prot_P-fluviatile_contig13.1884.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig13.1884.1
Unique Name	prot_P-fluviatile_contig13.1884.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	278

Homology

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BLAST of mRNA_P-fluviatile_contig13.1884.1 vs. uniprot
Match: D8LS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS79_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.390e-45
Identity = 88/139 (63.31%), Postives = 106/139 (76.26%), Query Frame = 0

Query:   30 ASPSLRGAKRAAATPISIALVLTSMTAAALLP-LSGASTSLPSSSSGEICPDETAACFDSPFCWDCVAQFTDGSDFCHERYPVLAAVDA-GCETASALYCCSFDASGQDCVGDAVTMDLFRCALLEGIGCALSDTPCSG 166
            A+P+    K+A ATP+  AL L  + A AL P L+ AST+LPSSS  E+CPDETAAC++S  CWDCVAQF D S++C +R+PVLAA D  GCE ASALYCCSFDASGQDC+ D VT+D FRC +LEG GC LSD+PC G
Sbjct:    7 AAPTCPEIKKARATPLRFALPLLLLVADALRPHLASASTTLPSSS--ELCPDETAACYESTLCWDCVAQFEDSSEYCEDRFPVLAAEDDDGCEAASALYCCSFDASGQDCLDDTVTVDYFRCGVLEGSGCDLSDSPCGG 143

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BLAST of mRNA_P-fluviatile_contig13.1884.1 vs. uniprot
Match: A0A6H5L2W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W4_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.330e-42
Identity = 84/139 (60.43%), Postives = 103/139 (74.10%), Query Frame = 0

Query:   30 ASPSLRGAKRAAATPISIALVLTSMTAAALLP-LSGASTSLPSSSSGEICPDETAACFDSPFCWDCVAQFTDGSDFCHERYPVLAAVDA-GCETASALYCCSFDASGQDCVGDAVTMDLFRCALLEGIGCALSDTPCSG 166
            A+P+    K   ATP+  AL L  + A  L P L+ ASTSLPSSS  E+CPDETAAC++S  CWDCVAQF D S++C +RYPVLAA D  GCE A+ALYCCSFDASG+DC+ D VT+D FRC+++E  GC LSD+PC G
Sbjct:   37 AAPTCPEIKNTRATPLRFALPLLLLVADTLRPHLASASTSLPSSS--ELCPDETAACYESTLCWDCVAQFEDSSEYCEDRYPVLAAEDDDGCEAATALYCCSFDASGEDCLDDTVTVDYFRCSVVEVSGCDLSDSPCGG 173

[Close]

BLAST of mRNA_P-fluviatile_contig13.1884.1 vs. uniprot
Match: A0A6H5JEP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.130e-24
Identity = 69/123 (56.10%), Postives = 82/123 (66.67%), Query Frame = 0

Query:   38 KRAAATPI-----SIALVLTSMTAAALLPLSGASTSLPSSSSGEICPDETAACFDSPFCWDCVAQFT-DGSDFCHERYPVLAAVDAG-CETASALYCCSFDASGQDCVGDAVTMDLFRCALLE 153
            KR AA P+     SI LV+ + T   LL +   STSLPSSSS E C +E AAC+DS  CWDCVAQF  DG D C ERYP ++   A  C+ ASAL+CCSF  SGQDC+ DAVTM+ F+C L E
Sbjct:    6 KRRAAAPLKARVASIFLVINASTI--LLHVGHGSTSLPSSSS-EACVEEAAACYDSALCWDCVAQFAEDGVDSCGERYPAMSNSGASDCDVASALFCCSFYVSGQDCLDDAVTMEFFQCGLEE 125

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig13.1884.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig13.1884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LS79_ECTSI	1.390e-45	63.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L2W4_9PHAE	2.330e-42	60.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JEP0_9PHAE	1.130e-24	56.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..40
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 41..62
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 63..277

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig13	contig	P-fluviatile_contig13:2540657..2550135 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig13.1884.1	mRNA_P-fluviatile_contig13.1884.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig13 2540568..2550771 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig13.1884.1 ID=prot_P-fluviatile_contig13.1884.1|Name=mRNA_P-fluviatile_contig13.1884.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=278bp
MMLVQAADRPWRETRAAAMTPGVDTNRRPASPSLRGAKRAAATPISIALV
LTSMTAAALLPLSGASTSLPSSSSGEICPDETAACFDSPFCWDCVAQFTD
GSDFCHERYPVLAAVDAGCETASALYCCSFDASGQDCVGDAVTMDLFRCA
LLEGIGCALSDTPCSGIGGGGGRPAPSPHSTAPAPVDDDIDGGGDGDGDI
DGDAGTAPSSPAPTPPFASPSPPQSDADSGTLATNGAAGLLAAPPLSWVP
TACWGKSWRAVLLLGALTTAANVAGGL*