNASAAATAASPSTSHIRHLSSPSSXXXXXXXXXXA-TEPGKSPPAKA-PVKTLASSEGATPSFLTGPRITSKKGYLERENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGA-EKGRTEARLIAALDGLEMAVGKENASTANAMTNLALFLKGDGQYAEATELYTTVLETRKKLYGPKHYDVLVSMHNLSMVHQAAGREDEAVQLQEEISKIGEEMGMTAEEQSEASRAAEGTAGGPGGAVKLARGEGNETRSARKENKRDNGNSGSAWKPMQTRDRRKSKRRK 1362
            MRR A+    CL   S + +R      V R+G E+GPSSA W S +T     +A+AAA   + + SH R LSS SS          A +EP K    ++ PV TL SSEG++PS LTGPR+ SKKGYLERE MIRETQKA+REYYKEGMYQDALEV +RL+DQVDDHFGR HGVYGSALSDMALM+KS+GRH EATE YLKALEVYRAVYKGEENAS+A  LHNLGM FRAMA++SKKLE+IPLMERAAESF RCVQIREK+L NNHPDLQLARSRLA VQ  LG  EK  TEARL AALDGL+MAVG ++ASTANA TNLALFLKG+G+ AEAT+LYT VLETRKKLYG KH+DVLVSMHNLSM H  AGREDEA++L++EI+KIGEEMGMT EEQSEAS AA       GGAVKLA+ EG +    +K +      SGS WKPM TR RRK K+RK
Sbjct:    1 MRRAATGVANCLRVVSASCSRTTPAVLVGRHGVEYGPSSAMWPSVHTGSSKNSATAAAAVPAATPSHGRRLSSKSSSGKPTEAADGAGSEPEKILEVESTPVNTLVSSEGSSPSMLTGPRVKSKKGYLEREGMIRETQKAVREYYKEGMYQDALEVAERLVDQVDDHFGRAHGVYGSALSDMALMLKSMGRHQEATETYLKALEVYRAVYKGEENASFASTLHNLGMLFRAMAEDSKKLEKIPLMERAAESFERCVQIREKILTNNHPDLQLARSRLATVQDMLGGGEKEGTEARLRAALDGLQMAVGNDDASTANAKTNLALFLKGEGKLAEATDLYTDVLETRKKLYGRKHFDVLVSMHNLSMTHHVAGREDEAIKLRDEIAKIGEEMGMTPEEQSEASGAA-------GGAVKLAQEEGKKAPEKKKND------SGSTWKPMHTRSRRKGKKRK 445
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BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: W4GGN5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGN5_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.720e-36
Identity = 93/266 (34.96%), Postives = 143/266 (53.76%), Query Frame = 1 
Query:  352 ITSKKG----YLERENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENASTANAMTNLALFLKGDGQYAEATELYTTVLETRKKLYGPKHYDVLVSMHNLSMVHQAAGREDEAVQLQEEI 1137
            +TS  G    Y+  E+ I   Q  IRE Y +G +   LE+ +   D V DHFG  H VY S L+++ALM K++   DEA   Y  AL VY++   GE +AS+A  LHNLG  +R  A     ++++  ++ A E F   +++R  +L  +HPD+ ++   + M+  H   +K + E  L+ A + LE  VG  +  TA A  NL +  K  G++  A EL+      RK   G  H + + +MHN +   +A GRED+A  +Q+EI
Sbjct:   36 VTSTPGRRSDYMIVESDIAGMQHKIRELYSKGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDILAPDHPDIAISMCNVGMLYWHTH-KKAKAEEILVEAAERLESKVGPTSPLTALAWNNLGIVYKELGKFDAAVELFAKATAVRKASLGDMHVETITTMHNWAEALRAGGREDDAAVIQKEI 299
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BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: A0A397DE51_9STRA (EF-hand domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE51_9STRA)

HSP 1 Score: 123 bits (308), Expect = 8.590e-26
Identity = 81/236 (34.32%), Postives = 122/236 (51.69%), Query Frame = 1 
Query:  352 ITSKKG----YLERENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENASTANAMTNLALFLKGDGQYAEATELYTTVLETRKKLYGPKH 1047
            +TS  G    Y+  E+ I   Q  IRE Y  G +   LE+ +   D V DHFG  H VY S L+++ALM K++   DEA   Y  AL VY++   GE +AS+A  LHNLG  +R  A     ++++  ++ A E F   +++R  +L  +HPD+ ++   + M+  H   +K + E  L+ A + LE  VG  +  TA A  NL +  K  G++  A EL+      RK   G  H
