prot_P-fluviatile_contig12.1527.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1527.1
Unique Nameprot_P-fluviatile_contig12.1527.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1270
Homology
BLAST of mRNA_P-fluviatile_contig12.1527.1 vs. uniprot
Match: A0A6H5JPU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU6_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 6.210e-49
Identity = 393/1007 (39.03%), Postives = 460/1007 (45.68%), Query Frame = 0
Query:  308 MYHALDRANQRAVLQEQPHVSNFVSKASKDGTGAGAARAAPTXXXXXXXXXXXAAKPAASALEPPSSSTACGVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------RPPGVTQAQHRSIVALKLEKDRKLKDQQRLAAAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------RNISLLSIPVAMHASPPCSPAXXXXXXXXXX-------FHSPXXXXXXXXXXXXXXXXXXXXXXCSDGLRRAAQLALRKNNLMSPTLKRLLLDPSQLQRKAATATVVRAGGDGTEAD---VSSPVSEESGL---DTAGGXXXXXSGRMNPCELRGSTRGSSPWKD-----VDASNSRCLSSGSSSSDRGSSDEEFNDKEKAEWGDGSASGRNLRLATRVLFGQEEAEGRDGAFVKAQPSPKQQRTSVIARAAANASAERYAALEMNPPPPRLSAVAAAVAKMD----------GIA-PNPSPQGG-SVSGPLSCGTPTKGILAERSRLGKDDGAGADSVACSSAVKRRVRFETEEQAREAAAATASLVSPCRSSSSTLATGWGTTSADTDDGEIGVDDGCGGEQWRLLPRRLQVILSTLAASVSVGAVAFLGGGAAGGDGCDWARGTTAVTTPRLACLDTSSFCSAPCLPWLVEYDLDV-CAASAVHSDGIDAGLTVDVLQEDRTTRATELDHATEVAAGASVDATTDELFQDAAGAAVAEDASGEDVFVGVQQGAAEDIGDESVKYVVEXXXXXXXXXXXXXXXXXXXXXXXXXXIGTTADMIE--TDHGRQSSAHDHHPNHLVHSVTGVAGGVPCTSTGASSAASESATSPTETGIQAPPSSTPGGSDPAVAALPASKFASPWGWVEVGAATLGAAAILAAAVWSSRDALVFGGGEGRARGDECGDVGSDPSTPQGGGGNRGGSSEGEELGRYQTLELVKVGGTPATLRSVRRSRRIGSAQKPSSSSGTIIMDLGAAALNLSS 1265
            MYHALDRANQRAVLQEQPHVSNF+  A K     G + + P XXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         RP GVTQAQHRS+VALK+++DR+LKDQQRLA AG+    XXXXXXXXXXXXXXXXXXXXXXXXXXX               ISL  IP AM AS PCSPA                   SP                      CSDGLRRAA+LALRK NLMSPTLKRLL +PSQLQ  A      RAGGD T  D   V SP SEES L   D          GRM P +LRGS   + P+       V   +  CLSS  SSS    SD E  + +    G G+   + ++L  R LF  E  E                                                                  G++ P+ SP GG S+S  +SC TPTKGIL+         G G  +   SS VKRRVRFE EE A   AA  A L SPCRSSSS L+ GWG +                  +W    R    ++S L+ +VSVGAVAFLG             G      P    +   S+     LPWL E    + C  +A             V  E RT     +      AAG  V A  DEL ++                        E+ G+++   VVE                          +G++  ++E  T+    +SA                           +AA  S+ + T    ++P S       PA          S WGW EVGAA  GA A+LAA  W        GGG     G+  G  G  P+TP       GG   GE LGRYQT+ELVK G TPATLRSV+RS RIGS+Q  S  SGT+IMDLG AAL++SS
Sbjct:    1 MYHALDRANQRAVLQEQPHVSNFI--AGKTSKNDGPSSSVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRPAGVTQAQHRSLVALKVQRDRRLKDQQRLATAGVAKSAXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRVLTDAGXXXXXXISLSRIPAAMSASAPCSPATKASTATTAAGGGTCFGLRSPAGSGSGASQIPSPPSSS-----CSDGLRRAARLALRKKNLMSPTLKRLLQNPSQLQTAAH-----RAGGDETRDDGAYVGSPGSEESELGKEDYGRVGGAGSGGRMTPSDLRGSMSWTLPFTARSDSVVGDGSDACLSSYCSSSS--GSDHEGQELD----GGGTTRLKRMKLPNRKLFRPEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLSWPSFSPHGGGSIS--VSC-TPTKGILSG------GPGKGFAATEGSSTVKRRVRFEMEE-AERMAAEEACLASPCRSSSS-LSPGWGGSKXXXXXXXXXXXXXERRGKWSAWLRPF--VVSALSVAVSVGAVAFLG-----------FEGQGKAPGP----VPDGSYSPVRLLPWLEEQPQGLFCPVAAAVEP---------VTSERRTDGGNVVGPVEGEAAG--VLAERDELAEE-----------------------MEEEGEQAAGAVVEDEVA----------------------VGSSGKVVEAGTEEREGASADP-------------------------AAAVRSSATVTRPKYRSPVS-------PAXXXXXXXXXXSMWGWFEVGAAVFGALALLAAVAWRG-----LGGGGVEDCGEFDGGGGEAPATP-----THGGDGGGETLGRYQTVELVKKGDTPATLRSVKRSYRIGSSQA-SPRSGTVIMDLGPAALHMSS 862          
