mRNA_P-fluviatile_contig13.1621.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1621.1 vs. uniprot
Match: D7FNU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNU3_ECTSI) HSP 1 Score: 437 bits (1123), Expect = 4.550e-135 Identity = 298/599 (49.75%), Postives = 400/599 (66.78%), Query Frame = 1
Query: 13 TKVRGGAAAQPRMESVVTPALSHQN-VRRRGSKKFR---ATSSTQLVESVREVVQAFELEYARARSESIELTELLNERRTQLSDLRRHLEKESAENGTLEAVVQRRTRQNEKGEARLRELEAGFDEILREENFIESRAAAVEAELATFEAEYRGARKKCCLAESYLTRAEANLDERERRLTDLQGLSDTLEASVLHRRQVVAEREALLRSEQEKNARASVLADEAAEEAAALEKEMAELRRELTHKEAESAKATTDLAALKKRASETMARITNDKATRARQLRATEDRMAELKQQIADKHKANAELDGRIKTKELALEAKRSAQXXXXXXXXXXRTSREATVEAEVRLLSEQLQAVGAEMKKAEDSLAEKSELFKKATEEFSSLMADMSVAFREYDRAVTANREMEQDADEIEIALRAFKHQSQRDLLPLRQKCDSLRASNAETRAAIEADRQRIQKLNYILVETQKAVGKAVADIAAKRLLIVACEQRLADGREKIKVKEEIKTRARXXXXXXXXXXXXKVEVSRTRLQKCQAELIEFDAKAAAWTPLPVTLDTSDLRLVEEEARAIAEKEDAASPREAYESRVKALEETLQTIRVGG 1797
TK G +AA R+ES V P + ++RR +KK + A ++ LV+SVREVVQAFELEY++AR+ES+EL +L++ RTQLSDLRRHLEKES+ENGTLEAVVQ R +N G+ARLRELEA F ++L +E I S AAA+E++L F AE++ R K A S+L A+A L +RER L Q SD L A+V R+ VA+RE LLR EQE+ +R+ LA EAA++A ALE E+A LRR+L K +ET RI KATRA L+ +DR+AELKQQ+A K +A ELD R+K + AL A+R XXXXXXXXXX + TV+AEVRLLS+QL AE+ KAE+S+A+ S+ K+A EFS+LMA +S+ FREYD+AVTANR++E DA + E AL+A +SQ DLL L +K D LRASNAE RAA EADR+R ++L +L ++QK V +A A IAAK++L+ ++RL +G +++ K+E KT+A + + SR RL++CQ +I FD +AAAWTP P TL D + VE+EA A ++ AA E++ R++ LEETL TI+ GG
Sbjct: 9 TKTWGRSAASSRVESAVVPVMPAATPIQRRTAKKSKNSNARATVHLVDSVREVVQAFELEYSQARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNTAGDARLRELEAAFKQVLADEGHIASSAAALESDLVVFTAEHKRIRDKTATAASWLDLAQAGLLQRERTLAAAQSESDRLTAAVEAGRRAVADREGLLRGEQERASRSRALAGEAADDAKALESEVAGLRRDLARXXXXXXXXXXXXXXXXKHTAETTVRIAKAKATRAEDLQDAQDRLAELKQQVATKERAKTELDERVKAGQEALVAERXXXXXXXXXXXXXXXXXKETVDAEVRLLSDQLATADAEIVKAEESVAQASDRMKRANAEFSNLMAALSLVFREYDKAVTANRQLELDATDTESALKALSEESQGDLLLLHEKRDRLRASNAELRAAAEADRRRAEELEILLCDSQKGVDEATASIAAKQVLVADTKKRLQEGEARLQAKKERKTQALHAAEGCVAAAEVQAQASRARLEQCQTAVIAFDQEAAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGG 607
BLAST of mRNA_P-fluviatile_contig13.1621.1 vs. uniprot
Match: A0A6H5KW75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW75_9PHAE) HSP 1 Score: 308 bits (790), Expect = 4.470e-86 Identity = 252/623 (40.45%), Postives = 345/623 (55.38%), Query Frame = 1