Sbjct:   33 VTSTPGRRSDYMIVESDIAGMQHKIRELYSYGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECFEESLRVRRDILAPDHPDIAISMCNVGMLYWHTH-KKAKAEEILVEAAERLESKVGPTSPLTALAWNNLGIVYKELGKFDAAVELFAKATAVRKASLGDMH 266
[Close]
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: A0A485LCH3_9STRA (Aste57867_19411 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCH3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.130e-25
Identity = 78/255 (30.59%), Postives = 128/255 (50.20%), Query Frame = 1 
Query:  382 ENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENASTANAMTNLALFLKGDGQYAEATELYTTVLETRKKLYGPKHYDVLVSMHNLSMVHQAAGREDEAVQLQEEISKI 1146
            E+ I   Q+ IRE+Y +G +   LE+ +   D V  HFG +H VY S L++MALM K++   +E+   Y  AL VY+A   GE +AS+A  LHNLG   R  +     +++I  ++ A E F   +++R  +L  +HPD+ ++   + ++  H   +K + E  L+ A++ LE  VG  +  TA A                                     + + +MHNL+   +AAGR+DEA ++QE I ++
Sbjct:   56 ESEIAGMQQKIREFYSKGDFVSGLEIAEICRDTVKVHFGEEHPVYASTLNNMALMQKNLSLLEESIATYEHALRVYKACV-GENHASWATTLHNLGGVHRLHSHALTGMKKIESLDLALECFEESLRVRRDILAADHPDIAISMCNVGILYWHTH-KKAKAEDMLVDAVERLEAKVGPSSPLTALAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETITTMHNLAETLRAAGRDDEATKIQEAILEL 308
[Close]
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: A0A024UG34_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG34_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.260e-24
Identity = 79/266 (29.70%), Postives = 129/266 (48.50%), Query Frame = 1 
Query:  352 ITSKKG----YLERENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENASTANAMTNLALFLKGDGQYAEATELYTTVLETRKKLYGPKHYDVLVSMHNLSMVHQAAGREDEAVQLQEEI 1137
            +TS +G    Y+  E  I   QK IRE Y +G +   LE+ +   D V DHFG  H VY S L+++ALM K++ + DEA E Y  AL VY++   GE +AS+A  LHNLG  +R  A     ++++  ++ A E F   +++R ++L  +HPD+ ++   + M+  H   +K + E  L+ A++ LE  VG  +                                               +MHN +   +A+GR+D+A ++Q+ I
Sbjct:   35 VTSTQGRRNDYMVVEADIAGMQKKIRELYSKGDFVSGLEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHSLSGMKKVEGLDHALECFEESLRVRREILAADHPDIAMSMCNVGMLYWHTH-KKEKAEEMLVEAVERLEAKVGATSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTMHNWAEALRASGRDDDAAEIQKTI 298
[Close]
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: A0A3R6YC42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YC42_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 6.440e-16
Identity = 69/244 (28.28%), Postives = 108/244 (44.26%), Query Frame = 1 
Query:  406 KAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENASTANAMTNLALFLKGDGQYAEATELYTTVLETRKKLYGPKHYDVLVSMHNLSMVHQAAGREDEAVQLQEEI 1137
            K IRE Y +G +   LE+ +   D V DHFG  H VY S L+++ALM K++ + DEA E Y  AL VY++   GE +AS+A  LHNLG  +R  A     ++                    K+L  +HPD+ ++   + M+  H   +K + E  L+ A++ LE  VG  +                                               +MHN +   +A+GR+D+A ++Q+ I