BLAST of mRNA_P-fluviatile_contig12.1527.1 vs. uniprot
Match: D8LPX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX4_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 4.950e-19
Identity = 69/121 (57.02%), Postives = 78/121 (64.46%), Query Frame = 0
Query: 1145 WGWVEVGAATLGAAAILAAAVWSSRDALVFGGGEGRARGDECGDVGSDPSTPQGGGGNRGGSSEGEELGRYQTLELVKVGGTPATLRSVRRSRRIGSAQKPSSSSGTIIMDLGAAALNLSS 1265
            WGW EVGAA  GA A+LAA  W S      GGG     G+  G  G  P+TP       GG   GE LGRYQT+ELVK G TPATLRSV+RS RIGS+Q  S  SGT+IMDLG AAL++SS
Sbjct:  428 WGWFEVGAAVFGALALLAAVAWRS-----LGGGGVEDCGEFDGGGGEAPATP-----THGGDGGGETLGRYQTVELVKKGDTPATLRSVKRSYRIGSSQA-SPRSGTMIMDLGPAALDMSS 537          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPU6_9PHAE6.210e-4939.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPX4_ECTSI4.950e-1957.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024395CLASP N-terminal domainPFAMPF12348CLASP_Ncoord: 214..319
e-value: 5.9E-7
score: 29.3
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 96..332
e-value: 2.9E-16
score: 61.8
NoneNo IPR availablePANTHERPTHR21567:SF9CLIP-ASSOCIATING PROTEINcoord: 232..649
NoneNo IPR availablePANTHERPTHR21567CLASPcoord: 232..649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:2700601..2706627 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1527.1mRNA_P-fluviatile_contig12.1527.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 2700408..2707949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1527.1 ID=prot_P-fluviatile_contig12.1527.1|Name=mRNA_P-fluviatile_contig12.1527.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1270bp
MFVPPSPSQAEDTPVSVRRPKLLYEKAAEMPCGSTRESAAGAEDTETEGR
MVDKRKRSGITAEIQAGAGTAAAEESSGDDLLPETHGILDEEEGTSAISL
SEATKQILDGDDWRATVAVLRQLHDQFAAAAGGALGAEDSGALVPFMESL
AIVCRALKTAKPEIPGAGRVTQLVCAVISGLAKASGNNFCGLAAGIIPDL
LPFLSTPREARCLLYIEDMLAECPAPSVLRAATVPLAGSKTAFLRRKGSG
FLCVAIDRWPRDILRTTLPPIMGQMRKALFDADATVRREGRHTFGVFIRR
WPAEGGGMYHALDRANQRAVLQEQPHVSNFVSKASKDGTGAGAARAAPTA
AAVPAITAITAAKPAASALEPPSSSTACGVSASDDSAAEASSSANAAAAA
AASSAATRAAIATSGGGGGGQRPPGVTQAQHRSIVALKLEKDRKLKDQQR
LAAAGLKKTSSSSSLLSATSCAAVVGASGCGAGGSSGGVGGGGRNISLLS
IPVAMHASPPCSPAAAAGVAGGSGFHSPCSSSSGGGGIGGGASRVAAASS
CSDGLRRAAQLALRKNNLMSPTLKRLLLDPSQLQRKAATATVVRAGGDGT
EADVSSPVSEESGLDTAGGGGGGGSGRMNPCELRGSTRGSSPWKDVDASN
SRCLSSGSSSSDRGSSDEEFNDKEKAEWGDGSASGRNLRLATRVLFGQEE
AEGRDGAFVKAQPSPKQQRTSVIARAAANASAERYAALEMNPPPPRLSAV
AAAVAKMDGIAPNPSPQGGSVSGPLSCGTPTKGILAERSRLGKDDGAGAD
SVACSSAVKRRVRFETEEQAREAAAATASLVSPCRSSSSTLATGWGTTSA
DTDDGEIGVDDGCGGEQWRLLPRRLQVILSTLAASVSVGAVAFLGGGAAG
GDGCDWARGTTAVTTPRLACLDTSSFCSAPCLPWLVEYDLDVCAASAVHS
DGIDAGLTVDVLQEDRTTRATELDHATEVAAGASVDATTDELFQDAAGAA
VAEDASGEDVFVGVQQGAAEDIGDESVKYVVEDVVEGVVQVAAKALTKED
VDILVPDIIGTTADMIETDHGRQSSAHDHHPNHLVHSVTGVAGGVPCTST
GASSAASESATSPTETGIQAPPSSTPGGSDPAVAALPASKFASPWGWVEV
GAATLGAAAILAAAVWSSRDALVFGGGEGRARGDECGDVGSDPSTPQGGG
GNRGGSSEGEELGRYQTLELVKVGGTPATLRSVRRSRRIGSAQKPSSSSG
TIIMDLGAAALNLSSAWEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024395CLASP_N_dom
IPR011989ARM-like