Query: 10 KTKVRGGAAAQPRMESVVTPALSHQN-VRRRGSKKFR---ATSSTQLVESVREVVQAFELEYARARSESIELTELLNERRTQLSDLRRHLEKESAENGTLEAVVQRRTRQNEKGEARLRELEAGFDEILREENFIESRAAAVEAELATFEAEYRGARKKCCLAESYLTRAEANLDERERRLTDLQGLSDTLEASVLHRRQVVAEREALLRSEQEKNARASVLADEAAEEAAALEKEMAELRRELTHKEAESAKATTDLAALKKRASETMARITNDKATRARQLRATEDRMAELKQQIADKHKANAELDGRIKTKELALEAKR---SAQXXXXXXXXXXRTSREATVEAEVRLLSEQLQAVGAEMKKAEDSLAEKSELFKKATEEFSSLMADMSVAFREYDRAVTANREMEQDADEIEIALRAFKHQSQRDLLPLRQKCDSLRASNAETRAAIEADRQRIQKLNYILVET--------------------QKAVGKAVADIAAKRLLIVACEQRLADGREKIKVKEEIKTRARXXXXXXXXXXXXKVEVSRTRLQKCQAELIEFDAKAAAWTPLPVTLDTSDLRLVEEEARAIAEKEDAASPREAYESRVKALEETLQTIRVGG 1797
KTK G ++ R+ES V P + ++RR +KK + A ++ LV+S AR+ES+EL +L++ RTQLSDLRRHLEKES+ENGTLEAVVQ R +N G+A LRELEA F ++L +E I SRAAA+E++L F AE++ R K A S+L A+A L +RER + + Q SD L A+V R+ VA+REALLR EQE+++R+ LA EAA+EA ALE E+A LRR+L KE E LAA+KK +E +A K +A ELD R++ + AL A+R A+ XXXXXXXX EFS+LMA +S+ FREYD+AVTANR++E DA E E AL+A +S+RDLL L +K D LRASNAE RA +EADR+R ++L I T Q A+ +A A IAAK++L+ +RL +G +++ K+E K +A + + SR RL++CQA +I+FD + AAWTP P TL D + VE+EA A ++ AA E++ R++ LEETL TI+ GG
Sbjct: 8 KTKTWGISS---RVESAVVPVMPAATPIQRRTAKKSKISNARATVHLVDS--------------ARAESVELKAVLDDHRTQLSDLRRHLEKESSENGTLEAVVQHRAARNAAGDASLRELEAMFKQVLADEGHIASRAAALESDLVVFTAEHKCIRNKTATAASWLDLAQAGLLQRERAIAEAQSESDRLTAAVEAGRRTVADREALLRGEQERSSRSRALAGEAADEAKALESEVAGLRRDLARKEEEGXXXXDTLAAIKKHTAE-----------------------------VATKERAKTELDERVQAAQEALVAERVDQKAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAEFSNLMAALSLVFREYDKAVTANRQLELDAAETESALKALSEESERDLLLLHEKRDRLRASNAELRATVEADRRRAEELELIFGTTHSVVVVDDDGFLVVRGPGDSQNALDEATASIAAKQVLVADTRKRLQEGEARLQAKKERKAQALQAAKGGVAAAEVQAQASRARLEQCQASVIKFDRETAAWTPPPATLGEEDRQRVEDEAAAAVQRARAAGGDESHAKRLRDLEETLTTIQEGG 584 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1621.1 >prot_P-fluviatile_contig13.1621.1 ID=prot_P-fluviatile_contig13.1621.1|Name=mRNA_P-fluviatile_contig13.1621.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1014bp MLSKTKVRGGAAAQPRMESVVTPALSHQNVRRRGSKKFRATSSTQLVESVback to top mRNA from alignment at P-fluviatile_contig13:58780..69505- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1621.1 ID=mRNA_P-fluviatile_contig13.1621.1|Name=mRNA_P-fluviatile_contig13.1621.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10726bp|location=Sequence derived from alignment at P-fluviatile_contig13:58780..69505- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:58780..69505- >mRNA_P-fluviatile_contig13.1621.1 ID=mRNA_P-fluviatile_contig13.1621.1|Name=mRNA_P-fluviatile_contig13.1621.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6084bp|location=Sequence derived from alignment at P-fluviatile_contig13:58780..69505- (Porterinema fluviatile SAG_2381)back to top |