Sbjct:  149 KKIRELYSKGDFVSGLEMAEICRDAVRDHFGDDHPVYASTLNNLALMQKNLSQLDEAIESYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHSLSGMK--------------------KILAADHPDIAMSMCNVGMLYWHTH-KKEKAEEMLVEAVERLEAKVGATSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMHNWAEALRASGRDDDAAEIQKTI 370
[Close]
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: A0A3L6VBZ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VBZ1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.660e-14
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 1 
Query:  352 ITSKKG----YLERENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESF 747
            +TS  G    Y+  E+ I   Q  IRE Y  G +   LE+ +   D V DHFG  H VY S L+++ALM K++   DEA   Y  AL VY++   GE +AS+A  LHNLG  +R  A     ++++  ++ A E F
Sbjct:   36 VTSTPGRRSDYMIVESDIAGMQHKIRELYSYGDFVSGLEMAEICRDTVRDHFGEDHPVYASTLNNLALMQKNLSLLDEAIGSYEAALRVYKSCV-GENHASWATTLHNLGGVYRLQAHNLSGMKKVEGIDHALECF 170
[Close]
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: M4BVV7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVV7_HYAAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.320e-12
Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 1 
Query:  556 VGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENASTANAMTNLA 954
            +G+ DEA E Y  AL+ Y+A   GE++AS+A  L+NLG+ +RA+A  S  L+R+  + RA +     ++IR ++L   HPD+ L+ S L ++      +  +  A L  A++ LE   G E+  TA    NLA
Sbjct:    1 MGQLDEAVEAYEFALQTYKATV-GEQHASFATTLYNLGLVYRALALASSSLDRVTALHRALDCIQESLKIRREILEPGHPDIALSLSNLGVLYWQ-NKQPDKAFAVLAEAVEMLERKTGPESVLTALVKNNLA 131
[Close]
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: K3X1E6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1E6_GLOUD)

HSP 1 Score: 74.7 bits (182), Expect = 6.520e-11
Identity = 55/187 (29.41%), Postives = 84/187 (44.92%), Query Frame = 1 
Query:  370 YLERENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENAST 930
            Y + E  I   Q+ IR+ Y  G Y +ALEV     D V  HFG KH V+ S ++++ALM K++GR +EA E Y  A                             ++  +  +ER+  + RA + F   ++IR+ +L   HPD+ L    L ++  H   +  +    L  A D LE  VG  +  T
Sbjct:   62 YAQVEQDIAAMQREIRDAYNAGNYNEALEVGLSCRDAVKGHFGEKHPVFASTITNIALMYKNLGRMEEAVESYEYAXXXXXXXXXXXXXXXXXXXXXXXXXXX-TISLSAAGMERVNALHRALDCFEEALKIRKSILEPGHPDISLTMCNLGIIHWH-NKQPEKAFQVLTEAKDLLERRVGPNSTLT 246
[Close]
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Match: A0A5D6Y8Q7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8Q7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.020e-9
Identity = 55/187 (29.41%), Postives = 86/187 (45.99%), Query Frame = 1 
Query:  370 YLERENMIRETQKAIREYYKEGMYQDALEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKALEVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFGRCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLEMAVGKENAST 930
            Y + E  I   Q+ IR+ Y  G + +ALEV     D V  HFG KH V+ S ++++ALM KS+G+ +EA E Y  AL                            ++  +  ++R+  + RA E F   ++IR  +L   HPD+ L+   L ++  H   +  +  A L  A   LE  VG ++  T
Sbjct:   38 YAQVEQDIAAMQREIRDAYNAGNFNEALEVGVSCRDVVRGHFGDKHPVFASTITNIALMYKSMGQTEEAIESYEYALXXXXXXXXXXXXXXXXXXXXXXXXXX-TLSLSATGMDRVGSLHRALECFEESLKIRRVILEPGHPDIALSLCNLGVIHWH-NKQPEKAFATLEEAKAMLERKVGPDSTLT 222
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FKH6_ECTSI4.870e-18167.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W4GGN5_9STRA1.720e-3634.96Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A397DE51_9STRA8.590e-2634.32EF-hand domain-containing protein (Fragment) n=5 T... [more]
A0A485LCH3_9STRA1.130e-2530.59Aste57867_19411 protein n=1 Tax=Aphanomyces stella... [more]
A0A024UG34_9STRA2.260e-2429.70Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3R6YC42_9STRA6.440e-1628.28Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3L6VBZ1_9STRA3.660e-1438.24Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
M4BVV7_HYAAE2.320e-1236.09Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
K3X1E6_GLOUD6.520e-1129.41Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y8Q7_9STRA1.020e-929.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:696180..702060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score531.2
Seed ortholog evalue4.8e-148
Seed eggNOG ortholog2880.D7FKH6
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-12_002030.1
Exons5
Model size1629
Cds size1365
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1685.1prot_P-fluviatile_contig13.1685.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 696444..702060 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.2831888-UTR-P-fluviatile_contig13:696179..6964431622815546.2831888-UTR-P-fluviatile_contig13:696179..696443Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 696180..696443 -
1693562213.5501633-UTR-P-fluviatile_contig13:696179..6964431693562213.5501633-UTR-P-fluviatile_contig13:696179..696443Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 696180..696443 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.2940867-CDS-P-fluviatile_contig13:696443..6967861622815546.2940867-CDS-P-fluviatile_contig13:696443..696786Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 696444..696786 -
1693562213.568663-CDS-P-fluviatile_contig13:696443..6967861693562213.568663-CDS-P-fluviatile_contig13:696443..696786Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 696444..696786 -
1622815546.3091655-CDS-P-fluviatile_contig13:697317..6975651622815546.3091655-CDS-P-fluviatile_contig13:697317..697565Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 697318..697565 -
1693562213.580619-CDS-P-fluviatile_contig13:697317..6975651693562213.580619-CDS-P-fluviatile_contig13:697317..697565Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 697318..697565 -
1622815546.321418-CDS-P-fluviatile_contig13:697977..6981481622815546.321418-CDS-P-fluviatile_contig13:697977..698148Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 697978..698148 -
1693562213.5904007-CDS-P-fluviatile_contig13:697977..6981481693562213.5904007-CDS-P-fluviatile_contig13:697977..698148Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 697978..698148 -
1622815546.3338192-CDS-P-fluviatile_contig13:699107..6992661622815546.3338192-CDS-P-fluviatile_contig13:699107..699266Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 699108..699266 -
1693562213.6029053-CDS-P-fluviatile_contig13:699107..6992661693562213.6029053-CDS-P-fluviatile_contig13:699107..699266Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 699108..699266 -
1622815546.3461814-CDS-P-fluviatile_contig13:701616..7020601622815546.3461814-CDS-P-fluviatile_contig13:701616..702060Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 701617..702060 -
1693562213.6128592-CDS-P-fluviatile_contig13:701616..7020601693562213.6128592-CDS-P-fluviatile_contig13:701616..702060Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 701617..702060 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1685.1

>prot_P-fluviatile_contig13.1685.1 ID=prot_P-fluviatile_contig13.1685.1|Name=mRNA_P-fluviatile_contig13.1685.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=455bp
MRRVASSFGRCLHTSSTAGARAISTRAVCRNGREFGPSSAWISKNTSGVS
WNASAAATAASPSTSHIRHLSSPSSSDENSSTTTTATEPGKSPPAKAPVK
TLASSEGATPSFLTGPRITSKKGYLERENMIRETQKAIREYYKEGMYQDA
LEVTQRLIDQVDDHFGRKHGVYGSALSDMALMMKSVGRHDEATEIYLKAL
EVYRAVYKGEENASYAHILHNLGMTFRAMADESKKLERIPLMERAAESFG
RCVQIREKLLPNNHPDLQLARSRLAMVQGHLGAEKGRTEARLIAALDGLE
MAVGKENASTANAMTNLALFLKGDGQYAEATELYTTVLETRKKLYGPKHY
DVLVSMHNLSMVHQAAGREDEAVQLQEEISKIGEEMGMTAEEQSEASRAA
EGTAGGPGGAVKLARGEGNETRSARKENKRDNGNSGSAWKPMQTRDRRKS
KRRK*
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mRNA from alignment at P-fluviatile_contig13:696180..702060-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1685.1 ID=mRNA_P-fluviatile_contig13.1685.1|Name=mRNA_P-fluviatile_contig13.1685.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5881bp|location=Sequence derived from alignment at P-fluviatile_contig13:696180..702060- (Porterinema fluviatile SAG_2381)
ATGCGACGTGTAGCAAGCAGTTTCGGCAGATGCCTGCACACGTCATCTAC
GGCAGGGGCCCGGGCTATCTCAACTAGAGCAGTTTGCCGCAATGGCAGGG
AATTTGGACCATCGTCGGCCTGGATTTCCAAAAACACCAGCGGTGTCAGT
TGGAACGCCTCAGCTGCAGCAACAGCAGCGTCACCTTCAACCTCTCATAT
CAGACATCTATCTTCCCCGTCGTCCTCTGATGAGAATTCCAGCACTACCA
CCACAGCGACGGAGCCGGGGAAATCACCTCCGGCGAAGGCTCCAGTGAAG
ACGTTGGCGTCCTCAGAAGGTGCAACTCCGTCGTTCCTGACGGGGCCTCG
AATCACGTCGAAGAAAGGTTACTTGGAACGCGAGAACATGATACGCGAGA
CACAGAAGGCAATTCGAGAGTACTACAAGGAGGGCATGTATCAGGTGAAA
GTAATTCCACTTTTCGCGAGCAAGGTGGCGCCCCTTTCAAGATGACATGT
TACAACAACACAGAACAGATCCGGTAAAGAGCGTTGGGTGTGTGATCACT
CTCCGCCGCTTCGTTAGCGTGCAAATCACTCGCTTGACTTCTGGAGGTTG
TGCAAGTCTTCCAACAATTTCAGTTTTCGTCACCCGCAGTCCTCCTCGTT
TGGGCACGCGGATTGACTACTGTAGTCAACACTCGTGAAGCCTCCCCTGC
TACGCCACACACGGACTTTTCTGTGCCTCTCGTTCGTGGCTAGCCGTGGA
AAACTGCCTCTCGTTTACCGTCAGTAGCAGATATTTTCTGTACAGTAGTG
CAACATCTTTCCACTGCCTCTCGTTTACCGTCAGTAGCAGTTATTTTCTG
TAGAGTAGTGCAACATCTTTCCACTGCCTCTCGTTTACCGTCAGTAGCAG
TTATTTTCTGTACAGTAGTGCAACATCTTTCCACTGCCTCTCGTTTACCG
TCAGTAGCAGTTATTTTCTGTACAGTAGTGCAACATCTTTGTGTATCAGG
CGTTCACCTCTCCGAAGCGGAACGCGAGGGTTCATAACCCAGAGCCTGCA
CATAACGATTCGCATCAAGCTCTGCATACGGGCTTTGAATCGGCGGGCTG
TCTGTGGGGGGAGAAAATCGGGTGGTCAGATGCCAACACCCCGATAAAGC
TGAGGGATGCACGCCATGACTCCTCCTGCACAGGCAGATGACACGGCGGT
TTTCGAACCCCTCATGGATTGGACTTTGAGAACCGTACACAGGAGGACCC
GCCTTCTCGATTTCATTTCGACAAATTCCGGTGAATTTCGCCCCCGGTGC
CACCGCCAAAATGTGACTGCAGCGCCGAATGCGAAGACCGGGTACATGTA
GTTGCAGAATGCCCGTTATACGATCAGGAGAGAGAAGGGTACATGGTTGA
GCTGGAAAAAGTAGACAGTCGGTATAGAGAGAAGTTTGAGGCATGGAACA
AAGAGGAGAAGACGGTAGCGGTACTCGGGTGTAAGATGTGGCCCAGGAAG
GACAGGTATACAGTAGACAGGTTAGGGAAAACATTTTTGAGCCACCTTTG
GCGAAGTAGGAAGGAACGATTGGCCATCGGTGATCGATCCTGCGGGAACA
ATGCTCCTTCCTCTCGAGGACGCGTGGTCATTGGTCTAACGACTGCGGCA
TGCAAAACATGAGTAATCCCCCCCCCTCCCTCCCCCCGGCTTTCACCTCG
GTGTTTGCGATCGGGATTGGGTTTTCGTCGCTTGGCAATGACGTTGTAAA
ACAAGCCAACTCACTCCGTGAACTCGGCAACCAGGTTACCGTCTTTTTTT
TTCCTCTGTGTTTTTTTGGCGGCAACCATAATGGTGGTCGAGAAGATCAT
GTTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAGGGGGATGATCGCACC
ACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACACTGTGCTTA
CAACTGTCTCTGGAAGTGAAAGCACCAGAAAATAGATTAAGCCATACGCA
GCTGTCATCCGTATGCAAGGAAGTAAGCACAAGATGCCGAACACCCTTAG
CAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATACCTCGCGGCGCTT
CGCGCTTGGTGGTGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCG
TCTCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATGC
ACGACTATGAGTCCCCCCTCCCCGGCTCTCACCTCGGTGTTTGCCATCGG
GATTGGGTTTCCGTCGCTTGGCATCGACGTTGTAAAACAAGCCAATTCGC
TTCGTGAACTCGGCAACCAGGTTACCGTCTTTTTTCCCCTCTGTTTTCTT
GTGGCGGTAACCATAGTGGTGGTCGAGAAGATCATGTTGTGCGGGGTAGA
GAACCCTCACTCCGCGCAAGGAAGATGATCGCACCACGTTGTGTTAAAAT
GGTCAAGCACCCTCGAGGCAGTTACACTGTGCTTACAACTGTCTCTGGAA
GTGAAAGAACCAGAAAATAGATTAAGCCATACGCAGCTGTCATCCGTATG
CAAGGAAGTAAGCACAAGATGCCGACCACCCTTAGCAGGATGCAGCGCAC
CCTTCATGCGACTCGCCGAATACCTCACGGCGCTTCGCGCTTGGTGGTGT
GAGAGCCTGGTCCGGTGAGAATACGGCGTGCTCCGTCCCGGCTTTGTAGG
GATGCGAGGTCAATGGTCTAACGACTACGGAATGCACGACTATGAGTCCC
CACCCCCACTGCCGCCGCCGCTTTTCCCTCGTTTCCCCGGACAGGATGCC
CTGGAGGTGACTCAGCGGCTGATAGACCAAGTGGACGACCACTTCGGGAG
GAAGCACGGGGTGTACGGTAGCGCTTTAAGCGACATGGCTCTAATGATGA
AGTCCGTGGGGAGACATGACGAAGCCACTGAAATATACCTGAAGGCTCTC
GAGGTAAGACCCGTGCACCTTGCACCTGTATGGCGCGCGTGCTGCGTTCC
GTCCTCAATCGTCGGGTGGAAACGTCGACCGCTAGGTTGCAGCTTTATCC
ATCGGTAACACAGTGTTTGTGTTCTACGGTGTTGAAGCAGAGCAAGGAAC
CCCTGCTTCACCATCAGGAGCAGATAAGCTCCCGTTGAGGCCTGAAATTG
ATCAACTTCAATGCTTACAGCATATGGAAAGCAGACACTAGTGGACCACA
TCTACAAGAGCCAGGGTTGTGGCAGTCATTCTCCACTACCTGGGGCAGGC
ACGTTTCCTTTGTTGAAATTGAGAGCGAGGGAAGCGATCCCAAGCGACCG
ATTGAGGAGGGAGACAGAGCCACCATGGGTGGTCCGCCCTTCTTCAGATT
TTCATGGAAGAGTTGATTTCCCAAAGGAGTTTCTTGTGCCAGCCATCTCG
AACAATTTATTTGATGGGGGACAGAACGGTAGTCACACCTAGGAAATGGG
GGTTTGGAGGGTTCTCGAAATTCCACCTGATGCTGGTTCGAGTCGCTTTT
CGATGCGCGCTCAGTAAACACGGGGTCATTGAATCTGTAACCAGATGTGG
TGCTCATCAGAGGAAGATACGTGACCATATATCTACGTTTGACCATATAT
CTACGTTTATGTGTGAGATGACGCCCTATCGCTGACGCCATTGCGGAAAA
GAGTGTGACGTCCTAGACAGACGCTAGGATACGCATCCTTTGCAAGGGCA
GGATCTACTTTGTTTACACTTGAGAAAATGACTGCCACACTGACCTCGGT
GTCGCATCTGCAGGGCCTCTGAAATCTTGTTTCCTACGAAAGCACACGGA
AGACCGTTACTCAATGCGCCCCTCGAAGCTTGATAGAAGAAAGCGCTGAC
ATTTCGTTCTTCTGTTACCCCACGTCTTTTCTGCAAAATGCGACAAACCA
ACCAACTAACAGGTTTACAGGGCGGTCTACAAGGGAGAGGAGAACGCCTC
CTACGCCCACATCCTCCACAACCTCGGCATGACGTTTCGCGCGATGGCCG
ACGAGTCGAAGAAGCTCGAGAGGATCCCGCTCATGGAGCGCGCGGCGGAG
TCCTTCGGGCGCTGCGTGCAGATCCGCGAGAAGGTGCGCGATTGTTGCAC
TCCGCACATGGATACACATCCGTGCTGGTGCCACACCAGCAACCCCACCC
CCCACCGCCCTGGAGTTGCTTCCCGATATGCTTTGGTGTTGTGCGGAGAT
GCTGGGCACGCACGAGCATGCATTAAGGCACGGTGAAACGGGGGGCGGGA
GGGATGTACCGGCGCATGGCGTGTTGCGCTGGTAGTGATCGGTGATGCTT
GGATTAATCCAGGTGTCGAGATGTCGGCGTGCACGATGTTCCCCCCTCGA
ATGCCTGTGAACACCAGGACTACTATCAATCAATCTAGCGTCTCTCTGGC
TTATTCTCTTCTGTCATTGCCTTGTTGCCTCTTGGCTCTCTCTCCTGCTG
CCCCTGCGCCCTAACGCACCCGCTCTCTGTCGCTCTCCCCGCCAGCTCCT
GCCCAACAACCACCCCGACCTGCAGCTGGCGCGGAGCCGGCTGGCCATGG
TGCAGGGCCACCTTGGCGCTGAGAAAGGGAGGACAGAGGCCCGCCTGATA
GCCGCGCTGGACGGCCTTGAGATGGCGGTGGGGAAAGAAAACGCGAGCAC
GGCGAATGCCATGACCAACCTTGCCCTGTTCCTGAAGGGGGACGGGCAGT
ACGCGGAGGCGACGGAACTGTACACCACTGTCCTCGAGACAAGGTGCGGC
GATGTTGTGTAGCGAGTGGGATTTTGAGCGGTTGTTTAAATACTCGAGGG
CTGCTTGGATTGCCAATGTGGAGATTATGCCGTTTTTGTGTCCTTGGCGT
ATGAACTGCAAACTACCTCGACGCCCAGCACACGCGGGTTTTGCAGGAAA
GTAGCAGTCCGCCCGTGCCGTCGATGCGTCGCCGTGAATAACAATCGCTT
CGCCGTGAACAACAATCGCTTCGCTTGTGCCTGAGGAGTCTCTCGGTGCG
GACGATATCTTGGCAGGATGTTTGGAGAATTTATAGCATGCTGCCTTAGG
TCCGTTGCGTTGTGCAATCTCGCCTTTAAACCTATTCTTCCTTGAAGCGT
TCGAGGGACATCCCATTGCCCCGATCACGTTTTTGACTCATCGTCTTGTC
TTCAATCACCGCCGCCGCGTGCGTGTGTGTGATCGTGTGTGCGCAAAAAC
GGACAACAATTCGTGCGGAGCTATCGCTGCGAACTCACAACAACCAACCG
ACACCCCCTCCAACCCCGGCGCAGGAAAAAGCTCTACGGTCCGAAGCACT
ACGACGTGCTGGTGTCCATGCACAATCTATCCATGGTGCACCAAGCCGCC
GGCCGGGAGGACGAGGCAGTTCAGCTGCAGGAAGAGATCTCCAAGATCGG
GGAGGAGATGGGGATGACGGCCGAGGAGCAGTCCGAGGCGAGCAGAGCCG
CTGAAGGAACGGCAGGAGGGCCGGGGGGCGCCGTGAAGCTGGCGCGAGGA
GAAGGGAATGAGACTCGATCGGCCAGGAAGGAGAACAAGAGGGACAACGG
CAATTCCGGGTCGGCATGGAAGCCCATGCAGACCCGGGACAGAAGGAAGA
GCAAGAGGAGGAAGTGAAACACTGGCGCACACATTCCCGAGATGGATCGA
GTTGTTAATTTCCTGAGTTTCCTGCTGTGACGTTAAGCGATTTTCTGTGA
AGGCGGTTGTCTCGCAAGACGACGCCGATTGGATGTGCACACGGATGACT
TGTGCCGTCAATGAATACATCGGAACTTGGGGGCTCACCCATAGATTTTT
GTGGTACACGGAAGGACCTAAGAACACGCACGCCGCGTGCATATATTGAT
CTAACGCCATCCATTTCATGCTTAAAATCTC
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:696180..702060-

>mRNA_P-fluviatile_contig13.1685.1 ID=mRNA_P-fluviatile_contig13.1685.1|Name=mRNA_P-fluviatile_contig13.1685.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2730bp|location=Sequence derived from alignment at P-fluviatile_contig13:696180..702060- (Porterinema fluviatile SAG_2381)
ATGCGACGTGTAGCAAGCAGTTTCGGCAGATGCCTGCACACGTCATCTAC
GGCAGGGGCCCGGGCTATCTCAACTAGAGCAGTTTGCCGCAATGGCAGGG
AATTTGGACCATCGTCGGCCTGGATTTCCAAAAACACCAGCGGTGTCAGT
TGGAACGCCTCAGCTGCAGCAACAGCAGCGTCACCTTCAACCTCTCATAT
CAGACATCTATCTTCCCCGTCGTCCTCTGATGAGAATTCCAGCACTACCA
CCACAGCGACGGAGCCGGGGAAATCACCTCCGGCGAAGGCTCCAGTGAAG
ACGTTGGCGTCCTCAGAAGGTGCAACTCCGTCGTTCCTGACGGGGCCTCG
AATCACGTCGAAGAAAGGTTACTTGGAACGCGAGAACATGATACGCGAGA
CACAGAAGGCAATTCGAGAGTACTACAAGGAGGGCATGTATCAGATGCGA
CGTGTAGCAAGCAGTTTCGGCAGATGCCTGCACACGTCATCTACGGCAGG
GGCCCGGGCTATCTCAACTAGAGCAGTTTGCCGCAATGGCAGGGAATTTG
GACCATCGTCGGCCTGGATTTCCAAAAACACCAGCGGTGTCAGTTGGAAC
GCCTCAGCTGCAGCAACAGCAGCGTCACCTTCAACCTCTCATATCAGACA
TCTATCTTCCCCGTCGTCCTCTGATGAGAATTCCAGCACTACCACCACAG
CGACGGAGCCGGGGAAATCACCTCCGGCGAAGGCTCCAGTGAAGACGTTG
GCGTCCTCAGAAGGTGCAACTCCGTCGTTCCTGACGGGGCCTCGAATCAC
GTCGAAGAAAGGTTACTTGGAACGCGAGAACATGATACGCGAGACACAGA
AGGCAATTCGAGAGTACTACAAGGAGGGCATGTATCAGGATGCCCTGGAG
GTGACTCAGCGGCTGATAGACCAAGTGGACGACCACTTCGGGAGGAAGCA
CGGGGTGTACGGTAGCGCTTTAAGCGACATGGCTCTAATGATGAAGTCCG
TGGGGAGACATGACGAAGCCACTGAAATATACCTGAAGGCTCTCGAGGAT
GCCCTGGAGGTGACTCAGCGGCTGATAGACCAAGTGGACGACCACTTCGG
GAGGAAGCACGGGGTGTACGGTAGCGCTTTAAGCGACATGGCTCTAATGA
TGAAGTCCGTGGGGAGACATGACGAAGCCACTGAAATATACCTGAAGGCT
CTCGAGGTTTACAGGGCGGTCTACAAGGGAGAGGAGAACGCCTCCTACGC
CCACATCCTCCACAACCTCGGCATGACGTTTCGCGCGATGGCCGACGAGT
CGAAGAAGCTCGAGAGGATCCCGCTCATGGAGCGCGCGGCGGAGTCCTTC
GGGCGCTGCGTGCAGATCCGCGAGAAGGTTTACAGGGCGGTCTACAAGGG
AGAGGAGAACGCCTCCTACGCCCACATCCTCCACAACCTCGGCATGACGT
TTCGCGCGATGGCCGACGAGTCGAAGAAGCTCGAGAGGATCCCGCTCATG
GAGCGCGCGGCGGAGTCCTTCGGGCGCTGCGTGCAGATCCGCGAGAAGCT
CCTGCCCAACAACCACCCCGACCTGCAGCTGGCGCGGAGCCGGCTGGCCA
TGGTGCAGGGCCACCTTGGCGCTGAGAAAGGGAGGACAGAGGCCCGCCTG
ATAGCCGCGCTGGACGGCCTTGAGATGGCGGTGGGGAAAGAAAACGCGAG
CACGGCGAATGCCATGACCAACCTTGCCCTGTTCCTGAAGGGGGACGGGC
AGTACGCGGAGGCGACGGAACTGTACACCACTGTCCTCGAGACAAGCTCC
TGCCCAACAACCACCCCGACCTGCAGCTGGCGCGGAGCCGGCTGGCCATG
GTGCAGGGCCACCTTGGCGCTGAGAAAGGGAGGACAGAGGCCCGCCTGAT
AGCCGCGCTGGACGGCCTTGAGATGGCGGTGGGGAAAGAAAACGCGAGCA
CGGCGAATGCCATGACCAACCTTGCCCTGTTCCTGAAGGGGGACGGGCAG
TACGCGGAGGCGACGGAACTGTACACCACTGTCCTCGAGACAAGGAAAAA
GCTCTACGGTCCGAAGCACTACGACGTGCTGGTGTCCATGCACAATCTAT
CCATGGTGCACCAAGCCGCCGGCCGGGAGGACGAGGCAGTTCAGCTGCAG
GAAGAGATCTCCAAGATCGGGGAGGAGATGGGGATGACGGCCGAGGAGCA
GTCCGAGGCGAGCAGAGCCGCTGAAGGAACGGCAGGAGGGCCGGGGGGCG
CCGTGAAGCTGGCGCGAGGAGAAGGGAATGAGACTCGATCGGCCAGGAAG
GAGAACAAGAGGGACAACGGCAATTCCGGGTCGGCATGGAAGCCCATGCA
GACCCGGGACAGAAGGAAGAGCAAGAGGAGGAAGTGAGAAAAAGCTCTAC
GGTCCGAAGCACTACGACGTGCTGGTGTCCATGCACAATCTATCCATGGT
GCACCAAGCCGCCGGCCGGGAGGACGAGGCAGTTCAGCTGCAGGAAGAGA
TCTCCAAGATCGGGGAGGAGATGGGGATGACGGCCGAGGAGCAGTCCGAG
GCGAGCAGAGCCGCTGAAGGAACGGCAGGAGGGCCGGGGGGCGCCGTGAA
GCTGGCGCGAGGAGAAGGGAATGAGACTCGATCGGCCAGGAAGGAGAACA
AGAGGGACAACGGCAATTCCGGGTCGGCATGGAAGCCCATGCAGACCCGG
GACAGAAGGAAGAGCAAGAGGAGGAAGTGA
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